Experiment: m.b. Paraquat dichloride 0.00390625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1177 and B158DRAFT_1178 are separated by 44 nucleotides B158DRAFT_1178 and B158DRAFT_1179 are separated by 116 nucleotides
B158DRAFT_1177: B158DRAFT_1177 - hypothetical protein, at 1,216,115 to 1,217,236
_1177
B158DRAFT_1178: B158DRAFT_1178 - Sortase and related acyltransferases, at 1,217,281 to 1,217,772
_1178
B158DRAFT_1179: B158DRAFT_1179 - Uncharacterized protein conserved in bacteria, at 1,217,889 to 1,218,884
_1179
Position (kb)
1217
1218 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5 at 1216.286 kb on - strand, within B158DRAFT_1177 at 1216.315 kb on + strand, within B158DRAFT_1177 at 1216.321 kb on + strand, within B158DRAFT_1177 at 1216.324 kb on - strand, within B158DRAFT_1177 at 1216.329 kb on - strand, within B158DRAFT_1177 at 1216.334 kb on - strand, within B158DRAFT_1177 at 1216.447 kb on - strand, within B158DRAFT_1177 at 1216.472 kb on - strand, within B158DRAFT_1177 at 1216.531 kb on + strand, within B158DRAFT_1177 at 1216.654 kb on + strand, within B158DRAFT_1177 at 1216.654 kb on + strand, within B158DRAFT_1177 at 1216.662 kb on - strand, within B158DRAFT_1177 at 1216.662 kb on - strand, within B158DRAFT_1177 at 1216.662 kb on - strand, within B158DRAFT_1177 at 1216.668 kb on + strand, within B158DRAFT_1177 at 1216.702 kb on - strand, within B158DRAFT_1177 at 1216.741 kb on + strand, within B158DRAFT_1177 at 1216.764 kb on - strand, within B158DRAFT_1177 at 1216.798 kb on + strand, within B158DRAFT_1177 at 1216.842 kb on - strand, within B158DRAFT_1177 at 1216.876 kb on + strand, within B158DRAFT_1177 at 1216.981 kb on + strand, within B158DRAFT_1177 at 1216.994 kb on + strand, within B158DRAFT_1177 at 1217.002 kb on - strand, within B158DRAFT_1177 at 1217.002 kb on - strand, within B158DRAFT_1177 at 1217.002 kb on - strand, within B158DRAFT_1177 at 1217.012 kb on - strand, within B158DRAFT_1177 at 1217.012 kb on - strand, within B158DRAFT_1177 at 1217.012 kb on - strand, within B158DRAFT_1177 at 1217.022 kb on + strand, within B158DRAFT_1177 at 1217.022 kb on + strand, within B158DRAFT_1177 at 1217.022 kb on + strand, within B158DRAFT_1177 at 1217.039 kb on + strand, within B158DRAFT_1177 at 1217.039 kb on + strand, within B158DRAFT_1177 at 1217.044 kb on + strand, within B158DRAFT_1177 at 1217.061 kb on - strand, within B158DRAFT_1177 at 1217.082 kb on + strand, within B158DRAFT_1177 at 1217.123 kb on - strand, within B158DRAFT_1177 at 1217.128 kb on - strand at 1217.128 kb on - strand at 1217.166 kb on + strand at 1217.168 kb on - strand at 1217.196 kb on - strand