Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1195

Experiment: m.b. Paraquat dichloride 0.00390625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1193 and B158DRAFT_1194 are separated by 122 nucleotidesB158DRAFT_1194 and B158DRAFT_1195 are separated by 18 nucleotidesB158DRAFT_1195 and B158DRAFT_1196 overlap by 4 nucleotidesB158DRAFT_1196 and B158DRAFT_1197 are separated by 74 nucleotides B158DRAFT_1193: B158DRAFT_1193 - hypothetical protein, at 1,232,381 to 1,233,805 _1193 B158DRAFT_1194: B158DRAFT_1194 - hypothetical protein, at 1,233,928 to 1,234,545 _1194 B158DRAFT_1195: B158DRAFT_1195 - 1,4-dihydroxy-2-naphthoate octaprenyltransferase, at 1,234,564 to 1,235,463 _1195 B158DRAFT_1196: B158DRAFT_1196 - Uncharacterized protein conserved in bacteria, at 1,235,460 to 1,235,945 _1196 B158DRAFT_1197: B158DRAFT_1197 - ABC-type multidrug transport system, ATPase component, at 1,236,020 to 1,236,865 _1197 Position (kb) 1234 1235 1236Strain fitness (log2 ratio) -1 0 1 2 3 4 5at 1233.667 kb on - strandat 1233.709 kb on + strandat 1233.712 kb on - strandat 1233.858 kb on + strandat 1233.858 kb on + strandat 1233.858 kb on + strandat 1233.866 kb on - strandat 1233.868 kb on + strandat 1234.068 kb on + strand, within B158DRAFT_1194at 1234.075 kb on - strand, within B158DRAFT_1194at 1234.094 kb on - strand, within B158DRAFT_1194at 1234.096 kb on + strand, within B158DRAFT_1194at 1234.104 kb on - strand, within B158DRAFT_1194at 1234.106 kb on + strand, within B158DRAFT_1194at 1234.114 kb on - strand, within B158DRAFT_1194at 1234.168 kb on - strand, within B158DRAFT_1194at 1234.172 kb on + strand, within B158DRAFT_1194at 1234.172 kb on + strand, within B158DRAFT_1194at 1234.180 kb on - strand, within B158DRAFT_1194at 1234.180 kb on - strand, within B158DRAFT_1194at 1234.267 kb on - strand, within B158DRAFT_1194at 1234.407 kb on - strand, within B158DRAFT_1194at 1234.424 kb on + strand, within B158DRAFT_1194at 1234.561 kb on + strandat 1234.561 kb on + strandat 1234.561 kb on + strandat 1234.569 kb on - strandat 1234.569 kb on - strandat 1234.672 kb on - strand, within B158DRAFT_1195at 1234.834 kb on - strand, within B158DRAFT_1195at 1234.846 kb on + strand, within B158DRAFT_1195at 1235.022 kb on - strand, within B158DRAFT_1195at 1235.037 kb on - strand, within B158DRAFT_1195at 1235.070 kb on + strand, within B158DRAFT_1195at 1235.078 kb on - strand, within B158DRAFT_1195at 1235.078 kb on - strand, within B158DRAFT_1195at 1235.213 kb on + strand, within B158DRAFT_1195at 1235.213 kb on + strand, within B158DRAFT_1195at 1235.213 kb on + strand, within B158DRAFT_1195at 1235.428 kb on - strandat 1235.535 kb on + strand, within B158DRAFT_1196at 1235.548 kb on - strand, within B158DRAFT_1196at 1235.560 kb on + strand, within B158DRAFT_1196at 1235.560 kb on + strand, within B158DRAFT_1196at 1235.560 kb on + strand, within B158DRAFT_1196at 1235.568 kb on + strand, within B158DRAFT_1196at 1235.568 kb on - strand, within B158DRAFT_1196at 1235.578 kb on + strand, within B158DRAFT_1196at 1235.651 kb on + strand, within B158DRAFT_1196at 1235.690 kb on - strand, within B158DRAFT_1196at 1235.712 kb on - strand, within B158DRAFT_1196at 1235.712 kb on - strand, within B158DRAFT_1196at 1235.791 kb on + strand, within B158DRAFT_1196at 1235.860 kb on - strand, within B158DRAFT_1196at 1235.940 kb on + strandat 1235.940 kb on + strandat 1235.973 kb on - strandat 1236.028 kb on + strandat 1236.034 kb on + strandat 1236.046 kb on + strandat 1236.129 kb on - strand, within B158DRAFT_1197at 1236.167 kb on - strand, within B158DRAFT_1197at 1236.174 kb on + strand, within B158DRAFT_1197at 1236.174 kb on + strand, within B158DRAFT_1197at 1236.177 kb on - strand, within B158DRAFT_1197at 1236.177 kb on - strand, within B158DRAFT_1197at 1236.182 kb on - strand, within B158DRAFT_1197at 1236.184 kb on + strand, within B158DRAFT_1197at 1236.191 kb on + strand, within B158DRAFT_1197at 1236.191 kb on + strand, within B158DRAFT_1197at 1236.204 kb on + strand, within B158DRAFT_1197at 1236.284 kb on + strand, within B158DRAFT_1197at 1236.375 kb on + strand, within B158DRAFT_1197at 1236.375 kb on + strand, within B158DRAFT_1197at 1236.377 kb on + strand, within B158DRAFT_1197

