Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1173

Experiment: m.b. Paraquat dichloride 0.00390625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1172 and B158DRAFT_1173 are separated by 188 nucleotidesB158DRAFT_1173 and B158DRAFT_1174 are separated by 3 nucleotidesB158DRAFT_1174 and B158DRAFT_1175 are separated by 86 nucleotidesB158DRAFT_1175 and B158DRAFT_1176 are separated by 429 nucleotides B158DRAFT_1172: B158DRAFT_1172 - Uncharacterized protein conserved in bacteria, at 1,211,940 to 1,213,736 _1172 B158DRAFT_1173: B158DRAFT_1173 - hypothetical protein, at 1,213,925 to 1,214,395 _1173 B158DRAFT_1174: B158DRAFT_1174 - Predicted transcriptional regulators, at 1,214,399 to 1,214,623 _1174 B158DRAFT_1175: B158DRAFT_1175 - tRNA_Leu_CAA, at 1,214,710 to 1,214,796 _1175 B158DRAFT_1176: B158DRAFT_1176 - hypothetical protein, at 1,215,226 to 1,216,104 _1176 Position (kb) 1213 1214 1215Strain fitness (log2 ratio) -2 -1 0 1 2 3at 1212.964 kb on - strand, within B158DRAFT_1172at 1212.964 kb on - strand, within B158DRAFT_1172at 1212.990 kb on + strand, within B158DRAFT_1172at 1212.990 kb on + strand, within B158DRAFT_1172at 1212.990 kb on + strand, within B158DRAFT_1172at 1212.990 kb on + strand, within B158DRAFT_1172at 1212.998 kb on - strand, within B158DRAFT_1172at 1212.998 kb on - strand, within B158DRAFT_1172at 1212.998 kb on - strand, within B158DRAFT_1172at 1212.998 kb on - strand, within B158DRAFT_1172at 1212.998 kb on - strand, within B158DRAFT_1172at 1213.010 kb on - strand, within B158DRAFT_1172at 1213.031 kb on + strand, within B158DRAFT_1172at 1213.034 kb on - strand, within B158DRAFT_1172at 1213.034 kb on - strand, within B158DRAFT_1172at 1213.039 kb on - strand, within B158DRAFT_1172at 1213.041 kb on + strand, within B158DRAFT_1172at 1213.042 kb on - strand, within B158DRAFT_1172at 1213.081 kb on - strand, within B158DRAFT_1172at 1213.101 kb on + strand, within B158DRAFT_1172at 1213.101 kb on + strand, within B158DRAFT_1172at 1213.101 kb on + strand, within B158DRAFT_1172at 1213.101 kb on + strand, within B158DRAFT_1172at 1213.101 kb on + strand, within B158DRAFT_1172at 1213.101 kb on + strand, within B158DRAFT_1172at 1213.101 kb on + strand, within B158DRAFT_1172at 1213.101 kb on + strand, within B158DRAFT_1172at 1213.109 kb on - strand, within B158DRAFT_1172at 1213.109 kb on - strand, within B158DRAFT_1172at 1213.109 kb on - strand, within B158DRAFT_1172at 1213.109 kb on - strand, within B158DRAFT_1172at 1213.109 kb on - strand, within B158DRAFT_1172at 1213.109 kb on - strand, within B158DRAFT_1172at 1213.109 kb on - strand, within B158DRAFT_1172at 1213.109 kb on - strand, within B158DRAFT_1172at 1213.109 kb on - strand, within B158DRAFT_1172at 