Experiment: m.b. Paraquat dichloride 0.00390625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1650 and B158DRAFT_1651 are separated by 349 nucleotides B158DRAFT_1651 and B158DRAFT_1652 are separated by 54 nucleotides B158DRAFT_1652 and B158DRAFT_1653 are separated by 67 nucleotides
B158DRAFT_1650: B158DRAFT_1650 - hypothetical protein, at 1,720,370 to 1,721,539
_1650
B158DRAFT_1651: B158DRAFT_1651 - hypothetical protein, at 1,721,889 to 1,722,797
_1651
B158DRAFT_1652: B158DRAFT_1652 - hypothetical protein, at 1,722,852 to 1,723,364
_1652
B158DRAFT_1653: B158DRAFT_1653 - Site-specific recombinase XerD, at 1,723,432 to 1,724,169
_1653
Position (kb)
1721
1722
1723 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1720.890 kb on - strand, within B158DRAFT_1650 at 1720.996 kb on + strand, within B158DRAFT_1650 at 1721.110 kb on + strand, within B158DRAFT_1650 at 1721.118 kb on - strand, within B158DRAFT_1650 at 1721.181 kb on + strand, within B158DRAFT_1650 at 1721.181 kb on + strand, within B158DRAFT_1650 at 1721.181 kb on + strand, within B158DRAFT_1650 at 1721.181 kb on + strand, within B158DRAFT_1650 at 1721.189 kb on - strand, within B158DRAFT_1650 at 1721.189 kb on - strand, within B158DRAFT_1650 at 1721.189 kb on - strand, within B158DRAFT_1650 at 1721.189 kb on - strand, within B158DRAFT_1650 at 1721.189 kb on - strand, within B158DRAFT_1650 at 1721.189 kb on - strand, within B158DRAFT_1650 at 1721.217 kb on - strand, within B158DRAFT_1650 at 1721.228 kb on - strand, within B158DRAFT_1650 at 1721.280 kb on - strand, within B158DRAFT_1650 at 1721.343 kb on + strand, within B158DRAFT_1650 at 1721.406 kb on + strand, within B158DRAFT_1650 at 1721.406 kb on - strand, within B158DRAFT_1650 at 1721.580 kb on + strand at 1721.599 kb on + strand at 1721.611 kb on + strand at 1721.613 kb on + strand at 1721.705 kb on + strand at 1721.705 kb on + strand at 1721.723 kb on - strand at 1721.945 kb on - strand at 1722.003 kb on + strand, within B158DRAFT_1651 at 1722.003 kb on + strand, within B158DRAFT_1651 at 1722.008 kb on + strand, within B158DRAFT_1651 at 1722.011 kb on - strand, within B158DRAFT_1651 at 1722.018 kb on + strand, within B158DRAFT_1651 at 1722.046 kb on + strand, within B158DRAFT_1651 at 1722.075 kb on + strand, within B158DRAFT_1651 at 1722.187 kb on - strand, within B158DRAFT_1651 at 1722.188 kb on - strand, within B158DRAFT_1651 at 1722.250 kb on - strand, within B158DRAFT_1651 at 1722.488 kb on + strand, within B158DRAFT_1651 at 1722.559 kb on - strand, within B158DRAFT_1651 at 1722.570 kb on - strand, within B158DRAFT_1651 at 1722.620 kb on + strand, within B158DRAFT_1651 at 1722.630 kb on + strand, within B158DRAFT_1651 at 1722.638 kb on - strand, within B158DRAFT_1651 at 1722.760 kb on - strand at 1722.760 kb on - strand at 1722.762 kb on + strand at 1722.770 kb on - strand at 1722.792 kb on + strand at 1722.802 kb on + strand