Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0577

Experiment: m.b. Paraquat dichloride 0.00390625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0576 and B158DRAFT_0577 are separated by 262 nucleotidesB158DRAFT_0577 and B158DRAFT_0578 are separated by 103 nucleotides B158DRAFT_0576: B158DRAFT_0576 - guanylate kinase (EC 2.7.4.8), at 580,865 to 581,518 _0576 B158DRAFT_0577: B158DRAFT_0577 - hypothetical protein, at 581,781 to 582,320 _0577 B158DRAFT_0578: B158DRAFT_0578 - translation factor SUA5, at 582,424 to 583,395 _0578 Position (kb) 581 582 583Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5at 580.833 kb on - strandat 581.553 kb on - strandat 581.569 kb on - strandat 581.576 kb on - strandat 581.655 kb on - strandat 581.706 kb on + strandat 581.711 kb on + strandat 581.714 kb on - strandat 581.714 kb on - strandat 581.714 kb on - strandat 581.719 kb on - strandat 581.804 kb on + strandat 581.804 kb on + strandat 581.804 kb on + strandat 581.812 kb on + strandat 581.812 kb on + strandat 581.812 kb on + strandat 581.820 kb on + strandat 581.826 kb on - strandat 581.901 kb on + strand, within B158DRAFT_0577at 581.931 kb on - strand, within B158DRAFT_0577at 581.949 kb on - strand, within B158DRAFT_0577at 581.949 kb on - strand, within B158DRAFT_0577at 581.951 kb on + strand, within B158DRAFT_0577at 581.951 kb on + strand, within B158DRAFT_0577at 581.958 kb on + strand, within B158DRAFT_0577at 581.958 kb on + strand, within B158DRAFT_0577at 581.959 kb on - strand, within B158DRAFT_0577at 581.959 kb on - strand, within B158DRAFT_0577at 581.966 kb on - strand, within B158DRAFT_0577at 581.966 kb on - strand, within B158DRAFT_0577at 581.987 kb on + strand, within B158DRAFT_0577at 581.992 kb on + strand, within B158DRAFT_0577at 582.000 kb on + strand, within B158DRAFT_0577at 582.097 kb on - strand, within B158DRAFT_0577at 582.180 kb on + strand, within B158DRAFT_0577at 582.180 kb on + strand, within B158DRAFT_0577at 582.180 kb on + strand, within B158DRAFT_0577at 582.180 kb on + strand, within B158DRAFT_0577at 582.180 kb on + strand, within B158DRAFT_0577at 582.180 kb on + strand, within B158DRAFT_0577at 582.180 kb on + strand, within B158DRAFT_0577at 582.180 kb on + strand, within B158DRAFT_0577at 582.180 kb on + strand, within B158DRAFT_0577at 582.180 kb on + strand, within B158DRAFT_0577at 582.180 kb on + strand, within B158DRAFT_0577at 582.180 kb on + strand, within B158DRAFT_0577at 582.180 kb on + strand, within B158DRAFT_0577at 582.185 kb on + strand, within B158DRAFT_0577at 582.188 kb on - strand, within B158DRAFT_0577at 582.188 kb on - strand, within B158DRAFT_0577at 582.188 kb on - strand, within B158DRAFT_0577at 582.188 kb on - strand, within B158DRAFT_0577at 582.188 kb on - strand, within B158DRAFT_0577at 582.188 kb on - strand, within B158DRAFT_0577at 582.188 kb on - strand, within B158DRAFT_0577at 582.190 kb on + strand, within B158DRAFT_0577at 582.190 kb on + strand, within B158DRAFT_0577at 582.190 kb on + strand, within B158DRAFT_0577at 582.190 