Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0997

Experiment: m.b. Paraquat dichloride 0.00390625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0996 and B158DRAFT_0997 are separated by 32 nucleotidesB158DRAFT_0997 and B158DRAFT_0998 are separated by 153 nucleotides B158DRAFT_0996: B158DRAFT_0996 - adhesin-associated BNR repeat protein (from data), at 1,030,632 to 1,031,639 _0996 B158DRAFT_0997: B158DRAFT_0997 - adhesin-associated MmpL efflux pump (from data), at 1,031,672 to 1,034,020 _0997 B158DRAFT_0998: B158DRAFT_0998 - NAD-specific glutamate dehydrogenase, at 1,034,174 to 1,039,012 _0998 Position (kb) 1031 1032 1033 1034 1035Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 1030.716 kb on + strandat 1030.801 kb on - strand, within B158DRAFT_0996at 1030.807 kb on + strand, within B158DRAFT_0996at 1030.832 kb on - strand, within B158DRAFT_0996at 1030.847 kb on + strand, within B158DRAFT_0996at 1030.932 kb on + strand, within B158DRAFT_0996at 1031.066 kb on - strand, within B158DRAFT_0996at 1031.098 kb on - strand, within B158DRAFT_0996at 1031.098 kb on - strand, within B158DRAFT_0996at 1031.100 kb on + strand, within B158DRAFT_0996at 1031.109 kb on - strand, within B158DRAFT_0996at 1031.155 kb on - strand, within B158DRAFT_0996at 1031.155 kb on - strand, within B158DRAFT_0996at 1031.155 kb on - strand, within B158DRAFT_0996at 1031.212 kb on + strand, within B158DRAFT_0996at 1031.271 kb on + strand, within B158DRAFT_0996at 1031.554 kb on + strandat 1031.654 kb on + strandat 1031.733 kb on + strandat 1031.842 kb on + strandat 1031.883 kb on - strandat 1032.006 kb on - strand, within B158DRAFT_0997at 1032.030 kb on + strand, within B158DRAFT_0997at 1032.035 kb on - strand, within B158DRAFT_0997at 1032.133 kb on + strand, within B158DRAFT_0997at 1032.303 kb on - strand, within B158DRAFT_0997at 1032.325 kb on - strand, within B158DRAFT_0997at 1032.342 kb on + strand, within B158DRAFT_0997at 1032.418 kb on + strand, within B158DRAFT_0997at 1032.423 kb on + strand, within B158DRAFT_0997at 1032.423 kb on + strand, within B158DRAFT_0997at 1032.431 kb on - strand, within B158DRAFT_0997at 1032.431 kb on - strand, within B158DRAFT_0997at 1032.431 kb on - strand, within B158DRAFT_0997at 1032.456 kb on + strand, within B158DRAFT_0997at 1032.456 kb on + strand, within B158DRAFT_0997at 1032.528 kb on + strand, within B158DRAFT_0997at 1032.535 kb on - strand, within B158DRAFT_0997at 1032.594 kb on + strand, within B158DRAFT_0997at 1032.594 kb on + strand, within B158DRAFT_0997at 1032.602 kb on - strand, within B158DRAFT_0997at 1032.610 kb on + strand, within B158DRAFT_0997at 1032.610 kb on + strand, within B158DRAFT_0997at 1032.625 kb on + strand, within B158DRAFT_0997at 1032.628 kb on - strand, within B158DRAFT_0997at 1032.628 kb on - strand, within B158DRAFT_0997at 1032.628 kb on - strand, within B158DRAFT_0997at 1032.630 kb on + strand, within B158DRAFT_0997at 1032.638 kb on - strand, within B158DRAFT_0997at 1032.659 kb on - strand, within B158DRAFT_0997at 1032.673 kb on - strand, within B158DRAFT_0997at 1032.675 kb on + strand, within B158DRAFT_0997at 1032.675 kb on + strand, within B158DRAFT_0997at 1032.675 kb on + strand, within B158DRAFT_0997at 1032.675 kb on + strand, within