Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2023

Experiment: m.b. Paraquat dichloride 0.00390625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2022 and B158DRAFT_2023 are separated by 99 nucleotidesB158DRAFT_2023 and B158DRAFT_2024 are separated by 69 nucleotidesB158DRAFT_2024 and B158DRAFT_2025 are separated by 76 nucleotides B158DRAFT_2022: B158DRAFT_2022 - Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases, at 151,723 to 153,150 _2022 B158DRAFT_2023: B158DRAFT_2023 - Zn-dependent hydrolases, including glyoxylases, at 153,250 to 154,173 _2023 B158DRAFT_2024: B158DRAFT_2024 - 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway), at 154,243 to 154,977 _2024 B158DRAFT_2025: B158DRAFT_2025 - Uncharacterized protein conserved in bacteria, at 155,054 to 155,488 _2025 Position (kb) 153 154 155Strain fitness (log2 ratio) -2 -1 0 1 2 3at 152.407 kb on + strand, within B158DRAFT_2022at 152.407 kb on + strand, within B158DRAFT_2022at 152.407 kb on + strand, within B158DRAFT_2022at 152.407 kb on + strand, within B158DRAFT_2022at 152.407 kb on + strand, within B158DRAFT_2022at 152.407 kb on + strand, within B158DRAFT_2022at 152.407 kb on + strand, within B158DRAFT_2022at 152.407 kb on + strand, within B158DRAFT_2022at 152.407 kb on + strand, within B158DRAFT_2022at 152.407 kb on + strand, within B158DRAFT_2022at 152.407 kb on + strand, within B158DRAFT_2022at 152.407 kb on + strand, within B158DRAFT_2022at 152.407 kb on + strand, within B158DRAFT_2022at 152.407 kb on + strand, within B158DRAFT_2022at 152.415 kb on - strand, within B158DRAFT_2022at 152.415 kb on - strand, within B158DRAFT_2022at 152.415 kb on - strand, within B158DRAFT_2022at 152.415 kb on - strand, within B158DRAFT_2022at 152.415 kb on - strand, within B158DRAFT_2022at 152.415 kb on - strand, within B158DRAFT_2022at 152.415 kb on - strand, within B158DRAFT_2022at 152.415 kb on - strand, within B158DRAFT_2022at 152.415 kb on - strand, within B158DRAFT_2022at 152.415 kb on - strand, within B158DRAFT_2022at 152.415 kb on - strand, within B158DRAFT_2022at 152.415 kb on - strand, within B158DRAFT_2022at 152.415 kb on - strand, within B158DRAFT_2022at 152.450 kb on - strand, within B158DRAFT_2022at 152.455 kb on + strand, within B158DRAFT_2022at 152.455 kb on + strand, within B158DRAFT_2022at 152.458 kb on - strand, within B158DRAFT_2022at 152.463 kb on - strand, within B158DRAFT_2022at 152.467 kb on + strand, within B158DRAFT_2022at 152.523 kb on + strand, within B158DRAFT_2022at 152.523 kb on + strand, within B158DRAFT_2022at 152.531 kb on - strand, within B158DRAFT_2022at 152.531 kb on - strand, within B158DRAFT_2022at 152.544 kb on + strand, within B158DRAFT_2022at 152.573 kb on - strand, within B158DRAFT_2022at 152.590 kb on - strand, within B158DRAFT_2022at 152.624 kb on - strand, within B158DRAFT_2022at 152.631 kb on + strand, within B158DRAFT_2022at 152.631 kb on + strand, within B158DRAFT_2022at 152.631 kb on + strand, within B158DRAFT_2022at 152.631 kb on + strand, within B158DRAFT_2022at 152.631 kb on + strand, within B158DRAFT_2022at 152.631 kb on + strand, within B158DRAFT_2022at 152.631 kb on + strand, within