Experiment: m.b. Paraquat dichloride 0.00390625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1354 and B158DRAFT_1355 are separated by 306 nucleotides B158DRAFT_1355 and B158DRAFT_1356 are separated by 103 nucleotides
B158DRAFT_1354: B158DRAFT_1354 - Glycine/D-amino acid oxidases (deaminating), at 1,398,505 to 1,399,788
_1354
B158DRAFT_1355: B158DRAFT_1355 - hypothetical protein, at 1,400,095 to 1,400,514
_1355
B158DRAFT_1356: B158DRAFT_1356 - CAAX amino terminal protease family., at 1,400,618 to 1,401,205
_1356
Position (kb)
1398
1399
1400 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 1397.527 kb on - strand at 1397.529 kb on + strand at 1397.574 kb on - strand at 1397.645 kb on + strand at 1397.670 kb on + strand at 1397.763 kb on - strand at 1397.874 kb on + strand at 1397.880 kb on - strand at 1397.882 kb on - strand at 1397.882 kb on - strand at 1397.882 kb on - strand at 1397.882 kb on - strand at 1397.887 kb on - strand at 1397.917 kb on + strand at 1397.922 kb on + strand at 1397.925 kb on - strand at 1397.979 kb on + strand at 1398.031 kb on + strand at 1398.032 kb on + strand at 1398.040 kb on - strand at 1398.040 kb on - strand at 1398.078 kb on + strand at 1398.078 kb on + strand at 1398.078 kb on + strand at 1398.130 kb on + strand at 1398.135 kb on + strand at 1398.138 kb on - strand at 1398.143 kb on - strand at 1398.144 kb on + strand at 1398.144 kb on + strand at 1398.144 kb on + strand at 1398.146 kb on + strand at 1398.152 kb on - strand at 1398.152 kb on - strand at 1398.152 kb on - strand at 1398.153 kb on - strand at 1398.320 kb on - strand at 1398.350 kb on + strand at 1398.363 kb on - strand at 1398.363 kb on - strand at 1398.445 kb on - strand at 1398.466 kb on - strand at 1398.466 kb on - strand at 1398.466 kb on - strand at 1398.485 kb on + strand at 1398.523 kb on + strand at 1398.575 kb on - strand at 1398.595 kb on + strand at 1398.610 kb on - strand at 1398.684 kb on - strand, within B158DRAFT_1354 at 1398.689 kb on - strand, within B158DRAFT_1354 at 1398.689 kb on - strand, within B158DRAFT_1354 at 1398.689 kb on - strand, within B158DRAFT_1354 at 1398.702 kb on + strand, within B158DRAFT_1354 at 1398.703 kb on + strand, within B158DRAFT_1354 at 1398.703 kb on + strand, within B158DRAFT_1354 at 1398.711 kb on - strand, within B158DRAFT_1354 at 1398.711 kb on - strand, within B158DRAFT_1354 at 1398.748 kb on + strand, within B158DRAFT_1354 at 1398.760 kb on + strand, within B158DRAFT_1354 at 1398.760 kb on + strand, within B158DRAFT_1354 at 1398.777 kb on - strand, within B158DRAFT_1354 at 1398.803 kb on + strand, within B158DRAFT_1354 at 1398.811 kb on - strand, within B158DRAFT_1354 at 1398.811 kb on - strand, within B158DRAFT_1354 at 1399.047 kb on + strand, within B158DRAFT_1354 at 1399.060 kb on - strand, within B158DRAFT_1354 at 1399.132 kb on + strand, within