B158DRAFT_0997at 1032.680 kb on + strand, within B158DRAFT_0997at 1032.680 kb on + strand, within B158DRAFT_0997at 1032.683 kb on - strand, within B158DRAFT_0997at 1032.688 kb on - strand, within B158DRAFT_0997at 1032.688 kb on - strand, within B158DRAFT_0997at 1032.688 kb on - strand, within B158DRAFT_0997at 1032.720 kb on - strand, within B158DRAFT_0997at 1032.808 kb on - strand, within B158DRAFT_0997at 1032.942 kb on - strand, within B158DRAFT_0997at 1033.061 kb on + strand, within B158DRAFT_0997at 1033.101 kb on + strand, within B158DRAFT_0997at 1033.107 kb on + strand, within B158DRAFT_0997at 1033.115 kb on - strand, within B158DRAFT_0997at 1033.135 kb on + strand, within B158DRAFT_0997at 1033.135 kb on + strand, within B158DRAFT_0997at 1033.150 kb on - strand, within B158DRAFT_0997at 1033.189 kb on - strand, within B158DRAFT_0997at 1033.194 kb on - strand, within B158DRAFT_0997at 1033.245 kb on - strand, within B158DRAFT_0997at 1033.245 kb on - strand, within B158DRAFT_0997at 1033.306 kb on + strand, within B158DRAFT_0997at 1033.306 kb on + strand, within B158DRAFT_0997at 1033.314 kb on - strand, within B158DRAFT_0997at 1033.316 kb on + strand, within B158DRAFT_0997at 1033.353 kb on - strand, within B158DRAFT_0997at 1033.355 kb on + strand, within B158DRAFT_0997at 1033.358 kb on + strand, within B158DRAFT_0997at 1033.358 kb on + strand, within B158DRAFT_0997at 1033.368 kb on - strand, within B158DRAFT_0997at 1033.408 kb on + strand, within B158DRAFT_0997at 1033.435 kb on + strand, within B158DRAFT_0997at 1033.435 kb on + strand, within B158DRAFT_0997at 1033.445 kb on + strand, within B158DRAFT_0997at 1033.577 kb on - strand, within B158DRAFT_0997at 1033.616 kb on + strand, within B158DRAFT_0997at 1033.618 kb on + strand, within B158DRAFT_0997at 1033.684 kb on - strand, within B158DRAFT_0997at 1033.697 kb on + strand, within B158DRAFT_0997at 1033.697 kb on + strand, within B158DRAFT_0997at 1033.697 kb on + strand, within B158DRAFT_0997at 1033.697 kb on + strand, within B158DRAFT_0997at 1033.697 kb on + strand, within B158DRAFT_0997at 1033.697 kb on + strand, within B158DRAFT_0997at 1033.705 kb on - strand, within B158DRAFT_0997at 1033.705 kb on - strand, within B158DRAFT_0997at 1033.705 kb on - strand, within B158DRAFT_0997at 1033.800 kb on + strandat 1033.804 kb on + strandat 1033.814 kb on - strandat 1033.873 kb on - strandat 1033.873 kb on - strandat 1033.910 kb on + strandat 1033.910 kb on + strandat 1033.910 kb on + strandat 1033.945 kb on - strandat 1033.963 kb on + strandat 1034.013 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.00390625 mg/ml
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1,030,716 + -0.3
1,030,801 - B158DRAFT_0996 0.17 -0.2
1,030,807 + B158DRAFT_0996 0.17 -0.8
1,030,832 - B158DRAFT_0996 0.20 -0.6
1,030,847 + B158DRAFT_0996 0.21 -0.8
1,030,932 + B158DRAFT_0996 0.30 -0.4
1,031,066 - B158DRAFT_0996 0.43 +0.7
1,031,098 - B158DRAFT_0996 0.46 -0.6
1,031,098 - B158DRAFT_0996 0.46 -0.5
1,031,100 + B158DRAFT_0996 0.46 -0.2
1,031,109 - B158DRAFT_0996 0.47 -0.9
1,031,155 - B158DRAFT_0996 0.52 +0.0
1,031,155 - B158DRAFT_0996 0.52 -0.2
1,031,155 - B158DRAFT_0996 0.52 -1.4
1,031,212 + B158DRAFT_0996 0.58 -0.7
1,031,271 + B158DRAFT_0996 0.63 +4.5
1,031,554 + -0.5
