Experiment: m.b. Paraquat dichloride 0.00390625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2415 and B158DRAFT_2416 overlap by 1 nucleotides B158DRAFT_2416 and B158DRAFT_2417 are separated by 2 nucleotides B158DRAFT_2417 and B158DRAFT_2418 are separated by 171 nucleotides B158DRAFT_2418 and B158DRAFT_2419 overlap by 4 nucleotides
B158DRAFT_2415: B158DRAFT_2415 - Tfp pilus assembly protein, tip-associated adhesin PilY1, at 585,894 to 588,968
_2415
B158DRAFT_2416: B158DRAFT_2416 - prepilin-type N-terminal cleavage/methylation domain, at 588,968 to 589,417
_2416
B158DRAFT_2417: B158DRAFT_2417 - prepilin-type N-terminal cleavage/methylation domain, at 589,420 to 589,827
_2417
B158DRAFT_2418: B158DRAFT_2418 - Tfp pilus assembly protein FimT, at 589,999 to 590,562
_2418
B158DRAFT_2419: B158DRAFT_2419 - type IV pilus modification protein PilV, at 590,559 to 591,152
_2419
Position (kb) 589
590 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4
5 at 588.458 kb on - strand, within B158DRAFT_2415 at 588.463 kb on - strand, within B158DRAFT_2415 at 588.586 kb on + strand, within B158DRAFT_2415 at 588.614 kb on + strand, within B158DRAFT_2415 at 588.614 kb on + strand, within B158DRAFT_2415 at 588.614 kb on + strand, within B158DRAFT_2415 at 588.622 kb on - strand, within B158DRAFT_2415 at 588.691 kb on + strand at 588.701 kb on + strand at 588.701 kb on + strand at 588.701 kb on + strand at 588.701 kb on + strand at 588.701 kb on + strand at 588.701 kb on + strand at 588.702 kb on - strand at 588.702 kb on - strand at 588.709 kb on - strand at 588.709 kb on - strand at 588.709 kb on - strand at 588.719 kb on + strand at 588.727 kb on + strand at 588.727 kb on + strand at 588.727 kb on + strand at 588.727 kb on + strand at 588.727 kb on + strand at 588.727 kb on + strand at 588.727 kb on + strand at 588.735 kb on - strand at 588.735 kb on - strand at 588.735 kb on - strand at 588.795 kb on + strand at 588.795 kb on + strand at 588.795 kb on + strand at 588.841 kb on + strand at 588.926 kb on + strand at 588.934 kb on - strand at 589.247 kb on - strand, within B158DRAFT_2416 at 589.329 kb on + strand, within B158DRAFT_2416 at 589.337 kb on - strand, within B158DRAFT_2416 at 589.547 kb on + strand, within B158DRAFT_2417 at 589.596 kb on + strand, within B158DRAFT_2417 at 589.596 kb on + strand, within B158DRAFT_2417 at 589.596 kb on + strand, within B158DRAFT_2417 at 589.596 kb on - strand, within B158DRAFT_2417 at 589.604 kb on - strand, within B158DRAFT_2417 at 589.688 kb on - strand, within B158DRAFT_2417 at 589.688 kb on - strand, within B158DRAFT_2417 at 589.805 kb on - strand at 589.850 kb on + strand at 589.960 kb on - strand at 589.996 kb on + strand at 590.175 kb on + strand, within B158DRAFT_2418 at 590.185 kb on + strand, within B158DRAFT_2418 at 590.193 kb on - strand, within B158DRAFT_2418 at 590.193 kb on - strand, within B158DRAFT_2418 at 590.246 kb on + strand, within B158DRAFT_2418 at 590.271 kb on + strand, within B158DRAFT_2418 at 590.271 kb on + strand, within B158DRAFT_2418 at 590.326 kb on - strand, within B158DRAFT_2418 at 590.441 kb on + strand, within B158DRAFT_2418 at 590.441 kb on + strand, within B158DRAFT_2418 at 590.441 kb on + strand, within B158DRAFT_2418 at 590.441 kb on + strand, within B158DRAFT_2418 at 590.449 kb on - strand, within B158DRAFT_2418 at 590.543 kb on + strand at 590.574 kb on + strand at 590.582 kb on - strand at 590.582 kb on - strand at 590.633 kb on + strand, within B158DRAFT_2419 at 590.704 kb on + strand, within B158DRAFT_2419 at 590.744 kb on + strand, within B158DRAFT_2419
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.00390625 mg/ml remove 588,458 - B158DRAFT_2415 0.83 -0.4 588,463 - B158DRAFT_2415 0.84 -0.1 588,586 + B158DRAFT_2415 0.88 -0.7 588,614 + B158DRAFT_2415 0.88 -1.3 588,614 + B158DRAFT_2415 0.88 -0.8 588,614 + B158DRAFT_2415 0.88 -0.4 588,622 - B158DRAFT_2415 0.89 -0.5 588,691 + +0.4 588,701 + +0.2 588,701 + -0.7 588,701 + -0.3 588,701 + -1.8 588,701 + +0.4 588,701 + +0.3 588,702 - -0.1 588,702 - -0.5 588,709 - -0.4 588,709 - +0.2 588,709 - -1.7 588,719 + -0.8 588,727 + -0.5 588,727 + -0.4 588,727 + -0.7 588,727 + -1.1 588,727 + -0.8 588,727 + -0.4 588,727 + -0.5 588,735 - -0.8 588,735 - +0.1 588,735 - +1.2 588,795 + -0.4 588,795 + -0.3 588,795 + -1.0 588,841 + -0.9 588,926 + -0.6 588,934 - +0.0 589,247 - B158DRAFT_2416 0.62 -2.0 589,329 + B158DRAFT_2416 0.80 +0.1 589,337 - B158DRAFT_2416 0.82 +0.7 589,547 + B158DRAFT_2417 0.31 +0.0 589,596 + B158DRAFT_2417 0.43 +0.4 589,596 + B158DRAFT_2417 0.43 +0.6 589,596 + B158DRAFT_2417 0.43 +0.7 589,596 - B158DRAFT_2417 0.43 +5.0 589,604 - B158DRAFT_2417 0.45 +0.9 589,688 - B158DRAFT_2417 0.66 -0.3 589,688 - B158DRAFT_2417 0.66 +0.4 589,805 - +1.6 589,850 + -0.4 589,960 - +0.9 589,996 + -0.3 590,175 + B158DRAFT_2418 0.31 -0.4 590,185 + B158DRAFT_2418 0.33 +0.1 590,193 - B158DRAFT_2418 0.34 +0.5 590,193 - B158DRAFT_2418 0.34 -0.0 590,246 + B158DRAFT_2418 0.44 +1.3 590,271 + B158DRAFT_2418 0.48 +0.4 590,271 + B158DRAFT_2418 0.48 +0.3 590,326 - B158DRAFT_2418 0.58 +0.1 590,441 + B158DRAFT_2418 0.78 -0.2 590,441 + B158DRAFT_2418 0.78 +0.2 590,441 + B158DRAFT_2418 0.78 -0.5 590,441 + B158DRAFT_2418 0.78 +0.4 590,449 - B158DRAFT_2418 0.80 +0.3 590,543 + +0.2 590,574 + +1.2 590,582 - -0.2 590,582 - +0.1 590,633 + B158DRAFT_2419 0.12 -0.3 590,704 + B158DRAFT_2419 0.24 -1.2 590,744 + B158DRAFT_2419 0.31 -0.5
Or see this region's nucleotide sequence