B158DRAFT_1354 at 1399.201 kb on - strand, within B158DRAFT_1354 at 1399.261 kb on - strand, within B158DRAFT_1354 at 1399.284 kb on + strand, within B158DRAFT_1354 at 1399.289 kb on + strand, within B158DRAFT_1354 at 1399.289 kb on + strand, within B158DRAFT_1354 at 1399.289 kb on + strand, within B158DRAFT_1354 at 1399.289 kb on + strand, within B158DRAFT_1354 at 1399.289 kb on + strand, within B158DRAFT_1354 at 1399.289 kb on + strand, within B158DRAFT_1354 at 1399.289 kb on + strand, within B158DRAFT_1354 at 1399.289 kb on + strand, within B158DRAFT_1354 at 1399.289 kb on + strand, within B158DRAFT_1354 at 1399.297 kb on - strand, within B158DRAFT_1354 at 1399.297 kb on - strand, within B158DRAFT_1354 at 1399.297 kb on - strand, within B158DRAFT_1354 at 1399.297 kb on - strand, within B158DRAFT_1354 at 1399.297 kb on - strand, within B158DRAFT_1354 at 1399.297 kb on - strand, within B158DRAFT_1354 at 1399.297 kb on - strand, within B158DRAFT_1354 at 1399.297 kb on - strand, within B158DRAFT_1354 at 1399.297 kb on - strand, within B158DRAFT_1354 at 1399.297 kb on - strand, within B158DRAFT_1354 at 1399.297 kb on - strand, within B158DRAFT_1354 at 1399.345 kb on - strand, within B158DRAFT_1354 at 1399.428 kb on + strand, within B158DRAFT_1354 at 1399.479 kb on - strand, within B158DRAFT_1354 at 1399.525 kb on - strand, within B158DRAFT_1354 at 1399.525 kb on - strand, within B158DRAFT_1354 at 1399.547 kb on - strand, within B158DRAFT_1354 at 1399.584 kb on + strand, within B158DRAFT_1354 at 1399.584 kb on + strand, within B158DRAFT_1354 at 1399.592 kb on - strand, within B158DRAFT_1354 at 1399.592 kb on - strand, within B158DRAFT_1354 at 1399.628 kb on + strand, within B158DRAFT_1354 at 1399.628 kb on + strand, within B158DRAFT_1354 at 1399.633 kb on + strand, within B158DRAFT_1354 at 1399.654 kb on + strand, within B158DRAFT_1354 at 1399.666 kb on + strand at 1399.666 kb on + strand at 1399.674 kb on - strand at 1399.689 kb on + strand at 1399.689 kb on + strand at 1399.699 kb on + strand at 1399.699 kb on + strand at 1399.699 kb on + strand at 1399.707 kb on - strand at 1399.834 kb on + strand at 1399.834 kb on + strand at 1399.834 kb on + strand at 1399.842 kb on - strand at 1399.842 kb on - strand at 1399.842 kb on - strand at 1399.879 kb on - strand at 1399.879 kb on - strand at 1399.879 kb on - strand at 1399.881 kb on + strand at 1400.012 kb on - strand at 1400.029 kb on - strand at 1400.031 kb on + strand at 1400.031 kb on + strand at 1400.031 kb on + strand at 1400.031 kb on + strand at 1400.031 kb on + strand at 1400.031 kb on + strand at 1400.039 kb on - strand at 1400.039 kb on - strand at 1400.039 kb on - strand at 1400.039 kb on - strand at 1400.047 kb on + strand at 1400.055 kb on - strand at 1400.127 kb on + strand at 1400.129 kb on + strand at 1400.129 kb on + strand at 1400.129 kb