Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0953

Experiment: m.b. Paraquat dichloride 0.00390625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0952 and B158DRAFT_0953 overlap by 4 nucleotidesB158DRAFT_0953 and B158DRAFT_0954 are separated by 216 nucleotides B158DRAFT_0952: B158DRAFT_0952 - efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family, at 979,715 to 981,181 _0952 B158DRAFT_0953: B158DRAFT_0953 - K+-dependent Na+/Ca+ exchanger related-protein, at 981,178 to 982,146 _0953 B158DRAFT_0954: B158DRAFT_0954 - diguanylate cyclase (GGDEF) domain, at 982,363 to 983,769 _0954 Position (kb) 981 982 983Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5 6at 980.187 kb on + strand, within B158DRAFT_0952at 980.195 kb on - strand, within B158DRAFT_0952at 980.210 kb on - strand, within B158DRAFT_0952at 980.217 kb on + strand, within B158DRAFT_0952at 980.244 kb on + strand, within B158DRAFT_0952at 980.247 kb on - strand, within B158DRAFT_0952at 980.279 kb on + strand, within B158DRAFT_0952at 980.279 kb on + strand, within B158DRAFT_0952at 980.306 kb on + strand, within B158DRAFT_0952at 980.308 kb on + strand, within B158DRAFT_0952at 980.316 kb on - strand, within B158DRAFT_0952at 980.316 kb on - strand, within B158DRAFT_0952at 980.328 kb on + strand, within B158DRAFT_0952at 980.422 kb on + strand, within B158DRAFT_0952at 980.585 kb on - strand, within B158DRAFT_0952at 980.619 kb on - strand, within B158DRAFT_0952at 980.961 kb on + strand, within B158DRAFT_0952at 980.966 kb on + strand, within B158DRAFT_0952at 980.999 kb on - strand, within B158DRAFT_0952at 981.045 kb on - strandat 981.069 kb on + strandat 981.106 kb on + strandat 981.106 kb on + strandat 981.106 kb on + strandat 981.114 kb on - strandat 981.114 kb on - strandat 981.114 kb on - strandat 981.170 kb on - strandat 981.204 kb on - strandat 981.217 kb on + strandat 981.270 kb on - strandat 981.304 kb on + strand, within B158DRAFT_0953at 981.307 kb on + strand, within B158DRAFT_0953at 981.312 kb on - strand, within B158DRAFT_0953at 981.314 kb on + strand, within B158DRAFT_0953at 981.314 kb on + strand, within B158DRAFT_0953at 981.314 kb on + strand, within B158DRAFT_0953at 981.314 kb on + strand, within B158DRAFT_0953at 981.322 kb on - strand, within B158DRAFT_0953at 981.322 kb on - strand, within B158DRAFT_0953at 981.322 kb on - strand, within B158DRAFT_0953at 981.322 kb on - strand, within B158DRAFT_0953at 981.322 kb on - strand, within B158DRAFT_0953at 981.322 kb on - strand, within B158DRAFT_0953at 981.349 kb on - strand, within B158DRAFT_0953at 981.350 kb on - strand, within B158DRAFT_0953at 981.398 kb on + strand, within B158DRAFT_0953at 981.398 kb on - strand, within B158DRAFT_0953at 981.406 kb on - strand, within B158DRAFT_0953at 981.406 kb on - strand, within B158DRAFT_0953at 981.408 kb on + strand, within B158DRAFT_0953at 981.416 kb on - strand, within B158DRAFT_0953at 981.416 kb on - strand, within B158DRAFT_0953at 981.416 kb on - strand, within B158DRAFT_0953at 981.416 kb on - strand, within B158DRAFT_0953at 981.430 kb on - strand, within B158DRAFT_0953at 981.446 kb on - strand, within B158DRAFT_0953at 981.545 kb on - strand, within B158DRAFT_0953at 981.545 kb on - strand, within B158DRAFT_0953at 981.547 kb on - strand, within B158DRAFT_0953at 981.547 kb on - strand, within B158DRAFT_0953at 981.566 kb on + strand, within B158DRAFT_0953at 981.566 kb on + strand, within B158DRAFT_0953at 981.566 