1,031,654 + +1.4
1,031,733 + -1.0
1,031,842 + -0.4
1,031,883 - +0.5
1,032,006 - B158DRAFT_0997 0.14 -0.9
1,032,030 + B158DRAFT_0997 0.15 -1.6
1,032,035 - B158DRAFT_0997 0.15 -0.2
1,032,133 + B158DRAFT_0997 0.20 -1.5
1,032,303 - B158DRAFT_0997 0.27 +0.2
1,032,325 - B158DRAFT_0997 0.28 -1.2
1,032,342 + B158DRAFT_0997 0.29 +0.4
1,032,418 + B158DRAFT_0997 0.32 -0.5
1,032,423 + B158DRAFT_0997 0.32 -0.6
1,032,423 + B158DRAFT_0997 0.32 -1.3
1,032,431 - B158DRAFT_0997 0.32 -0.7
1,032,431 - B158DRAFT_0997 0.32 +0.8
1,032,431 - B158DRAFT_0997 0.32 -0.9
1,032,456 + B158DRAFT_0997 0.33 +0.1
1,032,456 + B158DRAFT_0997 0.33 -0.7
1,032,528 + B158DRAFT_0997 0.36 +0.2
1,032,535 - B158DRAFT_0997 0.37 -0.8
1,032,594 + B158DRAFT_0997 0.39 -1.4
1,032,594 + B158DRAFT_0997 0.39 -0.4
1,032,602 - B158DRAFT_0997 0.40 +0.2
1,032,610 + B158DRAFT_0997 0.40 -1.0
1,032,610 + B158DRAFT_0997 0.40 +0.7
1,032,625 + B158DRAFT_0997 0.41 -0.7
1,032,628 - B158DRAFT_0997 0.41 -0.3
1,032,628 - B158DRAFT_0997 0.41 +0.6
1,032,628 - B158DRAFT_0997 0.41 -0.9
1,032,630 + B158DRAFT_0997 0.41 +0.1
1,032,638 - B158DRAFT_0997 0.41 -0.9
1,032,659 - B158DRAFT_0997 0.42 -0.0
1,032,673 - B158DRAFT_0997 0.43 +0.1
1,032,675 + B158DRAFT_0997 0.43 -1.0
1,032,675 + B158DRAFT_0997 0.43 +0.9
1,032,675 + B158DRAFT_0997 0.43 -0.5
1,032,675 + B158DRAFT_0997 0.43 -1.0
1,032,680 + B158DRAFT_0997 0.43 -0.7
1,032,680 + B158DRAFT_0997 0.43 +0.0
1,032,683 - B158DRAFT_0997 0.43 -0.3
1,032,688 - B158DRAFT_0997 0.43 +2.1
1,032,688 - B158DRAFT_0997 0.43 -0.2
1,032,688 - B158DRAFT_0997 0.43 -0.7
1,032,720 - B158DRAFT_0997 0.45 +0.2
1,032,808 - B158DRAFT_0997 0.48 +0.0
1,032,942 - B158DRAFT_0997 0.54 -1.5
1,033,061 + B158DRAFT_0997 0.59 -0.1
1,033,101 + B158DRAFT_0997 0.61 -1.7
1,033,107 + B158DRAFT_0997 0.61 -0.7
1,033,115 - B158DRAFT_0997 0.61 -0.2
1,033,135 + B158DRAFT_0997 0.62 +0.9
1,033,135 + B158DRAFT_0997 0.62 -1.9
1,033,150 - B158DRAFT_0997 0.63 +0.1
1,033,189 - B158DRAFT_0997 0.65 -1.1
1,033,194 - B158DRAFT_0997 0.65 -0.9
1,033,245 - B158DRAFT_0997 0.67 -1.3
1,033,245 - B158DRAFT_0997 0.67 -1.1
1,033,306 + B158DRAFT_0997 0.70 -2.0
1,033,306 + B158DRAFT_0997 0.70 +1.5
1,033,314 - B158DRAFT_0997 0.70 +0.2
1,033,316 + B158DRAFT_0997 0.70 -0.9
1,033,353 - B158DRAFT_0997 0.72 +0.1
1,033,355 + B158DRAFT_0997 0.72 -0.1
1,033,358 + B158DRAFT_0997 0.72 -0.2
1,033,358 + B158DRAFT_0997 0.72 -0.3
1,033,368 - B158DRAFT_0997 0.72 -0.2
1,033,408 + B158DRAFT_0997 0.74 -0.3
1,033,435 + B158DRAFT_0997 0.75 -0.4
1,033,435 + B158DRAFT_0997 0.75 -0.6
1,033,445 + B158DRAFT_0997 0.75 +0.2
1,033,577 - B158DRAFT_0997 0.81 -0.8
1,033,616 + B158DRAFT_0997 0.83 -1.7
1,033,618 + B158DRAFT_0997 0.83 -1.0
1,033,684 - B158DRAFT_0997 0.86 -1.1
1,033,697 + B158DRAFT_0997 0.86 -1.4
1,033,697 + B158DRAFT_0997 0.86 -0.0
1,033,697 + B158DRAFT_0997 0.86 -1.1
1,033,697 + B158DRAFT_0997 0.86 -3.2
1,033,697 + B158DRAFT_0997 0.86 +0.5
1,033,697 + B158DRAFT_0997 0.86 +1.0
1,033,705 - B158DRAFT_0997 0.87 -0.9
1,033,705 - B158DRAFT_0997 0.87 -1.0
1,033,705 - B158DRAFT_0997 0.87 -0.2
1,033,800 + -1.2
1,033,804 + -1.2
1,033,814 - -0.8
1,033,873 - -1.0
1,033,873 - +0.4
1,033,910 + -0.5
1,033,910 + -0.5
1,033,910 + -0.1
1,033,945 - -0.8
1,033,963 + +1.5
1,034,013 - -0.7

Or see this region's nucleotide sequence