B158DRAFT_2022at 152.631 kb on + strand, within B158DRAFT_2022at 152.631 kb on + strand, within B158DRAFT_2022at 152.631 kb on + strand, within B158DRAFT_2022at 152.631 kb on + strand, within B158DRAFT_2022at 152.631 kb on + strand, within B158DRAFT_2022at 152.631 kb on + strand, within B158DRAFT_2022at 152.631 kb on + strand, within B158DRAFT_2022at 152.639 kb on - strand, within B158DRAFT_2022at 152.641 kb on + strand, within B158DRAFT_2022at 152.646 kb on + strand, within B158DRAFT_2022at 152.664 kb on - strand, within B158DRAFT_2022at 152.686 kb on + strand, within B158DRAFT_2022at 152.728 kb on + strand, within B158DRAFT_2022at 152.729 kb on + strand, within B158DRAFT_2022at 152.736 kb on - strand, within B158DRAFT_2022at 152.738 kb on + strand, within B158DRAFT_2022at 152.810 kb on - strand, within B158DRAFT_2022at 152.865 kb on - strand, within B158DRAFT_2022at 152.865 kb on - strand, within B158DRAFT_2022at 152.892 kb on - strand, within B158DRAFT_2022at 152.971 kb on + strand, within B158DRAFT_2022at 152.971 kb on + strand, within B158DRAFT_2022at 152.971 kb on + strand, within B158DRAFT_2022at 152.971 kb on + strand, within B158DRAFT_2022at 152.971 kb on + strand, within B158DRAFT_2022at 152.971 kb on + strand, within B158DRAFT_2022at 152.971 kb on + strand, within B158DRAFT_2022at 152.979 kb on - strand, within B158DRAFT_2022at 152.979 kb on - strand, within B158DRAFT_2022at 152.979 kb on - strand, within B158DRAFT_2022at 153.012 kb on + strandat 153.022 kb on + strandat 153.027 kb on + strandat 153.127 kb on + strandat 153.175 kb on - strandat 153.211 kb on + strandat 153.315 kb on - strandat 153.326 kb on - strandat 153.336 kb on - strandat 153.350 kb on + strand, within B158DRAFT_2023at 153.353 kb on - strand, within B158DRAFT_2023at 153.357 kb on - strand, within B158DRAFT_2023at 153.376 kb on + strand, within B158DRAFT_2023at 153.381 kb on + strand, within B158DRAFT_2023at 153.435 kb on + strand, within B158DRAFT_2023at 153.480 kb on - strand, within B158DRAFT_2023at 153.613 kb on - strand, within B158DRAFT_2023at 153.709 kb on + strand, within B158DRAFT_2023at 153.734 kb on + strand, within B158DRAFT_2023at 153.742 kb on - strand, within B158DRAFT_2023at 153.742 kb on - strand, within B158DRAFT_2023at 153.780 kb on + strand, within B158DRAFT_2023at 153.782 kb on - strand, within B158DRAFT_2023at 153.788 kb on - strand, within B158DRAFT_2023at 153.788 kb on - strand, within B158DRAFT_2023at 153.826 kb on + strand, within B158DRAFT_2023at 153.831 kb on + strand, within B158DRAFT_2023at 153.834 kb on - strand, within B158DRAFT_2023at 153.874 kb on + strand, within B158DRAFT_2023at 153.903 kb on - strand, within B158DRAFT_2023at 153.973 kb on + strand, within B158DRAFT_2023at 154.168 kb on + strandat 154.177 kb on + strandat 154.185 kb on - strandat 154.273 kb on + strandat 154.315 kb on + strandat 154.322 kb on - strand, within B158DRAFT_2024at 154.322 kb on - strand, within B158DRAFT_2024at 154.322 kb on - strand, within B158DRAFT_2024at 154.323 kb on + strand, within B158DRAFT_2024at 154.545 kb on + strand, within B158DRAFT_2024at 154.597 kb on - strand, within B158DRAFT_2024at 154.599 kb on + strand, within B158DRAFT_2024at 154.599 kb on + strand, within B158DRAFT_2024at 154.599 kb on + strand, within B158DRAFT_2024at 154.599 kb on + strand, within B158DRAFT_2024at 154.599 kb on + strand, within B158DRAFT_2024at 154.599 kb on + strand, within B158DRAFT_2024at 154.605 kb on + strand, within B158DRAFT_2024at 154.607 kb on - strand, within B158DRAFT_2024at 154.607 kb on - strand, within B158DRAFT_2024at 154.607 kb on - strand, within B158DRAFT_2024at 154.640 kb on - strand, within B158DRAFT_2024at 154.649 kb on - strand, within B158DRAFT_2024at 154.733 kb on - strand, within B158DRAFT_2024at 154.748 kb on + strand, within B158DRAFT_2024at 154.784 kb on + strand, within B158DRAFT_2024at 154.794 kb on + strand, within B158DRAFT_2024at 154.802 kb on - strand, within B158DRAFT_2024at 154.802 kb on - strand, within B158DRAFT_2024at 154.802 kb on - strand, within B158DRAFT_2024at 154.803 kb on - strand, within B158DRAFT_2024at 154.813 kb on + strand, within B158DRAFT_2024at 154.813 kb on + strand, within B158DRAFT_2024at 154.821 kb on - strand, within B158DRAFT_2024at 154.828 kb on + strand, within B158DRAFT_2024at 154.831 kb on - strand, within B158DRAFT_2024at 154.841 kb on + strand, within B158DRAFT_2024at 154.932 kb on + strandat 155.000 kb on - strandat 155.010 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.00390625 mg/ml
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152,407 + B158DRAFT_2022 0.48 -0.6
152,407 + B158DRAFT_2022 0.48 -1.1
152,407 + B158DRAFT_2022 0.48 -0.3
152,407 + B158DRAFT_2022 0.48 -0.3
152,407 + B158DRAFT_2022 0.48 -0.4
152,407 + B158DRAFT_2022 0.48 +1.0
152,407 + B158DRAFT_2022 0.48 +0.1
152,407 + B158DRAFT_2022 0.48 +0.8
152,407 + B158DRAFT_2022 0.48 -0.2
152,407 + B158DRAFT_2022 0.48 -0.2
152,407 + B158DRAFT_2022 0.48 +0.3
152,407 + B158DRAFT_2022 0.48 -0.3
152,407 + B158DRAFT_2022 0.48 -0.6
152,407 + B158DRAFT_2022 0.48 -0.4
152,415 - B158DRAFT_2022 0.48 -0.7
152,415 - B158DRAFT_2022 0.48 -1.4
152,415 - B158DRAFT_2022 0.48 -0.8
152,415 - B158DRAFT_2022 0.48 +0.1
152,415 - B158DRAFT_2022 0.48 -0.3
152,415 - B158DRAFT_2022 0.48 +0.3
152,415 - B158DRAFT_2022 0.48 -0.7
152,415 - B158DRAFT_2022 0.48 -0.2
152,415 - B158DRAFT_2022 0.48 -0.1
152,415 - B158DRAFT_2022 0.48 -0.3
152,415 - B158DRAFT_2022 0.48 -0.2
152,415 - B158DRAFT_2022 0.48 -0.8
152,415 - B158DRAFT_2022 0.48 -0.3
152,450 - B158DRAFT_2022 0.51 +1.8
152,455 + B158DRAFT_2022 0.51 +0.2
152,455 + B158DRAFT_2022 0.51 -0.3
152,458 - B158DRAFT_2022 0.51 -0.4
152,463 - B158DRAFT_2022 0.52 -0.8
152,467 + B158DRAFT_2022 0.52 -0.8
152,523 + B158DRAFT_2022 0.56 -0.5
152,523 + B158DRAFT_2022 0.56 +0.1
152,531 - B158DRAFT_2022 0.57 -0.3
152,531 - B158DRAFT_2022 0.57 -1.3
152,544 + B158DRAFT_2022 0.57 -0.8
152,573 - B158DRAFT_2022 0.60 -0.1
152,590 - B158DRAFT_2022 0.61 +2.2
152,624 - B158DRAFT_2022 0.63 -0.4
152,631 + B158DRAFT_2022 0.64 -0.3
152,631 + B158DRAFT_2022 0.64 +0.6
152,631 + B158DRAFT_2022 0.64 +0.1
152,631 + B158DRAFT_2022 0.64 +0.1
152,631 + B158DRAFT_2022 0.64 -2.1
152,631 + B158DRAFT_2022 0.64 -0.9
152,631 + B158DRAFT_2022 0.64 -0.6
152,631 + B158DRAFT_2022 0.64 +0.7
152,631 + B158DRAFT_2022 0.64 -1.2
