Experiment: m.b. Paraquat dichloride 0.00390625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0953 and B158DRAFT_0954 are separated by 216 nucleotides B158DRAFT_0954 and B158DRAFT_0955 are separated by 1 nucleotides
B158DRAFT_0953: B158DRAFT_0953 - K+-dependent Na+/Ca+ exchanger related-protein, at 981,178 to 982,146
_0953
B158DRAFT_0954: B158DRAFT_0954 - diguanylate cyclase (GGDEF) domain, at 982,363 to 983,769
_0954
B158DRAFT_0955: B158DRAFT_0955 - PAS domain S-box/diguanylate cyclase (GGDEF) domain, at 983,771 to 986,338
_0955
Position (kb) 982
983
984 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4
5
6 at 981.398 kb on + strand, within B158DRAFT_0953 at 981.398 kb on - strand, within B158DRAFT_0953 at 981.406 kb on - strand, within B158DRAFT_0953 at 981.406 kb on - strand, within B158DRAFT_0953 at 981.408 kb on + strand, within B158DRAFT_0953 at 981.416 kb on - strand, within B158DRAFT_0953 at 981.416 kb on - strand, within B158DRAFT_0953 at 981.416 kb on - strand, within B158DRAFT_0953 at 981.416 kb on - strand, within B158DRAFT_0953 at 981.430 kb on - strand, within B158DRAFT_0953 at 981.446 kb on - strand, within B158DRAFT_0953 at 981.545 kb on - strand, within B158DRAFT_0953 at 981.545 kb on - strand, within B158DRAFT_0953 at 981.547 kb on - strand, within B158DRAFT_0953 at 981.547 kb on - strand, within B158DRAFT_0953 at 981.566 kb on + strand, within B158DRAFT_0953 at 981.566 kb on + strand, within B158DRAFT_0953 at 981.566 kb on + strand, within B158DRAFT_0953 at 981.566 kb on + strand, within B158DRAFT_0953 at 981.566 kb on + strand, within B158DRAFT_0953 at 981.579 kb on + strand, within B158DRAFT_0953 at 981.579 kb on + strand, within B158DRAFT_0953 at 981.587 kb on - strand, within B158DRAFT_0953 at 981.617 kb on + strand, within B158DRAFT_0953 at 981.654 kb on - strand, within B158DRAFT_0953 at 981.727 kb on - strand, within B158DRAFT_0953 at 981.778 kb on + strand, within B158DRAFT_0953 at 981.812 kb on - strand, within B158DRAFT_0953 at 981.874 kb on + strand, within B158DRAFT_0953 at 981.882 kb on - strand, within B158DRAFT_0953 at 981.883 kb on + strand, within B158DRAFT_0953 at 981.929 kb on + strand, within B158DRAFT_0953 at 981.934 kb on + strand, within B158DRAFT_0953 at 981.934 kb on + strand, within B158DRAFT_0953 at 981.934 kb on + strand, within B158DRAFT_0953 at 981.942 kb on - strand, within B158DRAFT_0953 at 981.950 kb on + strand, within B158DRAFT_0953 at 981.950 kb on + strand, within B158DRAFT_0953 at 981.955 kb on + strand, within B158DRAFT_0953 at 981.958 kb on - strand, within B158DRAFT_0953 at 981.963 kb on - strand, within B158DRAFT_0953 at 981.963 kb on - strand, within B158DRAFT_0953 at 982.051 kb on - strand at 982.143 kb on + strand at 982.151 kb on - strand at 982.167 kb on - strand at 982.283 kb on - strand at 982.301 kb on + strand at 982.386 kb on - strand at 982.390 kb on + strand at 982.419 kb on - strand at 982.507 kb on + strand, within B158DRAFT_0954 at 982.514 kb on + strand, within B158DRAFT_0954 at 982.515 kb on - strand, within B158DRAFT_0954 at 982.548 kb on + strand, within B158DRAFT_0954 at 982.556 