Experiment: m.b. Paraquat dichloride 0.00390625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0902 and B158DRAFT_0903 are separated by 181 nucleotides B158DRAFT_0903 and B158DRAFT_0904 are separated by 156 nucleotides B158DRAFT_0904 and B158DRAFT_0905 are separated by 76 nucleotides B158DRAFT_0905 and B158DRAFT_0906 are separated by 181 nucleotides
B158DRAFT_0902: B158DRAFT_0902 - phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1), at 926,592 to 927,548
_0902
B158DRAFT_0903: B158DRAFT_0903 - hypothetical protein, at 927,730 to 928,125
_0903
B158DRAFT_0904: B158DRAFT_0904 - 1-aminocyclopropane-1-carboxylate deaminase, at 928,282 to 929,145
_0904
B158DRAFT_0905: B158DRAFT_0905 - large conductance mechanosensitive channel protein, at 929,222 to 929,629
_0905
B158DRAFT_0906: B158DRAFT_0906 - Predicted membrane protein, at 929,811 to 930,278
_0906
Position (kb) 928
929
930 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 927.289 kb on + strand, within B158DRAFT_0902 at 927.692 kb on + strand at 927.814 kb on - strand, within B158DRAFT_0903 at 927.816 kb on + strand, within B158DRAFT_0903 at 927.824 kb on - strand, within B158DRAFT_0903 at 927.840 kb on + strand, within B158DRAFT_0903 at 927.848 kb on + strand, within B158DRAFT_0903 at 927.856 kb on - strand, within B158DRAFT_0903 at 927.931 kb on - strand, within B158DRAFT_0903 at 927.938 kb on + strand, within B158DRAFT_0903 at 927.938 kb on + strand, within B158DRAFT_0903 at 927.946 kb on - strand, within B158DRAFT_0903 at 927.946 kb on - strand, within B158DRAFT_0903 at 927.946 kb on - strand, within B158DRAFT_0903 at 927.946 kb on - strand, within B158DRAFT_0903 at 927.946 kb on - strand, within B158DRAFT_0903 at 928.133 kb on - strand at 928.201 kb on + strand at 928.201 kb on + strand at 928.209 kb on - strand at 928.209 kb on - strand at 928.209 kb on - strand at 928.346 kb on - strand at 928.388 kb on - strand, within B158DRAFT_0904 at 928.516 kb on + strand, within B158DRAFT_0904 at 928.620 kb on - strand, within B158DRAFT_0904 at 928.637 kb on - strand, within B158DRAFT_0904 at 928.829 kb on - strand, within B158DRAFT_0904 at 928.886 kb on - strand, within B158DRAFT_0904 at 928.893 kb on + strand, within B158DRAFT_0904 at 928.893 kb on + strand, within B158DRAFT_0904 at 928.901 kb on - strand, within B158DRAFT_0904 at 928.901 kb on - strand, within B158DRAFT_0904 at 928.901 kb on - strand, within B158DRAFT_0904 at 928.913 kb on - strand, within B158DRAFT_0904 at 928.973 kb on - strand, within B158DRAFT_0904 at 929.277 kb on + strand, within B158DRAFT_0905 at 929.280 kb on - strand, within B158DRAFT_0905 at 929.293 kb on - strand, within B158DRAFT_0905 at 929.345 kb on - strand, within B158DRAFT_0905 at 929.408 kb on + strand, within B158DRAFT_0905 at 929.408 kb on + strand, within B158DRAFT_0905 at 929.828 kb on - strand at 929.835 kb on + strand at 929.843 kb on - strand at 929.843 kb on - strand at 929.903 kb on + strand, within B158DRAFT_0906 at 929.908 kb on + strand, within B158DRAFT_0906 at 929.908 kb on + strand, within B158DRAFT_0906 at 929.913 kb on + strand, within B158DRAFT_0906 at 929.913 kb on + strand, within B158DRAFT_0906 at 929.913 kb on + strand, within B158DRAFT_0906 at 929.913 kb on + strand, within B158DRAFT_0906 at 929.913 kb on + strand, within B158DRAFT_0906 at 929.913 kb on + strand, within B158DRAFT_0906 at 929.967 kb on + strand, within B158DRAFT_0906 at 929.967 kb on + strand, within B158DRAFT_0906 at 930.060 kb on + strand, within B158DRAFT_0906 at 930.068 kb on - strand, within B158DRAFT_0906 at 930.079 kb on + strand, within B158DRAFT_0906 at 930.079 kb on + strand, within B158DRAFT_0906 at 930.087 kb on - strand, within B158DRAFT_0906 at 930.101 kb on + strand, within B158DRAFT_0906 at 930.109 kb on - strand, within B158DRAFT_0906 at 930.123 kb on + strand, within B158DRAFT_0906 at 930.134 kb on + strand, within B158DRAFT_0906
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.00390625 mg/ml remove 927,289 + B158DRAFT_0902 0.73 -0.3 927,692 + +0.4 927,814 - B158DRAFT_0903 0.21 -0.1 927,816 + B158DRAFT_0903 0.22 -0.2 927,824 - B158DRAFT_0903 0.24 -2.0 927,840 + B158DRAFT_0903 0.28 -1.3 927,848 + B158DRAFT_0903 0.30 -0.6 927,856 - B158DRAFT_0903 0.32 -0.6 927,931 - B158DRAFT_0903 0.51 -0.1 927,938 + B158DRAFT_0903 0.53 +0.1 927,938 + B158DRAFT_0903 0.53 -0.6 927,946 - B158DRAFT_0903 0.55 +0.3 927,946 - B158DRAFT_0903 0.55 -0.8 927,946 - B158DRAFT_0903 0.55 +0.1 927,946 - B158DRAFT_0903 0.55 -0.9 927,946 - B158DRAFT_0903 0.55 +0.0 928,133 - -0.0 928,201 + -1.1 928,201 + +0.1 928,209 - -0.2 928,209 - +0.8 928,209 - -0.1 928,346 - -0.1 928,388 - B158DRAFT_0904 0.12 +0.1 928,516 + B158DRAFT_0904 0.27 +0.5 928,620 - B158DRAFT_0904 0.39 -0.7 928,637 - B158DRAFT_0904 0.41 +1.1 928,829 - B158DRAFT_0904 0.63 -0.5 928,886 - B158DRAFT_0904 0.70 -0.8 928,893 + B158DRAFT_0904 0.71 -0.7 928,893 + B158DRAFT_0904 0.71 -1.1 928,901 - B158DRAFT_0904 0.72 -0.2 928,901 - B158DRAFT_0904 0.72 -1.3 928,901 - B158DRAFT_0904 0.72 -0.7 928,913 - B158DRAFT_0904 0.73 -1.1 928,973 - B158DRAFT_0904 0.80 +0.3 929,277 + B158DRAFT_0905 0.13 +0.1 929,280 - B158DRAFT_0905 0.14 -1.3 929,293 - B158DRAFT_0905 0.17 -0.3 929,345 - B158DRAFT_0905 0.30 -0.1 929,408 + B158DRAFT_0905 0.46 -0.6 929,408 + B158DRAFT_0905 0.46 -0.9 929,828 - +0.1 929,835 + +0.3 929,843 - +0.9 929,843 - -0.8 929,903 + B158DRAFT_0906 0.20 -0.6 929,908 + B158DRAFT_0906 0.21 -0.4 929,908 + B158DRAFT_0906 0.21 +0.4 929,913 + B158DRAFT_0906 0.22 +0.0 929,913 + B158DRAFT_0906 0.22 +0.2 929,913 + B158DRAFT_0906 0.22 +0.1 929,913 + B158DRAFT_0906 0.22 +3.1 929,913 + B158DRAFT_0906 0.22 -0.0 929,913 + B158DRAFT_0906 0.22 +0.7 929,967 + B158DRAFT_0906 0.33 -0.2 929,967 + B158DRAFT_0906 0.33 -0.5 930,060 + B158DRAFT_0906 0.53 -0.4 930,068 - B158DRAFT_0906 0.55 -0.5 930,079 + B158DRAFT_0906 0.57 -0.2 930,079 + B158DRAFT_0906 0.57 -0.2 930,087 - B158DRAFT_0906 0.59 -0.4 930,101 + B158DRAFT_0906 0.62 -0.2 930,109 - B158DRAFT_0906 0.64 -0.0 930,123 + B158DRAFT_0906 0.67 +0.2 930,134 + B158DRAFT_0906 0.69 +0.4
Or see this region's nucleotide sequence