Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0711

Experiment: m.b. Paraquat dichloride 0.00390625 mg/ml

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_0708 and B158DRAFT_0709 are separated by 159 nucleotidesB158DRAFT_0709 and B158DRAFT_0710 are separated by 32 nucleotidesB158DRAFT_0710 and B158DRAFT_0711 are separated by 27 nucleotidesB158DRAFT_0711 and B158DRAFT_0712 overlap by 1 nucleotides B158DRAFT_0708: B158DRAFT_0708 - Membrane protein implicated in regulation of membrane protease activity, at 709,548 to 710,027 _0708 B158DRAFT_0709: B158DRAFT_0709 - Rhodanese-related sulfurtransferase, at 710,187 to 710,612 _0709 B158DRAFT_0710: B158DRAFT_0710 - Glutaredoxin, GrxC family, at 710,645 to 710,905 _0710 B158DRAFT_0711: B158DRAFT_0711 - protein translocase subunit secB, at 710,933 to 711,439 _0711 B158DRAFT_0712: B158DRAFT_0712 - Glycerol-3-phosphate dehydrogenase, at 711,439 to 712,449 _0712 Position (kb) 710 711 712Strain fitness (log2 ratio) -2 -1 0 1 2at 709.934 kb on + strand, within B158DRAFT_0708at 709.948 kb on + strand, within B158DRAFT_0708at 709.948 kb on + strand, within B158DRAFT_0708at 709.956 kb on - strand, within B158DRAFT_0708at 709.956 kb on - strand, within B158DRAFT_0708at 709.957 kb on - strand, within B158DRAFT_0708at 709.980 kb on - strandat 709.987 kb on - strandat 709.999 kb on + strandat 709.999 kb on + strandat 709.999 kb on + strandat 710.007 kb on - strandat 710.007 kb on - strandat 710.021 kb on + strandat 710.021 kb on + strandat 710.021 kb on + strandat 710.027 kb on + strandat 710.029 kb on - strandat 710.029 kb on - strandat 710.029 kb on - strandat 710.029 kb on - strandat 710.030 kb on - strandat 710.045 kb on + strandat 710.053 kb on - strandat 710.055 kb on + strandat 710.074 kb on - strandat 710.115 kb on + strandat 710.115 kb on + strandat 710.115 kb on + strandat 710.115 kb on + strandat 710.115 kb on + strandat 710.115 kb on + strandat 710.123 kb on - strandat 710.123 kb on - strandat 710.123 kb on - strandat 710.123 kb on - strandat 710.123 kb on - strandat 710.132 kb on + strandat 710.140 kb on - strandat 710.223 kb on + strandat 710.231 kb on - strand, within B158DRAFT_0709at 710.244 kb on + strand, within B158DRAFT_0709at 710.253 kb on - strand, within B158DRAFT_0709at 710.273 kb on + strand, within B158DRAFT_0709at 710.281 kb on - strand, within B158DRAFT_0709at 710.281 kb on - strand, within B158DRAFT_0709at 710.293 kb on + strand, within B158DRAFT_0709at 710.300 kb on + strand, within B158DRAFT_0709at 710.357 kb on - strand, within B158DRAFT_0709at 710.384 kb on - strand, within B158DRAFT_0709at 710.397 kb on - strand, within B158DRAFT_0709at 710.470 kb on + strand, within B158DRAFT_0709at 710.493 kb on + strand, within B158DRAFT_0709at 710.501 kb on - strand, within B158DRAFT_0709at 710.562 kb on + strand, within B158DRAFT_0709at 710.573 kb on + strandat 710.753 kb on + strand, within B158DRAFT_0710at 710.916 kb on + strandat 710.929 kb on + strandat 710.929 kb on + strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.00390625 mg/ml
remove
709,934 + B158DRAFT_0708 0.80 -1.1
709,948 + B158DRAFT_0708 0.83 -0.8
709,948 + B158DRAFT_0708 0.83 -1.4
709,956 - B158DRAFT_0708 0.85 +0.0
709,956 - B158DRAFT_0708 0.85 -0.3
709,957 - B158DRAFT_0708 0.85 -0.6
709,980 - -0.6
709,987 - +0.4
709,999 + +0.7
709,999 + -0.7
709,999 + -0.6
710,007 - -0.3
710,007 - -0.5
710,021 + -0.3
710,021 + -0.4
710,021 + -0.5
710,027 + +0.3
710,029 - -1.3
710,029 - -1.6
710,029 - -0.4
710,029 - +0.2
710,030 - +0.1
710,045 + -0.6
710,053 - -0.4
710,055 + +0.8
710,074 - -0.9
710,115 + +0.2
710,115 + -0.8
710,115 + +0.7
710,115 + +0.1
710,115 + -0.2
710,115 + +0.2
710,123 - -0.2
710,123 - -0.1
710,123 - +0.2
710,123 - -0.2
710,123 - -0.4
710,132 + -0.2
710,140 - +0.9
710,223 + -0.9
710,231 - B158DRAFT_0709 0.10 -0.7
710,244 + B158DRAFT_0709 0.13 -1.3
710,253 - B158DRAFT_0709 0.15 -0.6
710,273 + B158DRAFT_0709 0.20 -1.6
710,281 - B158DRAFT_0709 0.22 -1.7
710,281 - B158DRAFT_0709 0.22 -0.9
710,293 + B158DRAFT_0709 0.25 -1.1
710,300 + B158DRAFT_0709 0.27 +2.4
710,357 - B158DRAFT_0709 0.40 -2.2
710,384 - B158DRAFT_0709 0.46 -1.6
710,397 - B158DRAFT_0709 0.49 -0.9
710,470 + B158DRAFT_0709 0.66 +0.1
710,493 + B158DRAFT_0709 0.72 -1.5
710,501 - B158DRAFT_0709 0.74 +0.6
710,562 + B158DRAFT_0709 0.88 -1.0
710,573 + -0.8
710,753 + B158DRAFT_0710 0.41 +0.8
710,916 + +0.0
710,929 + +0.8
710,929 + +1.4

Or see this region's nucleotide sequence