1213.109 kb on - strand, within B158DRAFT_1172at 1213.109 kb on - strand, within B158DRAFT_1172at 1213.114 kb on - strand, within B158DRAFT_1172at 1213.114 kb on - strand, within B158DRAFT_1172at 1213.122 kb on + strand, within B158DRAFT_1172at 1213.130 kb on - strand, within B158DRAFT_1172at 1213.133 kb on + strand, within B158DRAFT_1172at 1213.139 kb on + strand, within B158DRAFT_1172at 1213.151 kb on + strand, within B158DRAFT_1172at 1213.151 kb on + strand, within B158DRAFT_1172at 1213.169 kb on - strand, within B158DRAFT_1172at 1213.214 kb on + strand, within B158DRAFT_1172at 1213.224 kb on + strand, within B158DRAFT_1172at 1213.227 kb on - strand, within B158DRAFT_1172at 1213.237 kb on - strand, within B158DRAFT_1172at 1213.293 kb on + strand, within B158DRAFT_1172at 1213.294 kb on + strand, within B158DRAFT_1172at 1213.372 kb on + strand, within B158DRAFT_1172at 1213.372 kb on + strand, within B158DRAFT_1172at 1213.372 kb on + strand, within B158DRAFT_1172at 1213.429 kb on - strand, within B158DRAFT_1172at 1213.429 kb on - strand, within B158DRAFT_1172at 1213.443 kb on - strand, within B158DRAFT_1172at 1213.530 kb on - strand, within B158DRAFT_1172at 1213.530 kb on - strand, within B158DRAFT_1172at 1213.540 kb on + strand, within B158DRAFT_1172at 1213.540 kb on - strand, within B158DRAFT_1172at 1213.546 kb on + strand, within B158DRAFT_1172at 1213.554 kb on - strand, within B158DRAFT_1172at 1213.665 kb on - strandat 1213.734 kb on - strandat 1213.870 kb on + strandat 1213.941 kb on + strandat 1213.971 kb on + strandat 1214.043 kb on - strand, within B158DRAFT_1173at 1214.049 kb on - strand, within B158DRAFT_1173at 1214.062 kb on + strand, within B158DRAFT_1173at 1214.067 kb on + strand, within B158DRAFT_1173at 1214.067 kb on + strand, within B158DRAFT_1173at 1214.067 kb on + strand, within B158DRAFT_1173at 1214.067 kb on + strand, within B158DRAFT_1173at 1214.068 kb on + strand, within B158DRAFT_1173at 1214.070 kb on - strand, within B158DRAFT_1173at 1214.075 kb on - strand, within B158DRAFT_1173at 1214.076 kb on - strand, within B158DRAFT_1173at 1214.082 kb on + strand, within B158DRAFT_1173at 1214.084 kb on + strand, within B158DRAFT_1173at 1214.160 kb on - strand, within B158DRAFT_1173at 1214.168 kb on - strand, within B158DRAFT_1173at 1214.287 kb on + strand, within B158DRAFT_1173at 1214.295 kb on - strand, within B158DRAFT_1173at 1214.296 kb on + strand, within B158DRAFT_1173at 1214.296 kb on + strand, within B158DRAFT_1173at 1214.301 kb on + strand, within B158DRAFT_1173at 1214.309 kb on - strand, within B158DRAFT_1173at 1214.389 kb on + strandat 1214.389 kb on + strandat 1214.394 kb on + strandat 1214.394 kb on + strandat 1214.394 kb on + strandat 1214.394 kb