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.00390625 mg/ml
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1,233,667 - -0.6
1,233,709 + -1.2
1,233,712 - -0.1
1,233,858 + -0.3
1,233,858 + -0.9
1,233,858 + +0.1
1,233,866 - -0.8
1,233,868 + -1.2
1,234,068 + B158DRAFT_1194 0.23 +1.0
1,234,075 - B158DRAFT_1194 0.24 -0.5
1,234,094 - B158DRAFT_1194 0.27 -0.4
1,234,096 + B158DRAFT_1194 0.27 -0.2
1,234,104 - B158DRAFT_1194 0.28 +0.1
1,234,106 + B158DRAFT_1194 0.29 -0.6
1,234,114 - B158DRAFT_1194 0.30 -0.5
1,234,168 - B158DRAFT_1194 0.39 +1.2
1,234,172 + B158DRAFT_1194 0.39 -0.5
1,234,172 + B158DRAFT_1194 0.39 +0.2
1,234,180 - B158DRAFT_1194 0.41 -0.4
1,234,180 - B158DRAFT_1194 0.41 -0.2
1,234,267 - B158DRAFT_1194 0.55 +5.7
1,234,407 - B158DRAFT_1194 0.78 +0.4
1,234,424 + B158DRAFT_1194 0.80 -0.6
1,234,561 + -0.2
1,234,561 + +0.1
1,234,561 + -1.3
1,234,569 - -0.8
1,234,569 - -0.1
1,234,672 - B158DRAFT_1195 0.12 -1.4
1,234,834 - B158DRAFT_1195 0.30 -0.9
1,234,846 + B158DRAFT_1195 0.31 +0.5
1,235,022 - B158DRAFT_1195 0.51 +0.1
1,235,037 - B158DRAFT_1195 0.53 +0.5
1,235,070 + B158DRAFT_1195 0.56 -0.1
1,235,078 - B158DRAFT_1195 0.57 -1.1
1,235,078 - B158DRAFT_1195 0.57 +0.3
1,235,213 + B158DRAFT_1195 0.72 -0.4
1,235,213 + B158DRAFT_1195 0.72 -0.0
1,235,213 + B158DRAFT_1195 0.72 -0.5
1,235,428 - -0.6
1,235,535 + B158DRAFT_1196 0.15 +0.6
1,235,548 - B158DRAFT_1196 0.18 +0.3
1,235,560 + B158DRAFT_1196 0.21 -0.5
1,235,560 + B158DRAFT_1196 0.21 +1.4
1,235,560 + B158DRAFT_1196 0.21 +1.6
1,235,568 + B158DRAFT_1196 0.22 -0.1
1,235,568 - B158DRAFT_1196 0.22 -0.0
1,235,578 + B158DRAFT_1196 0.24 -0.7
1,235,651 + B158DRAFT_1196 0.39 -0.7
1,235,690 - B158DRAFT_1196 0.47 +0.2
1,235,712 - B158DRAFT_1196 0.52 +1.6
1,235,712 - B158DRAFT_1196 0.52 +0.4
1,235,791 + B158DRAFT_1196 0.68 -0.2
1,235,860 - B158DRAFT_1196 0.82 +0.1
1,235,940 + +0.9
1,235,940 + -0.9
1,235,973 - -0.6
1,236,028 + +3.5
1,236,034 + +0.2
1,236,046 + +0.3
1,236,129 - B158DRAFT_1197 0.13 -0.1
1,236,167 - B158DRAFT_1197 0.17 -0.8
1,236,174 + B158DRAFT_1197 0.18 -1.4
1,236,174 + B158DRAFT_1197 0.18 -0.6
1,236,177 - B158DRAFT_1197 0.19 +0.0
1,236,177 - B158DRAFT_1197 0.19 +0.1
1,236,182 - B158DRAFT_1197 0.19 -0.9
1,236,184 + B158DRAFT_1197 0.19 +0.1
1,236,191 + B158DRAFT_1197 0.20 -0.9
1,236,191 + B158DRAFT_1197 0.20 -1.1
1,236,204 + B158DRAFT_1197 0.22 +0.8
1,236,284 + B158DRAFT_1197 0.31 -0.1
1,236,375 + B158DRAFT_1197 0.42 -0.7
1,236,375 + B158DRAFT_1197 0.42 -0.5
1,236,377 + B158DRAFT_1197 0.42 -0.4

Or see this region's nucleotide sequence