Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1085

Experiment: m.b. Paraquat dichloride 0.00390625 mg/ml

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_1083 and B158DRAFT_1084 are separated by 87 nucleotidesB158DRAFT_1084 and B158DRAFT_1085 are separated by 3 nucleotidesB158DRAFT_1085 and B158DRAFT_1086 are separated by 2 nucleotides B158DRAFT_1083: B158DRAFT_1083 - ribosome recycling factor, at 1,120,123 to 1,120,680 _1083 B158DRAFT_1084: B158DRAFT_1084 - undecaprenyl diphosphate synthase, at 1,120,768 to 1,121,490 _1084 B158DRAFT_1085: B158DRAFT_1085 - CDP-diglyceride synthetase, at 1,121,494 to 1,122,384 _1085 B158DRAFT_1086: B158DRAFT_1086 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267), at 1,122,387 to 1,123,586 _1086 Position (kb) 1121 1122 1123Strain fitness (log2 ratio) -1 0 1at 1120.711 kb on + strandat 1120.711 kb on + strandat 1120.711 kb on + strandat 1121.475 kb on + strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.00390625 mg/ml
remove
1,120,711 + -0.1
1,120,711 + -0.3
1,120,711 + +1.4
1,121,475 + -0.6

Or see this region's nucleotide sequence