at 1722.802 kb on + strand at 1722.812 kb on - strand at 1722.836 kb on + strand at 1722.844 kb on - strand at 1722.854 kb on + strand at 1722.862 kb on - strand at 1722.872 kb on + strand at 1722.882 kb on + strand at 1722.890 kb on - strand at 1722.914 kb on + strand, within B158DRAFT_1652 at 1722.940 kb on + strand, within B158DRAFT_1652 at 1722.941 kb on - strand, within B158DRAFT_1652 at 1722.964 kb on + strand, within B158DRAFT_1652 at 1723.025 kb on + strand, within B158DRAFT_1652 at 1723.033 kb on - strand, within B158DRAFT_1652 at 1723.037 kb on + strand, within B158DRAFT_1652 at 1723.038 kb on + strand, within B158DRAFT_1652 at 1723.038 kb on - strand, within B158DRAFT_1652 at 1723.165 kb on - strand, within B158DRAFT_1652 at 1723.212 kb on + strand, within B158DRAFT_1652 at 1723.212 kb on + strand, within B158DRAFT_1652 at 1723.212 kb on + strand, within B158DRAFT_1652 at 1723.220 kb on - strand, within B158DRAFT_1652 at 1723.220 kb on - strand, within B158DRAFT_1652 at 1723.220 kb on - strand, within B158DRAFT_1652 at 1723.220 kb on - strand, within B158DRAFT_1652 at 1723.220 kb on - strand, within B158DRAFT_1652 at 1723.220 kb on - strand, within B158DRAFT_1652 at 1723.227 kb on + strand, within B158DRAFT_1652 at 1723.227 kb on + strand, within B158DRAFT_1652 at 1723.235 kb on - strand, within B158DRAFT_1652 at 1723.235 kb on - strand, within B158DRAFT_1652 at 1723.235 kb on - strand, within B158DRAFT_1652 at 1723.235 kb on - strand, within B158DRAFT_1652 at 1723.235 kb on - strand, within B158DRAFT_1652 at 1723.235 kb on - strand, within B158DRAFT_1652 at 1723.235 kb on - strand, within B158DRAFT_1652 at 1723.297 kb on + strand, within B158DRAFT_1652 at 1723.297 kb on + strand, within B158DRAFT_1652 at 1723.302 kb on + strand, within B158DRAFT_1652 at 1723.302 kb on + strand, within B158DRAFT_1652 at 1723.318 kb on + strand at 1723.318 kb on + strand at 1723.346 kb on + strand at 1723.346 kb on + strand at 1723.346 kb on + strand at 1723.346 kb on + strand at 1723.346 kb on + strand at 1723.346 kb on + strand at 1723.346 kb on + strand at 1723.346 kb on + strand at 1723.346 kb on + strand at 1723.346 kb on + strand at 1723.346 kb on + strand at 1723.346 kb on + strand at 1723.346 kb on + strand at 1723.346 kb on + strand at 1723.346 kb on + strand at 1723.346 kb on + strand at 1723.354 kb on - strand at 1723.354 kb on - strand at 1723.354 kb on - strand at 1723.354 kb on - strand at 1723.354 kb on - strand at 1723.354 kb on - strand at 1723.354 kb on - strand at 1723.354 kb on - strand at 1723.354 kb on - strand at 1723.354 kb on - strand at 1723.354 kb on - strand at 1723.354 kb on - strand at 1723.354 kb on - strand at 1723.354 kb on - strand at 1723.354 kb on - strand at 1723.354 kb on - strand at 1723.354 kb on - strand at 1723.354 kb on - strand at 1723.354 kb on - strand at 1723.359 kb on - strand at 1723.364 kb on - strand at 1723.379 