kb on + strand, within B158DRAFT_0953at 981.566 kb on + strand, within B158DRAFT_0953at 981.566 kb on + strand, within B158DRAFT_0953at 981.579 kb on + strand, within B158DRAFT_0953at 981.579 kb on + strand, within B158DRAFT_0953at 981.587 kb on - strand, within B158DRAFT_0953at 981.617 kb on + strand, within B158DRAFT_0953at 981.654 kb on - strand, within B158DRAFT_0953at 981.727 kb on - strand, within B158DRAFT_0953at 981.778 kb on + strand, within B158DRAFT_0953at 981.812 kb on - strand, within B158DRAFT_0953at 981.874 kb on + strand, within B158DRAFT_0953at 981.882 kb on - strand, within B158DRAFT_0953at 981.883 kb on + strand, within B158DRAFT_0953at 981.929 kb on + strand, within B158DRAFT_0953at 981.934 kb on + strand, within B158DRAFT_0953at 981.934 kb on + strand, within B158DRAFT_0953at 981.934 kb on + strand, within B158DRAFT_0953at 981.942 kb on - strand, within B158DRAFT_0953at 981.950 kb on + strand, within B158DRAFT_0953at 981.950 kb on + strand, within B158DRAFT_0953at 981.955 kb on + strand, within B158DRAFT_0953at 981.958 kb on - strand, within B158DRAFT_0953at 981.963 kb on - strand, within B158DRAFT_0953at 981.963 kb on - strand, within B158DRAFT_0953at 982.051 kb on - strandat 982.143 kb on + strandat 982.151 kb on - strandat 982.167 kb on - strandat 982.283 kb on - strandat 982.301 kb on + strandat 982.386 kb on - strandat 982.390 kb on + strandat 982.419 kb on - strandat 982.507 kb on + strand, within B158DRAFT_0954at 982.514 kb on + strand, within B158DRAFT_0954at 982.515 kb on - strand, within B158DRAFT_0954at 982.548 kb on + strand, within B158DRAFT_0954at 982.556 kb on - strand, within B158DRAFT_0954at 982.647 kb on + strand, within B158DRAFT_0954at 982.710 kb on + strand, within B158DRAFT_0954at 982.729 kb on - strand, within B158DRAFT_0954at 982.792 kb on - strand, within B158DRAFT_0954at 982.802 kb on - strand, within B158DRAFT_0954at 982.807 kb on + strand, within B158DRAFT_0954at 982.807 kb on + strand, within B158DRAFT_0954at 982.807 kb on + strand, within B158DRAFT_0954at 982.807 kb on + strand, within B158DRAFT_0954at 982.937 kb on - strand, within B158DRAFT_0954at 982.972 kb on + strand, within B158DRAFT_0954at 983.004 kb on + strand, within B158DRAFT_0954at 983.009 kb on + strand, within B158DRAFT_0954at 983.009 kb on + strand, within B158DRAFT_0954at 983.009 kb on + strand, within B158DRAFT_0954at 983.009 kb on + strand, within B158DRAFT_0954at 983.017 kb on - strand, within B158DRAFT_0954at 983.017 kb on - strand, within B158DRAFT_0954at 983.017 kb on - strand, within B158DRAFT_0954at 983.027 kb on - strand, within B158DRAFT_0954at 983.064 kb on - strand, within B158DRAFT_0954at 983.082 kb on - strand, within B158DRAFT_0954at 983.116 kb on - strand, within B158DRAFT_0954

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.00390625 mg/ml
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980,187 + B158DRAFT_0952 0.32 -0.1
980,195 - B158DRAFT_0952 0.33 +0.9
980,210 - B158DRAFT_0952 0.34 -0.8
980,217 + B158DRAFT_0952 0.34 +0.3
980,244 + B158DRAFT_0952 0.36 +0.2
980,247 - B158DRAFT_0952 0.36 +0.8
980,279 + B158DRAFT_0952 0.38 +0.3
980,279 + B158DRAFT_0952 0.38 +0.0
980,306 + B158DRAFT_0952 0.40 +3.9
980,308 + B158DRAFT_0952 0.40 -0.1
980,316 - B158DRAFT_0952 0.41 -0.4
980,316 - B158DRAFT_0952 0.41 -1.0
980,328 + B158DRAFT_0952 0.42 +1.3
980,422 + B158DRAFT_0952 0.48 -0.6
980,585 - B158DRAFT_0952 0.59 -1.2
980,619 - B158DRAFT_0952 0.62 -0.4