on + strand at 1400.129 kb on + strand at 1400.129 kb on + strand at 1400.129 kb on + strand at 1400.129 kb on + strand at 1400.129 kb on + strand at 1400.129 kb on + strand at 1400.129 kb on + strand at 1400.137 kb on - strand, within B158DRAFT_1355 at 1400.137 kb on - strand, within B158DRAFT_1355 at 1400.137 kb on - strand, within B158DRAFT_1355 at 1400.137 kb on - strand, within B158DRAFT_1355 at 1400.137 kb on - strand, within B158DRAFT_1355 at 1400.137 kb on - strand, within B158DRAFT_1355 at 1400.137 kb on - strand, within B158DRAFT_1355 at 1400.148 kb on - strand, within B158DRAFT_1355 at 1400.214 kb on - strand, within B158DRAFT_1355 at 1400.385 kb on + strand, within B158DRAFT_1355 at 1400.388 kb on - strand, within B158DRAFT_1355 at 1400.467 kb on - strand, within B158DRAFT_1355 at 1400.533 kb on + strand at 1400.582 kb on + strand at 1400.582 kb on + strand at 1400.583 kb on - strand at 1400.590 kb on - strand at 1400.590 kb on - strand at 1400.590 kb on - strand at 1400.590 kb on - strand at 1400.590 kb on - strand at 1400.652 kb on - strand at 1400.667 kb on - strand at 1400.670 kb on + strand at 1400.747 kb on + strand, within B158DRAFT_1356 at 1400.747 kb on + strand, within B158DRAFT_1356
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.00390625 mg/ml remove 1,397,527 - -0.7 1,397,529 + -0.8 1,397,574 - +0.4 1,397,645 + -1.5 1,397,670 + -0.8 1,397,763 - -0.3 1,397,874 + -0.3 1,397,880 - -0.3 1,397,882 - -0.6 1,397,882 - -0.2 1,397,882 - +0.0 1,397,882 - -0.3 1,397,887 - -0.7 1,397,917 + -0.6 1,397,922 + +0.5 1,397,925 - -0.3 1,397,979 + -0.3 1,398,031 + +0.1 1,398,032 + -1.3 1,398,040 - -0.3 1,398,040 - -0.5 1,398,078 + +0.3 1,398,078 + -0.4 1,398,078 + -0.8 1,398,130 + -0.7 1,398,135 + +0.1 1,398,138 - -0.7 1,398,143 - -1.1 1,398,144 + -0.6 1,398,144 + +0.5 1,398,144 + -0.8 1,398,146 + -0.4 1,398,152 - -0.1 1,398,152 - -0.4 1,398,152 - +0.4 1,398,153 - +0.1 1,398,320 - -0.7 1,398,350 + -0.3 1,398,363 - +0.7 1,398,363 - -0.4 1,398,445 - -0.7 1,398,466 - -0.2 1,398,466 - +0.3 1,398,466 - -0.8 1,398,485 + -0.7 1,398,523 + -0.0 1,398,575 - -0.0 1,398,595 + -0.8 1,398,610 - -0.5 1,398,684 - B158DRAFT_1354 0.14 +0.4 1,398,689 - B158DRAFT_1354 0.14 +1.3 1,398,689 - B158DRAFT_1354 0.14 +4.0 1,398,689 - B158DRAFT_1354 0.14 -1.0 1,398,702 + B158DRAFT_1354 0.15 -1.2 1,398,703 + B158DRAFT_1354 0.15 -1.0 1,398,703 + B158DRAFT_1354 0.15 +0.0 1,398,711 - B158DRAFT_1354 0.16 -0.4 1,398,711 - B158DRAFT_1354 0.16 +2.3 1,398,748 + B158DRAFT_1354 0.19 +0.2 1,398,760 + B158DRAFT_1354 0.20 +0.1 1,398,760 + B158DRAFT_1354 0.20 -0.2 1,398,777 - B158DRAFT_1354 0.21 -0.6 1,398,803 + B158DRAFT_1354 0.23 -0.6 1,398,811 - B158DRAFT_1354 0.24 -0.1 1,398,811 - B158DRAFT_1354 0.24 -0.7 1,399,047 + B158DRAFT_1354 0.42 -0.4 1,399,060 - B158DRAFT_1354 0.43 -0.6 1,399,132 + B158DRAFT_1354 0.49 -0.1 1,399,201 - B158DRAFT_1354 