at 1217.316 kb on - strand at 1217.321 kb on - strand at 1217.388 kb on + strand, within B158DRAFT_1178 at 1217.403 kb on - strand, within B158DRAFT_1178 at 1217.412 kb on + strand, within B158DRAFT_1178 at 1217.420 kb on - strand, within B158DRAFT_1178 at 1217.422 kb on + strand, within B158DRAFT_1178 at 1217.447 kb on + strand, within B158DRAFT_1178 at 1217.478 kb on + strand, within B158DRAFT_1178 at 1217.478 kb on + strand, within B158DRAFT_1178 at 1217.491 kb on + strand, within B158DRAFT_1178 at 1217.491 kb on + strand, within B158DRAFT_1178 at 1217.491 kb on + strand, within B158DRAFT_1178 at 1217.491 kb on + strand, within B158DRAFT_1178 at 1217.499 kb on - strand, within B158DRAFT_1178 at 1217.499 kb on - strand, within B158DRAFT_1178 at 1217.499 kb on - strand, within B158DRAFT_1178 at 1217.499 kb on - strand, within B158DRAFT_1178 at 1217.499 kb on - strand, within B158DRAFT_1178 at 1217.499 kb on - strand, within B158DRAFT_1178 at 1217.499 kb on - strand, within B158DRAFT_1178 at 1217.499 kb on - strand, within B158DRAFT_1178 at 1217.529 kb on + strand, within B158DRAFT_1178 at 1217.529 kb on + strand, within B158DRAFT_1178 at 1217.542 kb on + strand, within B158DRAFT_1178 at 1217.581 kb on - strand, within B158DRAFT_1178 at 1217.616 kb on + strand, within B158DRAFT_1178 at 1217.623 kb on - strand, within B158DRAFT_1178 at 1217.643 kb on + strand, within B158DRAFT_1178 at 1217.659 kb on + strand, within B158DRAFT_1178 at 1217.756 kb on - strand at 1217.756 kb on - strand at 1217.864 kb on - strand at 1217.950 kb on + strand at 1217.950 kb on + strand at 1217.964 kb on - strand at 1217.965 kb on - strand at 1218.012 kb on - strand, within B158DRAFT_1179 at 1218.067 kb on + strand, within B158DRAFT_1179 at 1218.067 kb on + strand, within B158DRAFT_1179 at 1218.085 kb on - strand, within B158DRAFT_1179 at 1218.126 kb on + strand, within B158DRAFT_1179 at 1218.127 kb on + strand, within B158DRAFT_1179 at 1218.134 kb on + strand, within B158DRAFT_1179 at 1218.168 kb on + strand, within B158DRAFT_1179 at 1218.223 kb on + strand, within B158DRAFT_1179 at 1218.223 kb on + strand, within B158DRAFT_1179 at 1218.231 kb on - strand, within B158DRAFT_1179 at 1218.231 kb on - strand, within B158DRAFT_1179 at 1218.291 kb on - strand, within B158DRAFT_1179 at 1218.301 kb on + strand, within B158DRAFT_1179 at 1218.301 kb on + strand, within B158DRAFT_1179 at 1218.309 kb on - strand, within B158DRAFT_1179 at 1218.309 kb on - strand, within B158DRAFT_1179 at 1218.309 kb on - strand, within B158DRAFT_1179 at 1218.309 kb on - strand, within B158DRAFT_1179 at 1218.309 kb on - strand, within B158DRAFT_1179 