kb on - strand at 1723.495 kb on - strand at 1723.495 kb on - strand at 1723.513 kb on + strand, within B158DRAFT_1653 at 1723.513 kb on + strand, within B158DRAFT_1653 at 1723.513 kb on + strand, within B158DRAFT_1653 at 1723.521 kb on - strand, within B158DRAFT_1653 at 1723.521 kb on - strand, within B158DRAFT_1653 at 1723.521 kb on - strand, within B158DRAFT_1653 at 1723.539 kb on + strand, within B158DRAFT_1653 at 1723.547 kb on - strand, within B158DRAFT_1653 at 1723.625 kb on + strand, within B158DRAFT_1653 at 1723.625 kb on + strand, within B158DRAFT_1653 at 1723.633 kb on - strand, within B158DRAFT_1653 at 1723.640 kb on + strand, within B158DRAFT_1653 at 1723.670 kb on - strand, within B158DRAFT_1653 at 1723.735 kb on + strand, within B158DRAFT_1653 at 1723.743 kb on - strand, within B158DRAFT_1653 at 1723.787 kb on + strand, within B158DRAFT_1653 at 1723.787 kb on + strand, within B158DRAFT_1653 at 1723.787 kb on + strand, within B158DRAFT_1653 at 1723.788 kb on - strand, within B158DRAFT_1653 at 1723.795 kb on - strand, within B158DRAFT_1653 at 1723.795 kb on - strand, within B158DRAFT_1653 at 1723.795 kb on - strand, within B158DRAFT_1653 at 1723.796 kb on - strand, within B158DRAFT_1653
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.00390625 mg/ml remove 1,720,890 - B158DRAFT_1650 0.44 +0.5 1,720,996 + B158DRAFT_1650 0.54 +2.9 1,721,110 + B158DRAFT_1650 0.63 -0.9 1,721,118 - B158DRAFT_1650 0.64 -0.1 1,721,181 + B158DRAFT_1650 0.69 -0.3 1,721,181 + B158DRAFT_1650 0.69 +0.3 1,721,181 + B158DRAFT_1650 0.69 +0.8 1,721,181 + B158DRAFT_1650 0.69 -0.4 1,721,189 - B158DRAFT_1650 0.70 +0.0 1,721,189 - B158DRAFT_1650 0.70 +0.5 1,721,189 - B158DRAFT_1650 0.70 -0.3 1,721,189 - B158DRAFT_1650 0.70 -0.3 1,721,189 - B158DRAFT_1650 0.70 -0.0 1,721,189 - B158DRAFT_1650 0.70 +0.8 1,721,217 - B158DRAFT_1650 0.72 -0.3 1,721,228 - B158DRAFT_1650 0.73 -0.7 1,721,280 - B158DRAFT_1650 0.78 -1.0 1,721,343 + B158DRAFT_1650 0.83 -0.2 1,721,406 + B158DRAFT_1650 0.89 +0.7 1,721,406 - B158DRAFT_1650 0.89 -0.7 1,721,580 + +0.0 1,721,599 + -0.3 1,721,611 + -1.2 1,721,613 + -0.1 1,721,705 + -0.3 1,721,705 + -0.9 1,721,723 - -0.1 1,721,945 - +0.2 1,722,003 + B158DRAFT_1651 0.13 -0.5 1,722,003 + B158DRAFT_1651 0.13 +0.3 1,722,008 + B158DRAFT_1651 0.13 -2.0 1,722,011 - B158DRAFT_1651 0.13 +0.8 1,722,018 + B158DRAFT_1651 0.14 -0.0 1,722,046 + B158DRAFT_1651 0.17 -0.5 1,722,075 + B158DRAFT_1651 0.20 -1.2 1,722,187 - B158DRAFT_1651 0.33 -1.6 1,722,188 - B158DRAFT_1651 0.33 +0.1 1,722,250 - B158DRAFT_1651 0.40 -0.5 1,722,488 + B158DRAFT_1651 0.66 +0.6 1,722,559 - B158DRAFT_1651 0.74 +0.2 1,722,570 - B158DRAFT_1651 0.75 -0.1 1,722,620 + B158DRAFT_1651 0.80 -0.7 1,722,630 + B158DRAFT_1651 0.82 -0.2 1,722,638 - B158DRAFT_1651 0.82 -0.3 1,722,760 - +0.3 1,722,760 - -0.6 1,722,762 + -0.3 1,722,770 - -0.5 1,722,792 + +0.7 1,722,802 + +0.3 1,722,802 + -0.8 1,722,812 - -0.5 