Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1081

Experiment: m.b. Paraquat dichloride 0.00390625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1080 and B158DRAFT_1081 are separated by 107 nucleotidesB158DRAFT_1081 and B158DRAFT_1082 are separated by 60 nucleotidesB158DRAFT_1082 and B158DRAFT_1083 are separated by 102 nucleotides B158DRAFT_1080: B158DRAFT_1080 - ribosomal protein S2, bacterial type, at 1,117,532 to 1,118,266 _1080 B158DRAFT_1081: B158DRAFT_1081 - translation elongation factor Ts, at 1,118,374 to 1,119,243 _1081 B158DRAFT_1082: B158DRAFT_1082 - uridylate kinase (EC 2.7.4.22), at 1,119,304 to 1,120,020 _1082 B158DRAFT_1083: B158DRAFT_1083 - ribosome recycling factor, at 1,120,123 to 1,120,680 _1083 Position (kb) 1118 1119 1120Strain fitness (log2 ratio) -2 -1 0 1 2at 1118.204 kb on + strandat 1119.254 kb on + strandat 1119.267 kb on + strandat 1119.464 kb on - strand, within B158DRAFT_1082at 1120.017 kb on - strandat 1120.019 kb on + strandat 1120.052 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.00390625 mg/ml
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1,118,204 + +2.6
1,119,254 + -0.5
1,119,267 + +0.9
1,119,464 - B158DRAFT_1082 0.22 +1.2
1,120,017 - -0.6
1,120,019 + -2.1
1,120,052 + -0.2

Or see this region's nucleotide sequence