152,631 + B158DRAFT_2022 0.64 -0.8
152,631 + B158DRAFT_2022 0.64 -1.3
152,631 + B158DRAFT_2022 0.64 -0.5
152,631 + B158DRAFT_2022 0.64 -0.5
152,631 + B158DRAFT_2022 0.64 -0.4
152,639 - B158DRAFT_2022 0.64 +0.3
152,641 + B158DRAFT_2022 0.64 +0.2
152,646 + B158DRAFT_2022 0.65 -2.3
152,664 - B158DRAFT_2022 0.66 -1.4
152,686 + B158DRAFT_2022 0.67 -0.4
152,728 + B158DRAFT_2022 0.70 -0.4
152,729 + B158DRAFT_2022 0.70 -0.5
152,736 - B158DRAFT_2022 0.71 +0.3
152,738 + B158DRAFT_2022 0.71 -0.4
152,810 - B158DRAFT_2022 0.76 -0.4
152,865 - B158DRAFT_2022 0.80 -0.6
152,865 - B158DRAFT_2022 0.80 +0.7
152,892 - B158DRAFT_2022 0.82 +0.0
152,971 + B158DRAFT_2022 0.87 +0.7
152,971 + B158DRAFT_2022 0.87 -0.5
152,971 + B158DRAFT_2022 0.87 -0.2
152,971 + B158DRAFT_2022 0.87 +2.1
152,971 + B158DRAFT_2022 0.87 -0.4
152,971 + B158DRAFT_2022 0.87 -0.6
152,971 + B158DRAFT_2022 0.87 -0.4
152,979 - B158DRAFT_2022 0.88 -0.9
152,979 - B158DRAFT_2022 0.88 -0.6
152,979 - B158DRAFT_2022 0.88 +0.2
153,012 + -0.6
153,022 + -0.2
153,027 + -0.3
153,127 + +0.0
153,175 - -0.2
153,211 + -0.2
153,315 - -0.3
153,326 - -0.7
153,336 - -0.1
153,350 + B158DRAFT_2023 0.11 -0.6
153,353 - B158DRAFT_2023 0.11 +0.5
153,357 - B158DRAFT_2023 0.12 -0.2
153,376 + B158DRAFT_2023 0.14 +0.5
153,381 + B158DRAFT_2023 0.14 -0.5
153,435 + B158DRAFT_2023 0.20 -0.8
153,480 - B158DRAFT_2023 0.25 -1.6
153,613 - B158DRAFT_2023 0.39 -0.2
153,709 + B158DRAFT_2023 0.50 +0.6
153,734 + B158DRAFT_2023 0.52 -0.2
153,742 - B158DRAFT_2023 0.53 -0.4
153,742 - B158DRAFT_2023 0.53 -0.7
153,780 + B158DRAFT_2023 0.57 -0.6
153,782 - B158DRAFT_2023 0.58 -0.1
153,788 - B158DRAFT_2023 0.58 +0.0
153,788 - B158DRAFT_2023 0.58 -1.0
153,826 + B158DRAFT_2023 0.62 -1.0
153,831 + B158DRAFT_2023 0.63 -1.0
153,834 - B158DRAFT_2023 0.63 +0.6
153,874 + B158DRAFT_2023 0.68 -0.3
153,903 - B158DRAFT_2023 0.71 -0.4
153,973 + B158DRAFT_2023 0.78 -0.2
154,168 + +0.2
154,177 + +0.2
154,185 - -0.0
154,273 + +1.1
154,315 + -0.5
154,322 - B158DRAFT_2024 0.11 +1.1
154,322 - B158DRAFT_2024 0.11 -1.6
154,322 - B158DRAFT_2024 0.11 -1.1
154,323 + B158DRAFT_2024 0.11 -1.1
154,545 + B158DRAFT_2024 0.41 +3.0
154,597 - B158DRAFT_2024 0.48 -0.6
154,599 + B158DRAFT_2024 0.48 -0.4
154,599 + B158DRAFT_2024 0.48 +0.6
154,599 + B158DRAFT_2024 0.48 -0.7
154,599 + B158DRAFT_2024 0.48 -0.5
154,599 + B158DRAFT_2024 0.48 +0.2
154,599 + B158DRAFT_2024 0.48 -0.6
154,605 + B158DRAFT_2024 0.49 -0.9
154,607 - B158DRAFT_2024 0.50 -0.7
154,607 - B158DRAFT_2024 0.50 -1.1
154,607 - B158DRAFT_2024 0.50 +0.5
154,640 - B158DRAFT_2024 0.54 -1.3
154,649 - B158DRAFT_2024 0.55 -0.3
154,733 - B158DRAFT_2024 0.67 +1.7
154,748 + B158DRAFT_2024 0.69 +1.3
154,784 + B158DRAFT_2024 0.74 -0.1
154,794 + B158DRAFT_2024 0.75 -1.1
154,802 - B158DRAFT_2024 0.76 -0.3
154,802 - B158DRAFT_2024 0.76 +0.2
154,802 - B158DRAFT_2024 0.76 -0.1
154,803 - B158DRAFT_2024 0.76 +0.5
154,813 + B158DRAFT_2024 0.78 +0.9
154,813 + B158DRAFT_2024 0.78 -0.3
154,821 - B158DRAFT_2024 0.79 -0.4
154,828 + B158DRAFT_2024 0.80 +0.3
154,831 - B158DRAFT_2024 0.80 -0.4
154,841 + B158DRAFT_2024 0.81 -0.2
154,932 + -0.9
155,000 - -1.0
155,010 + -0.5

Or see this region's nucleotide sequence