on + strandat 1214.394 kb on + strandat 1214.394 kb on + strandat 1214.394 kb on + strandat 1214.402 kb on - strandat 1214.438 kb on + strand, within B158DRAFT_1174at 1214.521 kb on + strand, within B158DRAFT_1174at 1214.563 kb on + strand, within B158DRAFT_1174at 1214.563 kb on + strand, within B158DRAFT_1174at 1214.571 kb on - strand, within B158DRAFT_1174at 1214.585 kb on + strand, within B158DRAFT_1174at 1214.593 kb on - strand, within B158DRAFT_1174at 1214.627 kb on + strandat 1214.635 kb on - strandat 1214.635 kb on - strandat 1214.906 kb on + strandat 1214.914 kb on - strandat 1214.916 kb on + strandat 1214.916 kb on + strandat 1214.916 kb on + strandat 1214.916 kb on + strandat 1214.916 kb on + strandat 1214.924 kb on - strandat 1214.924 kb on - strandat 1214.924 kb on - strandat 1214.924 kb on - strandat 1215.281 kb on - strandat 1215.297 kb on + strandat 1215.343 kb on - strand, within B158DRAFT_1176at 1215.343 kb on - strand, within B158DRAFT_1176at 1215.348 kb on - strand, within B158DRAFT_1176at 1215.356 kb on + strand, within B158DRAFT_1176at 1215.384 kb on - strand, within B158DRAFT_1176

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.00390625 mg/ml
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1,212,964 - B158DRAFT_1172 0.57 -0.7
1,212,964 - B158DRAFT_1172 0.57 -0.8
1,212,990 + B158DRAFT_1172 0.58 -1.1
1,212,990 + B158DRAFT_1172 0.58 -0.5
1,212,990 + B158DRAFT_1172 0.58 +0.4
1,212,990 + B158DRAFT_1172 0.58 -0.2
1,212,998 - B158DRAFT_1172 0.59 -0.5
1,212,998 - B158DRAFT_1172 0.59 +1.2
1,212,998 - B158DRAFT_1172 0.59 +1.4
1,212,998 - B158DRAFT_1172 0.59 +0.3
1,212,998 - B158DRAFT_1172 0.59 -0.3
1,213,010 - B158DRAFT_1172 0.60 +3.7
1,213,031 + B158DRAFT_1172 0.61 -1.1
1,213,034 - B158DRAFT_1172 0.61 -0.1
1,213,034 - B158DRAFT_1172 0.61 +0.1
1,213,039 - B158DRAFT_1172 0.61 -0.8
1,213,041 + B158DRAFT_1172 0.61 -0.4
1,213,042 - B158DRAFT_1172 0.61 +0.2
1,213,081 - B158DRAFT_1172 0.63 +0.0
1,213,101 + B158DRAFT_1172 0.65 -0.4
1,213,101 + B158DRAFT_1172 0.65 -0.1
1,213,101 + B158DRAFT_1172 0.65 -0.3
1,213,101 + B158DRAFT_1172 0.65 -0.6
1,213,101 + B158DRAFT_1172 0.65 -0.8
1,213,101 + B158DRAFT_1172 0.65 -1.0
1,213,101 + B158DRAFT_1172 0.65 +0.1
1,213,101 + B158DRAFT_1172 0.65 +0.6
1,213,109 - B158DRAFT_1172 0.65 +2.5
1,213,109 - B158DRAFT_1172 0.65 -0.8
1,213,109 - B158DRAFT_1172 0.65 -0.8
1,213,109 - B158DRAFT_1172 0.65 -0.8
1,213,109 - B158DRAFT_1172 0.65 +0.0
1,213,109 - B158DRAFT_1172 0.65 +0.9
1,213,109 - B158DRAFT_1172 0.65 -0.8
1,213,109 - B158DRAFT_1172 0.65 -0.7
1,213,109 - B158DRAFT_1172 0.65 -0.0
1,213,109 - B158DRAFT_1172 0.65 -1.1
1,213,109 - B158DRAFT_1172 0.65 +0.1
1,213,114 - B158DRAFT_1172 0.65 +0.6
1,213,114 - B158DRAFT_1172 0.65 -0.2