kb on - strand, within B158DRAFT_0954 at 982.647 kb on + strand, within B158DRAFT_0954 at 982.710 kb on + strand, within B158DRAFT_0954 at 982.729 kb on - strand, within B158DRAFT_0954 at 982.792 kb on - strand, within B158DRAFT_0954 at 982.802 kb on - strand, within B158DRAFT_0954 at 982.807 kb on + strand, within B158DRAFT_0954 at 982.807 kb on + strand, within B158DRAFT_0954 at 982.807 kb on + strand, within B158DRAFT_0954 at 982.807 kb on + strand, within B158DRAFT_0954 at 982.937 kb on - strand, within B158DRAFT_0954 at 982.972 kb on + strand, within B158DRAFT_0954 at 983.004 kb on + strand, within B158DRAFT_0954 at 983.009 kb on + strand, within B158DRAFT_0954 at 983.009 kb on + strand, within B158DRAFT_0954 at 983.009 kb on + strand, within B158DRAFT_0954 at 983.009 kb on + strand, within B158DRAFT_0954 at 983.017 kb on - strand, within B158DRAFT_0954 at 983.017 kb on - strand, within B158DRAFT_0954 at 983.017 kb on - strand, within B158DRAFT_0954 at 983.027 kb on - strand, within B158DRAFT_0954 at 983.064 kb on - strand, within B158DRAFT_0954 at 983.082 kb on - strand, within B158DRAFT_0954 at 983.116 kb on - strand, within B158DRAFT_0954 at 983.227 kb on + strand, within B158DRAFT_0954 at 983.285 kb on - strand, within B158DRAFT_0954 at 983.638 kb on - strand at 983.644 kb on - strand at 983.652 kb on + strand at 983.652 kb on + strand at 983.654 kb on - strand at 983.660 kb on - strand at 983.710 kb on + strand at 983.783 kb on + strand at 984.015 kb on + strand at 984.154 kb on - strand, within B158DRAFT_0955 at 984.154 kb on - strand, within B158DRAFT_0955 at 984.154 kb on - strand, within B158DRAFT_0955 at 984.156 kb on + strand, within B158DRAFT_0955 at 984.164 kb on - strand, within B158DRAFT_0955 at 984.172 kb on + strand, within B158DRAFT_0955 at 984.172 kb on + strand, within B158DRAFT_0955 at 984.180 kb on - strand, within B158DRAFT_0955 at 984.207 kb on - strand, within B158DRAFT_0955 at 984.255 kb on + strand, within B158DRAFT_0955 at 984.308 kb on - strand, within B158DRAFT_0955 at 984.309 kb on - strand, within B158DRAFT_0955 at 984.310 kb on - strand, within B158DRAFT_0955 at 984.310 kb on - strand, within B158DRAFT_0955 at 984.515 kb on + strand, within B158DRAFT_0955 at 984.522 kb on + strand, within B158DRAFT_0955 at 984.534 kb on + strand, within B158DRAFT_0955 at 984.566 kb on - strand, within B158DRAFT_0955 at 984.663 kb on + strand, within B158DRAFT_0955 at 984.752 kb on + strand, within B158DRAFT_0955 at 984.752 kb on + strand, within B158DRAFT_0955 at 984.756 kb on + strand, within B158DRAFT_0955
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.00390625 mg/ml remove 981,398 + B158DRAFT_0953 0.23 +0.3 981,398 - B158DRAFT_0953 0.23 -0.0 981,406 - B158DRAFT_0953 0.24 +0.7 981,406 - B158DRAFT_0953 0.24 +0.5 981,408 + B158DRAFT_0953 0.24 -0.4 981,416 - B158DRAFT_0953 0.25 -0.4 981,416 - B158DRAFT_0953 0.25 -0.9 981,416 - B158DRAFT_0953 0.25 +6.7 981,416 - B158DRAFT_0953 0.25 -0.5 981,430 - B158DRAFT_0953 0.26 -0.1 981,446 - B158DRAFT_0953 0.28 -0.3 981,545 - B158DRAFT_0953 0.38 -2.6 981,545 - B158DRAFT_0953 0.38 -1.3 981,547 - B158DRAFT_0953 