at 1218.309 kb on - strand, within B158DRAFT_1179 at 1218.309 kb on - strand, within B158DRAFT_1179 at 1218.309 kb on - strand, within B158DRAFT_1179 at 1218.314 kb on - strand, within B158DRAFT_1179 at 1218.326 kb on + strand, within B158DRAFT_1179 at 1218.498 kb on + strand, within B158DRAFT_1179 at 1218.530 kb on + strand, within B158DRAFT_1179 at 1218.549 kb on + strand, within B158DRAFT_1179 at 1218.557 kb on - strand, within B158DRAFT_1179 at 1218.557 kb on - strand, within B158DRAFT_1179 at 1218.557 kb on - strand, within B158DRAFT_1179 at 1218.613 kb on - strand, within B158DRAFT_1179 at 1218.639 kb on + strand, within B158DRAFT_1179 at 1218.691 kb on - strand, within B158DRAFT_1179 at 1218.746 kb on + strand, within B158DRAFT_1179 at 1218.766 kb on + strand, within B158DRAFT_1179 at 1218.766 kb on + strand, within B158DRAFT_1179 at 1218.766 kb on + strand, within B158DRAFT_1179 at 1218.766 kb on + strand, within B158DRAFT_1179 at 1218.767 kb on + strand, within B158DRAFT_1179
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.00390625 mg/ml remove 1,216,286 - B158DRAFT_1177 0.15 -1.9 1,216,315 + B158DRAFT_1177 0.18 +0.5 1,216,321 + B158DRAFT_1177 0.18 -1.3 1,216,324 - B158DRAFT_1177 0.19 +0.6 1,216,329 - B158DRAFT_1177 0.19 -0.6 1,216,334 - B158DRAFT_1177 0.20 +0.1 1,216,447 - B158DRAFT_1177 0.30 -0.1 1,216,472 - B158DRAFT_1177 0.32 +0.5 1,216,531 + B158DRAFT_1177 0.37 -0.2 1,216,654 + B158DRAFT_1177 0.48 -0.7 1,216,654 + B158DRAFT_1177 0.48 +0.0 1,216,662 - B158DRAFT_1177 0.49 +0.2 1,216,662 - B158DRAFT_1177 0.49 +1.8 1,216,662 - B158DRAFT_1177 0.49 +5.2 1,216,668 + B158DRAFT_1177 0.49 -0.3 1,216,702 - B158DRAFT_1177 0.52 -0.3 1,216,741 + B158DRAFT_1177 0.56 -0.1 1,216,764 - B158DRAFT_1177 0.58 -1.8 1,216,798 + B158DRAFT_1177 0.61 -1.1 1,216,842 - B158DRAFT_1177 0.65 -0.0 1,216,876 + B158DRAFT_1177 0.68 -0.3 1,216,981 + B158DRAFT_1177 0.77 -0.3 1,216,994 + B158DRAFT_1177 0.78 +0.6 1,217,002 - B158DRAFT_1177 0.79 -0.7 1,217,002 - B158DRAFT_1177 0.79 +0.4 1,217,002 - B158DRAFT_1177 0.79 +0.1 1,217,012 - B158DRAFT_1177 0.80 -0.4 1,217,012 - B158DRAFT_1177 0.80 -0.8 1,217,012 - B158DRAFT_1177 0.80 -0.7 1,217,022 + B158DRAFT_1177 0.81 +0.2 1,217,022 + B158DRAFT_1177 0.81 -0.8 1,217,022 + B158DRAFT_1177 0.81 -0.5 1,217,039 + B158DRAFT_1177 0.82 +0.2 1,217,039 + B158DRAFT_1177 0.82 -1.0 1,217,044 + B158DRAFT_1177 0.83 -0.8 1,217,061 - B158DRAFT_1177 0.84 -0.2 1,217,082 + B158DRAFT_1177 0.86 -0.2 1,217,123 - B158DRAFT_1177 0.90 -0.7 1,217,128 - -0.3 1,217,128 - +0.3 1,217,166 + -1.0 1,217,168 - -0.5 1,217,196 - +0.1 1,217,316 - -0.1 1,217,321 - -0.2 1,217,388 + B158DRAFT_1178 0.22 -0.4 