Experiment: m.b. Paraquat dichloride 0.00390625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2394 and B158DRAFT_2395 are separated by 57 nucleotides B158DRAFT_2395 and B158DRAFT_2396 are separated by 265 nucleotides
B158DRAFT_2394: B158DRAFT_2394 - diguanylate cyclase (GGDEF) domain, at 563,738 to 566,089
_2394
B158DRAFT_2395: B158DRAFT_2395 - phosphoenolpyruvate carboxykinase (ATP), at 566,147 to 567,748
_2395
B158DRAFT_2396: B158DRAFT_2396 - Geranylgeranyl pyrophosphate synthase, at 568,014 to 568,985
_2396
Position (kb) 566
567
568 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 565.226 kb on + strand, within B158DRAFT_2394 at 565.347 kb on - strand, within B158DRAFT_2394 at 565.452 kb on - strand, within B158DRAFT_2394 at 565.539 kb on + strand, within B158DRAFT_2394 at 565.571 kb on + strand, within B158DRAFT_2394 at 565.571 kb on + strand, within B158DRAFT_2394 at 565.571 kb on + strand, within B158DRAFT_2394 at 565.571 kb on + strand, within B158DRAFT_2394 at 565.647 kb on + strand, within B158DRAFT_2394 at 565.704 kb on + strand, within B158DRAFT_2394 at 565.931 kb on + strand at 566.065 kb on - strand at 566.176 kb on - strand at 566.300 kb on + strand at 566.363 kb on + strand, within B158DRAFT_2395 at 566.365 kb on + strand, within B158DRAFT_2395 at 566.368 kb on + strand, within B158DRAFT_2395 at 566.371 kb on - strand, within B158DRAFT_2395 at 566.426 kb on - strand, within B158DRAFT_2395 at 566.446 kb on - strand, within B158DRAFT_2395 at 566.448 kb on + strand, within B158DRAFT_2395 at 566.448 kb on + strand, within B158DRAFT_2395 at 566.448 kb on + strand, within B158DRAFT_2395 at 566.448 kb on + strand, within B158DRAFT_2395 at 566.448 kb on + strand, within B158DRAFT_2395 at 566.448 kb on + strand, within B158DRAFT_2395 at 566.456 kb on - strand, within B158DRAFT_2395 at 566.456 kb on - strand, within B158DRAFT_2395 at 566.456 kb on - strand, within B158DRAFT_2395 at 566.500 kb on + strand, within B158DRAFT_2395 at 566.558 kb on + strand, within B158DRAFT_2395 at 566.593 kb on - strand, within B158DRAFT_2395 at 566.625 kb on - strand, within B158DRAFT_2395 at 566.632 kb on - strand, within B158DRAFT_2395 at 566.718 kb on + strand, within B158DRAFT_2395 at 566.718 kb on + strand, within B158DRAFT_2395 at 566.726 kb on - strand, within B158DRAFT_2395 at 566.990 kb on - strand, within B158DRAFT_2395 at 566.990 kb on - strand, within B158DRAFT_2395 at 566.992 kb on - strand, within B158DRAFT_2395 at 567.014 kb on - strand, within B158DRAFT_2395 at 567.071 kb on + strand, within B158DRAFT_2395 at 567.071 kb on + strand, within B158DRAFT_2395 at 567.084 kb on - strand, within B158DRAFT_2395 at 567.084 kb on - strand, within B158DRAFT_2395 at 567.091 kb on - strand, within B158DRAFT_2395 at 567.130 kb on - strand, within B158DRAFT_2395 at 567.240 kb on - strand, within B158DRAFT_2395 at 567.247 kb on + strand, within B158DRAFT_2395 at 567.255 kb on - strand, within B158DRAFT_2395 at 567.255 kb on - strand, within B158DRAFT_2395 at 567.285 kb on - strand, within B158DRAFT_2395 at 567.449 kb on - strand, within B158DRAFT_2395 at 567.647 kb on + strand at 567.774 kb on + strand at 567.774 kb on + strand at 567.774 kb on + strand at 567.774 kb on + strand at 567.782 kb on - strand at 567.782 kb on - strand at 567.782 kb on - strand at 567.782 kb on - strand at 567.802 kb on + strand at 567.835 