0.38 -0.8 981,547 - B158DRAFT_0953 0.38 +0.0 981,566 + B158DRAFT_0953 0.40 -0.3 981,566 + B158DRAFT_0953 0.40 -0.2 981,566 + B158DRAFT_0953 0.40 -0.5 981,566 + B158DRAFT_0953 0.40 -0.1 981,566 + B158DRAFT_0953 0.40 -0.0 981,579 + B158DRAFT_0953 0.41 +0.2 981,579 + B158DRAFT_0953 0.41 +0.5 981,587 - B158DRAFT_0953 0.42 -0.5 981,617 + B158DRAFT_0953 0.45 +0.5 981,654 - B158DRAFT_0953 0.49 -0.5 981,727 - B158DRAFT_0953 0.57 -1.3 981,778 + B158DRAFT_0953 0.62 +0.0 981,812 - B158DRAFT_0953 0.65 +1.7 981,874 + B158DRAFT_0953 0.72 -1.8 981,882 - B158DRAFT_0953 0.73 -0.8 981,883 + B158DRAFT_0953 0.73 -0.4 981,929 + B158DRAFT_0953 0.78 +0.7 981,934 + B158DRAFT_0953 0.78 +0.3 981,934 + B158DRAFT_0953 0.78 +0.5 981,934 + B158DRAFT_0953 0.78 -0.5 981,942 - B158DRAFT_0953 0.79 -0.3 981,950 + B158DRAFT_0953 0.80 -1.2 981,950 + B158DRAFT_0953 0.80 -0.2 981,955 + B158DRAFT_0953 0.80 -0.4 981,958 - B158DRAFT_0953 0.80 -0.1 981,963 - B158DRAFT_0953 0.81 -1.0 981,963 - B158DRAFT_0953 0.81 -0.2 982,051 - -0.3 982,143 + -0.4 982,151 - +0.1 982,167 - +0.4 982,283 - -1.5 982,301 + +0.0 982,386 - -1.9 982,390 + -0.5 982,419 - -2.7 982,507 + B158DRAFT_0954 0.10 -1.0 982,514 + B158DRAFT_0954 0.11 -0.7 982,515 - B158DRAFT_0954 0.11 +0.8 982,548 + B158DRAFT_0954 0.13 -1.0 982,556 - B158DRAFT_0954 0.14 -0.6 982,647 + B158DRAFT_0954 0.20 -0.8 982,710 + B158DRAFT_0954 0.25 +0.4 982,729 - B158DRAFT_0954 0.26 -0.1 982,792 - B158DRAFT_0954 0.30 -0.5 982,802 - B158DRAFT_0954 0.31 +0.7 982,807 + B158DRAFT_0954 0.32 -0.1 982,807 + B158DRAFT_0954 0.32 -0.5 982,807 + B158DRAFT_0954 0.32 -0.4 982,807 + B158DRAFT_0954 0.32 -0.2 982,937 - B158DRAFT_0954 0.41 +0.2 982,972 + B158DRAFT_0954 0.43 -0.9 983,004 + B158DRAFT_0954 0.46 -0.2 983,009 + B158DRAFT_0954 0.46 -2.1 983,009 + B158DRAFT_0954 0.46 -0.5 983,009 + B158DRAFT_0954 0.46 -0.9 983,009 + B158DRAFT_0954 0.46 +3.5 983,017 - B158DRAFT_0954 0.46 -0.4 983,017 - B158DRAFT_0954 0.46 -0.5 983,017 - B158DRAFT_0954 0.46 +0.2 983,027 - B158DRAFT_0954 0.47 +0.9 983,064 - B158DRAFT_0954 0.50 +0.1 983,082 - B158DRAFT_0954 0.51 -0.3 983,116 - B158DRAFT_0954 0.54 +0.8 983,227 + B158DRAFT_0954 0.61 -0.7 983,285 - B158DRAFT_0954 0.66 -0.5 983,638 - +0.2 983,644 - -0.5 983,652 + -0.9 983,652 + -0.4 983,654 - -0.1 983,660 - -0.4 983,710 + -0.8 983,783 + -1.7 984,015 + +3.0 984,154 - B158DRAFT_0955 0.15 -0.8 984,154 - B158DRAFT_0955 0.15 +0.2 984,154 - B158DRAFT_0955 0.15 -0.5 984,156 + B158DRAFT_0955 0.15 +1.7 984,164 - B158DRAFT_0955 0.15 -0.4 984,172 + B158DRAFT_0955 0.16 +0.0 984,172 + B158DRAFT_0955 0.16 +3.7 984,180 - B158DRAFT_0955 0.16 +0.9 984,207 - B158DRAFT_0955 0.17 -0.5 984,255 + B158DRAFT_0955 0.19 +0.3 984,308 - B158DRAFT_0955 0.21 -0.0 984,309 - B158DRAFT_0955 0.21 -0.3 984,310 - B158DRAFT_0955 0.21 -0.3 984,310 - B158DRAFT_0955 0.21 +0.2 984,515 + B158DRAFT_0955 0.29 -0.7 984,522 + B158DRAFT_0955 0.29 -0.1 984,534 + B158DRAFT_0955 0.30 -0.1 984,566 - B158DRAFT_0955 0.31 -0.3 984,663 + B158DRAFT_0955 0.35 -0.3 984,752 + B158DRAFT_0955 0.38 -0.2 984,752 + B158DRAFT_0955 0.38 -0.6 984,756 + B158DRAFT_0955 0.38 -0.3
Or see this region's nucleotide sequence