1,722,836 + -1.0 1,722,844 - -1.2 1,722,854 + +0.3 1,722,862 - -0.3 1,722,872 + -0.9 1,722,882 + -1.1 1,722,890 - -0.1 1,722,914 + B158DRAFT_1652 0.12 +0.5 1,722,940 + B158DRAFT_1652 0.17 +0.4 1,722,941 - B158DRAFT_1652 0.17 -0.3 1,722,964 + B158DRAFT_1652 0.22 -0.5 1,723,025 + B158DRAFT_1652 0.34 -0.3 1,723,033 - B158DRAFT_1652 0.35 +0.4 1,723,037 + B158DRAFT_1652 0.36 -0.8 1,723,038 + B158DRAFT_1652 0.36 +0.3 1,723,038 - B158DRAFT_1652 0.36 -0.8 1,723,165 - B158DRAFT_1652 0.61 +0.4 1,723,212 + B158DRAFT_1652 0.70 +1.8 1,723,212 + B158DRAFT_1652 0.70 -0.7 1,723,212 + B158DRAFT_1652 0.70 -1.1 1,723,220 - B158DRAFT_1652 0.72 -0.6 1,723,220 - B158DRAFT_1652 0.72 -0.4 1,723,220 - B158DRAFT_1652 0.72 -0.1 1,723,220 - B158DRAFT_1652 0.72 +0.2 1,723,220 - B158DRAFT_1652 0.72 -2.0 1,723,220 - B158DRAFT_1652 0.72 +0.4 1,723,227 + B158DRAFT_1652 0.73 +0.2 1,723,227 + B158DRAFT_1652 0.73 -0.2 1,723,235 - B158DRAFT_1652 0.75 -0.7 1,723,235 - B158DRAFT_1652 0.75 -0.1 1,723,235 - B158DRAFT_1652 0.75 +0.1 1,723,235 - B158DRAFT_1652 0.75 -0.7 1,723,235 - B158DRAFT_1652 0.75 +0.1 1,723,235 - B158DRAFT_1652 0.75 -0.5 1,723,235 - B158DRAFT_1652 0.75 -0.0 1,723,297 + B158DRAFT_1652 0.87 -0.1 1,723,297 + B158DRAFT_1652 0.87 +0.6 1,723,302 + B158DRAFT_1652 0.88 -0.2 1,723,302 + B158DRAFT_1652 0.88 -0.3 1,723,318 + -1.1 1,723,318 + +0.9 1,723,346 + +1.5 1,723,346 + -0.3 1,723,346 + +0.4 1,723,346 + -0.1 1,723,346 + +0.7 1,723,346 + +0.5 1,723,346 + +0.2 1,723,346 + -1.1 1,723,346 + -0.2 1,723,346 + -0.0 1,723,346 + -1.3 1,723,346 + -1.4 1,723,346 + -0.3 1,723,346 + -0.4 1,723,346 + -0.3 1,723,346 + -0.3 1,723,354 - +0.4 1,723,354 - +1.0 1,723,354 - -0.3 1,723,354 - +0.2 1,723,354 - +0.1 1,723,354 - -0.3 1,723,354 - -0.9 1,723,354 - +0.1 1,723,354 - +0.7 1,723,354 - +0.0 1,723,354 - -1.6 1,723,354 - +0.8 1,723,354 - -0.4 1,723,354 - +0.1 1,723,354 - +0.2 1,723,354 - -0.5 1,723,354 - -0.3 1,723,354 - +0.2 1,723,354 - +0.0 1,723,359 - -0.0 1,723,364 - +0.2 1,723,379 - +0.1 1,723,495 - -0.1 1,723,495 - -0.4 1,723,513 + B158DRAFT_1653 0.11 -0.5 1,723,513 + B158DRAFT_1653 0.11 -0.5 1,723,513 + B158DRAFT_1653 0.11 +3.1 1,723,521 - B158DRAFT_1653 0.12 -0.1 1,723,521 - B158DRAFT_1653 0.12 +0.3 1,723,521 - B158DRAFT_1653 0.12 +0.9 1,723,539 + B158DRAFT_1653 0.14 -0.1 1,723,547 - B158DRAFT_1653 0.16 +1.0 1,723,625 + B158DRAFT_1653 0.26 -0.1 1,723,625 + B158DRAFT_1653 0.26 -0.3 1,723,633 - B158DRAFT_1653 0.27 -0.5 1,723,640 + B158DRAFT_1653 0.28 -0.2 1,723,670 - B158DRAFT_1653 0.32 +0.1 1,723,735 + B158DRAFT_1653 0.41 -0.9 1,723,743 - B158DRAFT_1653 0.42 +0.8 1,723,787 + B158DRAFT_1653 0.48 +1.4 1,723,787 + B158DRAFT_1653 0.48 +0.3 1,723,787 + B158DRAFT_1653 0.48 +0.0 1,723,788 - B158DRAFT_1653 0.48 -0.5 1,723,795 - B158DRAFT_1653 0.49 -1.1 1,723,795 - B158DRAFT_1653 0.49 -2.2 1,723,795 - B158DRAFT_1653 0.49 -0.3 1,723,796 - B158DRAFT_1653 0.49 -0.2
Or see this region's nucleotide sequence