980,961 + B158DRAFT_0952 0.85 -0.1
980,966 + B158DRAFT_0952 0.85 +1.4
980,999 - B158DRAFT_0952 0.88 -0.3
981,045 - -0.3
981,069 + -0.4
981,106 + +0.1
981,106 + -1.1
981,106 + +0.8
981,114 - -0.3
981,114 - -0.3
981,114 - +0.2
981,170 - +0.6
981,204 - -0.5
981,217 + +0.0
981,270 - -0.4
981,304 + B158DRAFT_0953 0.13 -0.4
981,307 + B158DRAFT_0953 0.13 -1.1
981,312 - B158DRAFT_0953 0.14 +0.4
981,314 + B158DRAFT_0953 0.14 -0.3
981,314 + B158DRAFT_0953 0.14 +0.6
981,314 + B158DRAFT_0953 0.14 -0.2
981,314 + B158DRAFT_0953 0.14 -0.3
981,322 - B158DRAFT_0953 0.15 -0.8
981,322 - B158DRAFT_0953 0.15 -0.2
981,322 - B158DRAFT_0953 0.15 -0.0
981,322 - B158DRAFT_0953 0.15 -0.0
981,322 - B158DRAFT_0953 0.15 +5.3
981,322 - B158DRAFT_0953 0.15 +0.6
981,349 - B158DRAFT_0953 0.18 -0.7
981,350 - B158DRAFT_0953 0.18 -0.4
981,398 + B158DRAFT_0953 0.23 +0.3
981,398 - B158DRAFT_0953 0.23 -0.0
981,406 - B158DRAFT_0953 0.24 +0.7
981,406 - B158DRAFT_0953 0.24 +0.5
981,408 + B158DRAFT_0953 0.24 -0.4
981,416 - B158DRAFT_0953 0.25 -0.4
981,416 - B158DRAFT_0953 0.25 -0.9
981,416 - B158DRAFT_0953 0.25 +6.7
981,416 - B158DRAFT_0953 0.25 -0.5
981,430 - B158DRAFT_0953 0.26 -0.1
981,446 - B158DRAFT_0953 0.28 -0.3
981,545 - B158DRAFT_0953 0.38 -2.6
981,545 - B158DRAFT_0953 0.38 -1.3
981,547 - B158DRAFT_0953 0.38 -0.8
981,547 - B158DRAFT_0953 0.38 +0.0
981,566 + B158DRAFT_0953 0.40 -0.3
981,566 + B158DRAFT_0953 0.40 -0.2
981,566 + B158DRAFT_0953 0.40 -0.5
981,566 + B158DRAFT_0953 0.40 -0.1
981,566 + B158DRAFT_0953 0.40 -0.0
981,579 + B158DRAFT_0953 0.41 +0.2
981,579 + B158DRAFT_0953 0.41 +0.5
981,587 - B158DRAFT_0953 0.42 -0.5
981,617 + B158DRAFT_0953 0.45 +0.5
981,654 - B158DRAFT_0953 0.49 -0.5
981,727 - B158DRAFT_0953 0.57 -1.3
981,778 + B158DRAFT_0953 0.62 +0.0
981,812 - B158DRAFT_0953 0.65 +1.7
981,874 + B158DRAFT_0953 0.72 -1.8
981,882 - B158DRAFT_0953 0.73 -0.8
981,883 + B158DRAFT_0953 0.73 -0.4
981,929 + B158DRAFT_0953 0.78 +0.7
981,934 + B158DRAFT_0953 0.78 +0.3
981,934 + B158DRAFT_0953 0.78 +0.5
981,934 + B158DRAFT_0953 0.78 -0.5
981,942 - B158DRAFT_0953 0.79 -0.3
981,950 + B158DRAFT_0953 0.80 -1.2
981,950 + B158DRAFT_0953 0.80 -0.2
981,955 + B158DRAFT_0953 0.80 -0.4
981,958 - B158DRAFT_0953 0.80 -0.1
981,963 - B158DRAFT_0953 0.81 -1.0
981,963 - B158DRAFT_0953 0.81 -0.2
982,051 - -0.3
982,143 + -0.4
982,151 - +0.1
982,167 - +0.4
982,283 - -1.5
982,301 + +0.0
982,386 - -1.9
982,390 + -0.5
982,419 - -2.7
982,507 + B158DRAFT_0954 0.10 -1.0
982,514 + B158DRAFT_0954 0.11 -0.7
982,515 - B158DRAFT_0954 0.11 +0.8
982,548 + B158DRAFT_0954 0.13 -1.0
982,556 - B158DRAFT_0954 0.14 -0.6
982,647 + B158DRAFT_0954 0.20 -0.8
982,710 + B158DRAFT_0954 0.25 +0.4
982,729 - B158DRAFT_0954 0.26 -0.1
982,792 - B158DRAFT_0954 0.30 -0.5
982,802 - B158DRAFT_0954 0.31 +0.7
982,807 + B158DRAFT_0954 0.32 -0.1
982,807 + B158DRAFT_0954 0.32 -0.5
982,807 + B158DRAFT_0954 0.32 -0.4
982,807 + B158DRAFT_0954 0.32 -0.2
982,937 - B158DRAFT_0954 0.41 +0.2
982,972 + B158DRAFT_0954 0.43 -0.9
983,004 + B158DRAFT_0954 0.46 -0.2
983,009 + B158DRAFT_0954 0.46 -2.1
983,009 + B158DRAFT_0954 0.46 -0.5
983,009 + B158DRAFT_0954 0.46 -0.9
983,009 + B158DRAFT_0954 0.46 +3.5
983,017 - B158DRAFT_0954 0.46 -0.4
983,017 - B158DRAFT_0954 0.46 -0.5
983,017 - B158DRAFT_0954 0.46 +0.2
983,027 - B158DRAFT_0954 0.47 +0.9
983,064 - B158DRAFT_0954 0.50 +0.1
983,082 - B158DRAFT_0954 0.51 -0.3
983,116 - B158DRAFT_0954 0.54 +0.8

Or see this region's nucleotide sequence