1,217,403 - B158DRAFT_1178 0.25 +0.8 1,217,412 + B158DRAFT_1178 0.27 -0.2 1,217,420 - B158DRAFT_1178 0.28 +1.2 1,217,422 + B158DRAFT_1178 0.29 +4.1 1,217,447 + B158DRAFT_1178 0.34 +0.0 1,217,478 + B158DRAFT_1178 0.40 -1.1 1,217,478 + B158DRAFT_1178 0.40 -1.9 1,217,491 + B158DRAFT_1178 0.43 +0.8 1,217,491 + B158DRAFT_1178 0.43 +0.3 1,217,491 + B158DRAFT_1178 0.43 -0.3 1,217,491 + B158DRAFT_1178 0.43 -0.3 1,217,499 - B158DRAFT_1178 0.44 -0.7 1,217,499 - B158DRAFT_1178 0.44 +3.0 1,217,499 - B158DRAFT_1178 0.44 -0.2 1,217,499 - B158DRAFT_1178 0.44 -0.3 1,217,499 - B158DRAFT_1178 0.44 -0.2 1,217,499 - B158DRAFT_1178 0.44 +1.2 1,217,499 - B158DRAFT_1178 0.44 -0.1 1,217,499 - B158DRAFT_1178 0.44 -0.2 1,217,529 + B158DRAFT_1178 0.50 -0.4 1,217,529 + B158DRAFT_1178 0.50 -0.2 1,217,542 + B158DRAFT_1178 0.53 +0.4 1,217,581 - B158DRAFT_1178 0.61 +0.2 1,217,616 + B158DRAFT_1178 0.68 -0.6 1,217,623 - B158DRAFT_1178 0.70 -0.9 1,217,643 + B158DRAFT_1178 0.74 -0.1 1,217,659 + B158DRAFT_1178 0.77 -0.3 1,217,756 - -1.2 1,217,756 - -0.3 1,217,864 - -0.4 1,217,950 + -0.7 1,217,950 + +0.1 1,217,964 - -0.1 1,217,965 - +0.9 1,218,012 - B158DRAFT_1179 0.12 +0.3 1,218,067 + B158DRAFT_1179 0.18 -0.8 1,218,067 + B158DRAFT_1179 0.18 -0.6 1,218,085 - B158DRAFT_1179 0.20 -0.1 1,218,126 + B158DRAFT_1179 0.24 -0.9 1,218,127 + B158DRAFT_1179 0.24 +0.5 1,218,134 + B158DRAFT_1179 0.25 -0.6 1,218,168 + B158DRAFT_1179 0.28 +0.9 1,218,223 + B158DRAFT_1179 0.34 +1.0 1,218,223 + B158DRAFT_1179 0.34 -0.2 1,218,231 - B158DRAFT_1179 0.34 +1.2 1,218,231 - B158DRAFT_1179 0.34 -0.6 1,218,291 - B158DRAFT_1179 0.40 -0.9 1,218,301 + B158DRAFT_1179 0.41 -0.1 1,218,301 + B158DRAFT_1179 0.41 -0.9 1,218,309 - B158DRAFT_1179 0.42 -1.0 1,218,309 - B158DRAFT_1179 0.42 +0.7 1,218,309 - B158DRAFT_1179 0.42 -0.3 1,218,309 - B158DRAFT_1179 0.42 +0.5 1,218,309 - B158DRAFT_1179 0.42 +1.2 1,218,309 - B158DRAFT_1179 0.42 +0.2 1,218,309 - B158DRAFT_1179 0.42 -0.7 1,218,309 - B158DRAFT_1179 0.42 -1.2 1,218,314 - B158DRAFT_1179 0.43 -0.5 1,218,326 + B158DRAFT_1179 0.44 +0.3 1,218,498 + B158DRAFT_1179 0.61 -1.3 1,218,530 + B158DRAFT_1179 0.64 -0.4 1,218,549 + B158DRAFT_1179 0.66 +0.8 1,218,557 - B158DRAFT_1179 0.67 +0.1 1,218,557 - B158DRAFT_1179 0.67 -0.1 1,218,557 - B158DRAFT_1179 0.67 -0.4 1,218,613 - B158DRAFT_1179 0.73 +1.2 1,218,639 + B158DRAFT_1179 0.75 -0.3 1,218,691 - B158DRAFT_1179 0.81 -1.3 1,218,746 + B158DRAFT_1179 0.86 -0.4 1,218,766 + B158DRAFT_1179 0.88 +0.9 1,218,766 + B158DRAFT_1179 0.88 -0.7 1,218,766 + B158DRAFT_1179 0.88 +0.2 1,218,766 + B158DRAFT_1179 0.88 -0.1 1,218,767 + B158DRAFT_1179 0.88 -0.2
Or see this region's nucleotide sequence