Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0962

Experiment: m.b. Paraquat dichloride 0.00390625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0961 and B158DRAFT_0962 overlap by 4 nucleotidesB158DRAFT_0962 and B158DRAFT_0963 are separated by 192 nucleotides B158DRAFT_0961: B158DRAFT_0961 - hypothetical protein, at 992,063 to 993,115 _0961 B158DRAFT_0962: B158DRAFT_0962 - Restriction endonuclease, at 993,112 to 994,197 _0962 B158DRAFT_0963: B158DRAFT_0963 - Site-specific recombinase XerD, at 994,390 to 996,174 _0963 Position (kb) 993 994 995Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 992.319 kb on + strand, within B158DRAFT_0961at 992.429 kb on - strand, within B158DRAFT_0961at 992.431 kb on + strand, within B158DRAFT_0961at 992.439 kb on - strand, within B158DRAFT_0961at 992.439 kb on - strand, within B158DRAFT_0961at 992.439 kb on - strand, within B158DRAFT_0961at 992.793 kb on + strand, within B158DRAFT_0961at 992.801 kb on - strand, within B158DRAFT_0961at 992.873 kb on + strand, within B158DRAFT_0961at 992.875 kb on + strand, within B158DRAFT_0961at 992.883 kb on - strand, within B158DRAFT_0961at 992.908 kb on + strand, within B158DRAFT_0961at 992.908 kb on + strand, within B158DRAFT_0961at 992.908 kb on + strand, within B158DRAFT_0961at 992.913 kb on + strand, within B158DRAFT_0961at 992.916 kb on - strand, within B158DRAFT_0961at 992.916 kb on - strand, within B158DRAFT_0961at 992.916 kb on - strand, within B158DRAFT_0961at 992.916 kb on - strand, within B158DRAFT_0961at 992.916 kb on - strand, within B158DRAFT_0961at 992.916 kb on - strand, within B158DRAFT_0961at 993.022 kb on + strandat 993.306 kb on + strand, within B158DRAFT_0962at 993.314 kb on - strand, within B158DRAFT_0962at 993.354 kb on + strand, within B158DRAFT_0962at 993.405 kb on - strand, within B158DRAFT_0962at 993.573 kb on + strand, within B158DRAFT_0962at 993.581 kb on - strand, within B158DRAFT_0962at 993.842 kb on + strand, within B158DRAFT_0962at 993.848 kb on - strand, within B158DRAFT_0962at 994.168 kb on + strandat 994.168 kb on + strandat 994.367 kb on - strandat 994.391 kb on - strandat 994.619 kb on - strand, within B158DRAFT_0963at 994.669 kb on - strand, within B158DRAFT_0963at 994.739 kb on + strand, within B158DRAFT_0963at 994.832 kb on - strand, within B158DRAFT_0963at 994.832 kb on - strand, within B158DRAFT_0963at 994.832 kb on - strand, within B158DRAFT_0963at 995.053 kb on + strand, within B158DRAFT_0963at 995.102 kb on + strand, within B158DRAFT_0963at 995.113 kb on - strand, within B158DRAFT_0963

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.00390625 mg/ml
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992,319 + B158DRAFT_0961 0.24 +0.9
992,429 - B158DRAFT_0961 0.35 -0.3
992,431 + B158DRAFT_0961 0.35 -0.9
992,439 - B158DRAFT_0961 0.36 -2.1
992,439 - B158DRAFT_0961 0.36 -0.5
992,439 - B158DRAFT_0961 0.36 -0.8
992,793 + B158DRAFT_0961 0.69 +1.1
992,801 - B158DRAFT_0961 0.70 -2.8
992,873 + B158DRAFT_0961 0.77 +0.2
992,875 + B158DRAFT_0961 0.77 -0.5
992,883 - B158DRAFT_0961 0.78 +0.9
992,908 + B158DRAFT_0961 0.80 +2.7
992,908 + B158DRAFT_0961 0.80 -1.1
992,908 + B158DRAFT_0961 0.80 -0.8
992,913 + B158DRAFT_0961 0.81 -0.3
992,916 - B158DRAFT_0961 0.81 -0.5
992,916 - B158DRAFT_0961 0.81 +0.4
992,916 - B158DRAFT_0961 0.81 -0.3
992,916 - B158DRAFT_0961 0.81 -0.2
992,916 - B158DRAFT_0961 0.81 -1.1
992,916 - B158DRAFT_0961 0.81 +0.5
993,022 + -0.4
993,306 + B158DRAFT_0962 0.18 -0.7
993,314 - B158DRAFT_0962 0.19 -0.2
993,354 + B158DRAFT_0962 0.22 -0.0
993,405 - B158DRAFT_0962 0.27 +0.2
993,573 + B158DRAFT_0962 0.42 -2.5
993,581 - B158DRAFT_0962 0.43 -0.7
993,842 + B158DRAFT_0962 0.67 -1.1
993,848 - B158DRAFT_0962 0.68 +0.0
994,168 + -0.3
994,168 + -0.7
994,367 - -0.7
994,391 - -0.7
994,619 - B158DRAFT_0963 0.13 -0.4
994,669 - B158DRAFT_0963 0.16 -0.1
994,739 + B158DRAFT_0963 0.20 -0.7
994,832 - B158DRAFT_0963 0.25 -0.1
994,832 - B158DRAFT_0963 0.25 -1.0
994,832 - B158DRAFT_0963 0.25 -0.6
995,053 + B158DRAFT_0963 0.37 -0.1
995,102 + B158DRAFT_0963 0.40 +0.2
995,113 - B158DRAFT_0963 0.41 -0.4

Or see this region's nucleotide sequence