1,213,122 + B158DRAFT_1172 0.66 -0.2
1,213,130 - B158DRAFT_1172 0.66 -0.5
1,213,133 + B158DRAFT_1172 0.66 +0.4
1,213,139 + B158DRAFT_1172 0.67 -0.1
1,213,151 + B158DRAFT_1172 0.67 -0.5
1,213,151 + B158DRAFT_1172 0.67 +0.3
1,213,169 - B158DRAFT_1172 0.68 -0.7
1,213,214 + B158DRAFT_1172 0.71 -0.1
1,213,224 + B158DRAFT_1172 0.71 -0.5
1,213,227 - B158DRAFT_1172 0.72 -1.7
1,213,237 - B158DRAFT_1172 0.72 -0.2
1,213,293 + B158DRAFT_1172 0.75 +0.0
1,213,294 + B158DRAFT_1172 0.75 -1.6
1,213,372 + B158DRAFT_1172 0.80 -0.3
1,213,372 + B158DRAFT_1172 0.80 -1.1
1,213,372 + B158DRAFT_1172 0.80 -0.3
1,213,429 - B158DRAFT_1172 0.83 -0.5
1,213,429 - B158DRAFT_1172 0.83 -0.3
1,213,443 - B158DRAFT_1172 0.84 -1.5
1,213,530 - B158DRAFT_1172 0.88 -0.3
1,213,530 - B158DRAFT_1172 0.88 -0.0
1,213,540 + B158DRAFT_1172 0.89 -0.5
1,213,540 - B158DRAFT_1172 0.89 -0.2
1,213,546 + B158DRAFT_1172 0.89 -0.3
1,213,554 - B158DRAFT_1172 0.90 -0.3
1,213,665 - -0.8
1,213,734 - -0.1
1,213,870 + +0.3
1,213,941 + -0.4
1,213,971 + -1.2
1,214,043 - B158DRAFT_1173 0.25 +0.4
1,214,049 - B158DRAFT_1173 0.26 -1.8
1,214,062 + B158DRAFT_1173 0.29 +0.4
1,214,067 + B158DRAFT_1173 0.30 +0.7
1,214,067 + B158DRAFT_1173 0.30 -0.8
1,214,067 + B158DRAFT_1173 0.30 -0.1
1,214,067 + B158DRAFT_1173 0.30 -0.7
1,214,068 + B158DRAFT_1173 0.30 +0.4
1,214,070 - B158DRAFT_1173 0.31 -1.4
1,214,075 - B158DRAFT_1173 0.32 +0.2
1,214,076 - B158DRAFT_1173 0.32 -1.3
1,214,082 + B158DRAFT_1173 0.33 +0.2
1,214,084 + B158DRAFT_1173 0.34 -0.5
1,214,160 - B158DRAFT_1173 0.50 -1.4
1,214,168 - B158DRAFT_1173 0.52 +0.3
1,214,287 + B158DRAFT_1173 0.77 -0.5
1,214,295 - B158DRAFT_1173 0.79 -0.4
1,214,296 + B158DRAFT_1173 0.79 -1.3
1,214,296 + B158DRAFT_1173 0.79 -1.6
1,214,301 + B158DRAFT_1173 0.80 +0.8
1,214,309 - B158DRAFT_1173 0.82 +0.3
1,214,389 + +2.1
1,214,389 + -0.1
1,214,394 + -0.4
1,214,394 + -0.5
1,214,394 + -0.3
1,214,394 + +0.8
1,214,394 + -1.1
1,214,394 + -0.0
1,214,394 + -1.2
1,214,402 - +1.0
1,214,438 + B158DRAFT_1174 0.17 -0.9
1,214,521 + B158DRAFT_1174 0.54 -0.4
1,214,563 + B158DRAFT_1174 0.73 -0.5
1,214,563 + B158DRAFT_1174 0.73 -0.4
1,214,571 - B158DRAFT_1174 0.76 -0.1
1,214,585 + B158DRAFT_1174 0.83 +0.2
1,214,593 - B158DRAFT_1174 0.86 -0.4
1,214,627 + -0.6
1,214,635 - -0.6
1,214,635 - -0.4
1,214,906 + +0.4
1,214,914 - -1.0
1,214,916 + -0.4
1,214,916 + +1.1
1,214,916 + -1.0
1,214,916 + -0.4
1,214,916 + -0.1
1,214,924 - -0.6
1,214,924 - +0.1
1,214,924 - -2.3
1,214,924 - -0.4
1,215,281 - -0.4
1,215,297 + -1.8
1,215,343 - B158DRAFT_1176 0.13 +0.1
1,215,343 - B158DRAFT_1176 0.13 +0.3
1,215,348 - B158DRAFT_1176 0.14 -1.0
1,215,356 + B158DRAFT_1176 0.15 +3.2
1,215,384 - B158DRAFT_1176 0.18 -1.2

Or see this region's nucleotide sequence