0.54 +0.6 1,399,261 - B158DRAFT_1354 0.59 -1.2 1,399,284 + B158DRAFT_1354 0.61 -0.2 1,399,289 + B158DRAFT_1354 0.61 +3.7 1,399,289 + B158DRAFT_1354 0.61 -0.5 1,399,289 + B158DRAFT_1354 0.61 -0.3 1,399,289 + B158DRAFT_1354 0.61 -0.9 1,399,289 + B158DRAFT_1354 0.61 +1.5 1,399,289 + B158DRAFT_1354 0.61 -0.2 1,399,289 + B158DRAFT_1354 0.61 -0.5 1,399,289 + B158DRAFT_1354 0.61 -0.3 1,399,289 + B158DRAFT_1354 0.61 -0.6 1,399,297 - B158DRAFT_1354 0.62 -0.9 1,399,297 - B158DRAFT_1354 0.62 -0.7 1,399,297 - B158DRAFT_1354 0.62 -1.1 1,399,297 - B158DRAFT_1354 0.62 -1.5 1,399,297 - B158DRAFT_1354 0.62 +0.2 1,399,297 - B158DRAFT_1354 0.62 -0.1 1,399,297 - B158DRAFT_1354 0.62 +0.9 1,399,297 - B158DRAFT_1354 0.62 -0.5 1,399,297 - B158DRAFT_1354 0.62 -0.2 1,399,297 - B158DRAFT_1354 0.62 -0.9 1,399,297 - B158DRAFT_1354 0.62 +0.6 1,399,345 - B158DRAFT_1354 0.65 -0.2 1,399,428 + B158DRAFT_1354 0.72 -1.9 1,399,479 - B158DRAFT_1354 0.76 -0.9 1,399,525 - B158DRAFT_1354 0.79 -0.3 1,399,525 - B158DRAFT_1354 0.79 -0.7 1,399,547 - B158DRAFT_1354 0.81 +0.6 1,399,584 + B158DRAFT_1354 0.84 -0.7 1,399,584 + B158DRAFT_1354 0.84 -0.4 1,399,592 - B158DRAFT_1354 0.85 -0.4 1,399,592 - B158DRAFT_1354 0.85 -0.3 1,399,628 + B158DRAFT_1354 0.87 -1.3 1,399,628 + B158DRAFT_1354 0.87 -0.8 1,399,633 + B158DRAFT_1354 0.88 -0.5 1,399,654 + B158DRAFT_1354 0.89 +0.5 1,399,666 + -0.4 1,399,666 + -0.4 1,399,674 - -0.5 1,399,689 + +0.3 1,399,689 + +0.8 1,399,699 + -0.4 1,399,699 + +0.2 1,399,699 + -0.2 1,399,707 - -1.0 1,399,834 + -0.3 1,399,834 + +0.8 1,399,834 + -0.5 1,399,842 - +0.1 1,399,842 - -0.8 1,399,842 - -1.0 1,399,879 - -0.5 1,399,879 - -0.0 1,399,879 - -0.3 1,399,881 + -0.2 1,400,012 - -0.5 1,400,029 - +0.7 1,400,031 + -0.0 1,400,031 + +0.2 1,400,031 + -2.0 1,400,031 + -0.2 1,400,031 + -1.5 1,400,031 + +0.8 1,400,039 - -0.5 1,400,039 - -0.1 1,400,039 - +0.3 1,400,039 - -0.0 1,400,047 + +0.1 1,400,055 - -1.5 1,400,127 + -0.1 1,400,129 + -0.4 1,400,129 + -0.8 1,400,129 + +4.3 1,400,129 + +0.5 1,400,129 + +0.1 1,400,129 + +0.3 1,400,129 + -0.3 1,400,129 + -0.5 1,400,129 + -0.5 1,400,129 + -0.5 1,400,137 - B158DRAFT_1355 0.10 -0.3 1,400,137 - B158DRAFT_1355 0.10 +0.1 1,400,137 - B158DRAFT_1355 0.10 -0.5 1,400,137 - B158DRAFT_1355 0.10 -0.0 1,400,137 - B158DRAFT_1355 0.10 -0.0 1,400,137 - B158DRAFT_1355 0.10 -0.8 1,400,137 - B158DRAFT_1355 0.10 +0.5 1,400,148 - B158DRAFT_1355 0.13 +0.8 1,400,214 - B158DRAFT_1355 0.28 -0.3 1,400,385 + B158DRAFT_1355 0.69 +0.8 1,400,388 - B158DRAFT_1355 0.70 -0.8 1,400,467 - B158DRAFT_1355 0.89 -0.3 1,400,533 + +0.3 1,400,582 + -0.2 1,400,582 + -0.3 1,400,583 - -0.2 1,400,590 - +1.8 1,400,590 - -0.9 1,400,590 - -0.6 1,400,590 - -0.3 1,400,590 - +0.6 1,400,652 - -1.8 1,400,667 - -1.1 1,400,670 + +1.1 1,400,747 + B158DRAFT_1356 0.22 +0.2 1,400,747 + B158DRAFT_1356 0.22 +0.4
Or see this region's nucleotide sequence