kb on + strand at 567.876 kb on - strand at 567.935 kb on + strand at 567.936 kb on + strand at 567.941 kb on + strand at 567.941 kb on + strand at 567.941 kb on + strand at 567.941 kb on + strand at 567.941 kb on + strand at 567.944 kb on - strand at 567.946 kb on + strand at 567.946 kb on + strand at 567.946 kb on + strand at 567.946 kb on + strand at 567.946 kb on + strand at 567.946 kb on + strand at 567.946 kb on + strand at 567.948 kb on + strand at 567.948 kb on + strand at 567.954 kb on - strand at 567.954 kb on - strand at 567.954 kb on - strand at 567.954 kb on - strand at 567.954 kb on - strand at 567.954 kb on - strand at 567.954 kb on - strand at 567.954 kb on - strand at 567.954 kb on - strand at 567.954 kb on - strand at 567.954 kb on - strand at 567.954 kb on - strand at 567.956 kb on - strand at 568.012 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.00390625 mg/ml remove 565,226 + B158DRAFT_2394 0.63 +0.8 565,347 - B158DRAFT_2394 0.68 -0.3 565,452 - B158DRAFT_2394 0.73 +0.2 565,539 + B158DRAFT_2394 0.77 +0.5 565,571 + B158DRAFT_2394 0.78 -0.2 565,571 + B158DRAFT_2394 0.78 -0.8 565,571 + B158DRAFT_2394 0.78 +0.5 565,571 + B158DRAFT_2394 0.78 -0.6 565,647 + B158DRAFT_2394 0.81 -0.8 565,704 + B158DRAFT_2394 0.84 -0.5 565,931 + -0.1 566,065 - +0.1 566,176 - +0.8 566,300 + -1.3 566,363 + B158DRAFT_2395 0.13 +0.3 566,365 + B158DRAFT_2395 0.14 +0.3 566,368 + B158DRAFT_2395 0.14 +0.4 566,371 - B158DRAFT_2395 0.14 +0.3 566,426 - B158DRAFT_2395 0.17 -0.4 566,446 - B158DRAFT_2395 0.19 -1.7 566,448 + B158DRAFT_2395 0.19 -0.5 566,448 + B158DRAFT_2395 0.19 -1.2 566,448 + B158DRAFT_2395 0.19 -0.5 566,448 + B158DRAFT_2395 0.19 -0.9 566,448 + B158DRAFT_2395 0.19 -0.1 566,448 + B158DRAFT_2395 0.19 -0.1 566,456 - B158DRAFT_2395 0.19 -0.5 566,456 - B158DRAFT_2395 0.19 -0.1 566,456 - B158DRAFT_2395 0.19 -0.6 566,500 + B158DRAFT_2395 0.22 +0.7 566,558 + B158DRAFT_2395 0.26 -1.1 566,593 - B158DRAFT_2395 0.28 -0.2 566,625 - B158DRAFT_2395 0.30 +0.3 566,632 - B158DRAFT_2395 0.30 +1.3 566,718 + B158DRAFT_2395 0.36 -1.0 566,718 + B158DRAFT_2395 0.36 -0.0 566,726 - B158DRAFT_2395 0.36 -1.3 566,990 - B158DRAFT_2395 0.53 +0.5 566,990 - B158DRAFT_2395 0.53 -0.6 566,992 - B158DRAFT_2395 0.53 +0.4 567,014 - B158DRAFT_2395 0.54 +1.1 567,071 + B158DRAFT_2395 0.58 +1.1 567,071 + B158DRAFT_2395 0.58 +0.3 567,084 - B158DRAFT_2395 0.58 +0.4 567,084 - B158DRAFT_2395 0.58 -0.2 567,091 - B158DRAFT_2395 0.59 -1.3 567,130 - B158DRAFT_2395 0.61 -0.4 567,240 - B158DRAFT_2395 0.68 +0.6 567,247 + B158DRAFT_2395 0.69 -0.6 567,255 - B158DRAFT_2395 0.69 -0.7 567,255 - B158DRAFT_2395 0.69 +0.5 567,285 - B158DRAFT_2395 0.71 +0.1 567,449 - B158DRAFT_2395 0.81 -1.2 567,647 + +0.0 567,774 + -1.0 567,774 + -1.5 567,774 + -1.1 567,774 + -0.2 567,782 - -0.7 567,782 - -0.8 567,782 - +0.2 567,782 - +1.8 567,802 + -0.1 567,835 + -0.4 567,876 - -0.2 567,935 + -0.8 567,936 + -1.3 567,941 + -1.2 567,941 + +0.2 567,941 + -0.7 567,941 + -1.0 567,941 + -1.2 567,944 - -2.8 567,946 + -0.6 567,946 + -1.8 567,946 + -0.4 567,946 + -1.1 567,946 + +0.1 567,946 + -0.0 567,946 + -1.6 567,948 + +0.1 567,948 + +0.4 567,954 - -0.3 567,954 - -0.1 567,954 - -0.5 567,954 - -0.6 567,954 - -0.3 567,954 - -0.4 567,954 - -0.5 567,954 - +0.0 567,954 - -1.1 567,954 - -0.3 567,954 - +0.0 567,954 - -0.7 567,956 - -1.5 568,012 + -0.3
Or see this region's nucleotide sequence