kb on + strand, within B158DRAFT_0577at 582.190 kb on + strand, within B158DRAFT_0577at 582.190 kb on + strand, within B158DRAFT_0577at 582.190 kb on + strand, within B158DRAFT_0577at 582.190 kb on + strand, within B158DRAFT_0577at 582.190 kb on + strand, within B158DRAFT_0577at 582.190 kb on + strand, within B158DRAFT_0577at 582.190 kb on + strand, within B158DRAFT_0577at 582.190 kb on + strand, within B158DRAFT_0577at 582.190 kb on + strand, within B158DRAFT_0577at 582.190 kb on + strand, within B158DRAFT_0577at 582.190 kb on + strand, within B158DRAFT_0577at 582.190 kb on + strand, within B158DRAFT_0577at 582.190 kb on + strand, within B158DRAFT_0577at 582.193 kb on - strand, within B158DRAFT_0577at 582.198 kb on + strand, within B158DRAFT_0577at 582.198 kb on - strand, within B158DRAFT_0577at 582.198 kb on - strand, within B158DRAFT_0577at 582.198 kb on - strand, within B158DRAFT_0577at 582.198 kb on - strand, within B158DRAFT_0577at 582.198 kb on - strand, within B158DRAFT_0577at 582.198 kb on - strand, within B158DRAFT_0577at 582.198 kb on - strand, within B158DRAFT_0577at 582.198 kb on - strand, within B158DRAFT_0577at 582.198 kb on - strand, within B158DRAFT_0577at 582.198 kb on - strand, within B158DRAFT_0577at 582.206 kb on - strand, within B158DRAFT_0577at 582.206 kb on - strand, within B158DRAFT_0577at 582.244 kb on + strand, within B158DRAFT_0577at 582.252 kb on - strand, within B158DRAFT_0577at 582.252 kb on - strand, within B158DRAFT_0577at 582.377 kb on - strandat 582.415 kb on + strandat 582.427 kb on + strandat 582.427 kb on + strandat 582.427 kb on + strandat 582.427 kb on + strandat 582.427 kb on + strandat 582.427 kb on + strandat 582.427 kb on + strandat 582.427 kb on + strandat 582.427 kb on + strandat 582.427 kb on + strandat 582.427 kb on + strandat 582.427 kb on + strandat 582.427 kb on + strandat 582.427 kb on + strandat 582.427 kb on + strandat 582.427 kb on + strandat 582.427 kb on + strandat 582.427 kb on + strandat 582.427 kb on + strandat 582.435 kb on - strandat 582.435 kb on - strandat 582.435 kb on - strandat 582.435 kb on - strandat 582.435 kb on - strandat 582.435 kb on - strandat 582.435 kb on - strandat 582.435 kb on - strandat 582.435 kb on - strandat 582.435 kb on - strandat 582.435 kb on - strandat 582.435 kb on - strandat 582.435 kb on - strandat 582.435 kb on - strandat 582.435 kb on - strandat 582.435 kb on - strandat 582.442 kb on + strandat 582.450 kb on - strandat 582.450 kb on - strandat 582.450 kb on - strandat 582.511 kb on + strandat 582.532 kb on - strand, within B158DRAFT_0578at 582.544 kb on - strand, within B158DRAFT_0578at 582.569 kb on + strand, within B158DRAFT_0578at 582.583 kb on + strand, within B158DRAFT_0578at 582.619 kb on + strand, within B158DRAFT_0578at 582.646 kb on - strand, within B158DRAFT_0578at 582.761 kb on - strand, within B158DRAFT_0578at 582.783 kb on - strand, within B158DRAFT_0578at 582.784 kb on - strand, within B158DRAFT_0578at 582.784 kb on - strand, within B158DRAFT_0578at 582.810 kb on + strand, within B158DRAFT_0578at 582.835 kb on + strand, within B158DRAFT_0578at 582.835 kb on + strand, within B158DRAFT_0578at 582.856 kb on + strand, within B158DRAFT_0578at 582.856 kb on + strand, within B158DRAFT_0578at 582.861 kb on + strand, within B158DRAFT_0578at 582.861 kb on + strand, within B158DRAFT_0578at 582.864 kb on - strand, within B158DRAFT_0578at 582.864 kb on - strand, within B158DRAFT_0578at 582.864 kb on - strand, within B158DRAFT_0578at 582.864 kb on - strand, within B158DRAFT_0578at 582.864 kb on - strand, within B158DRAFT_0578at 582.869 kb on - strand, within B158DRAFT_0578at 582.869 kb on - strand, within B158DRAFT_0578at 582.889 kb on + strand, within B158DRAFT_0578at 582.922 kb on + strand, within B158DRAFT_0578at 582.923 kb on + strand, within B158DRAFT_0578at 582.930 kb on - strand, within B158DRAFT_0578at 582.931 kb on - strand, within B158DRAFT_0578at 582.931 kb on - strand, within B158DRAFT_0578at 582.936 kb on - strand, within B158DRAFT_0578at 582.941 kb on - strand, within B158DRAFT_0578at 582.941 kb on - strand, within B158DRAFT_0578at 582.946 kb on - strand, within B158DRAFT_0578at 582.965 kb on + strand, within B158DRAFT_0578at 582.973 kb on - strand, within B158DRAFT_0578at 582.983 kb on + strand, within B158DRAFT_0578at 583.052 kb on - strand, within B158DRAFT_0578at 583.067 kb on - strand, within B158DRAFT_0578at 583.080 kb on - strand, within B158DRAFT_0578at 583.083 kb on + strand, within B158DRAFT_0578at 583.083 kb on + strand, within B158DRAFT_0578at 583.083 kb on + strand, within B158DRAFT_0578at 583.108 kb on + strand, within B158DRAFT_0578at 583.121 kb on + strand, within B158DRAFT_0578at 583.121 kb on + strand, within B158DRAFT_0578at 583.124 kb on - strand, within B158DRAFT_0578at 583.240 kb on - strand, within B158DRAFT_0578at 583.273 kb on - strand, within B158DRAFT_0578at 583.304 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.00390625 mg/ml
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580,833 - -0.8
581,553 - -0.6
581,569 - -0.6
581,576 - +5.2
581,655 - +0.3
581,706 + -0.4
581,711 + -1.6
581,714 - +0.1
581,714 - -0.1
581,714 - +1.5
581,719 - +0.1
581,804 + +0.0
581,804 + +1.1
581,804 + -0.2
581,812 + +0.8
581,812 + -0.9
581,812 + -0.3
581,820 + +0.3
581,826 - +0.1
581,901 + B158DRAFT_0577 0.22 -0.1
581,931 - B158DRAFT_0577 0.28 -0.4
581,949 - B158DRAFT_0577 0.31 +0.2
581,949 - B158DRAFT_0577 0.31 -0.3
581,951 + B158DRAFT_0577 0.31 -0.4
581,951 + B158DRAFT_0577 0.31 +0.6
581,958 + B158DRAFT_0577 0.33 -0.2
581,958 + B158DRAFT_0577 0.33 +0.8
581,959 - B158DRAFT_0577 0.33 -0.3
581,959 - B158DRAFT_0577 0.33 -0.5
581,966 - B158DRAFT_0577 0.34 -1.2
581,966 - B158DRAFT_0577 0.34 -1.7
581,987 + B158DRAFT_0577 0.38 -0.4
581,992 + B158DRAFT_0577 0.39 +0.4
582,000 + B158DRAFT_0577 0.41 -1.7
582,097 - B158DRAFT_0577 0.59 -0.2
582,180 + B158DRAFT_0577 0.74 -0.3
582,180 + B158DRAFT_0577 0.74 +0.6
582,180 + B158DRAFT_0577 0.74 +0.6
582,180 + B158DRAFT_0577 0.74 +0.1
582,180 + B158DRAFT_0577 0.74 -0.2
582,180 + B158DRAFT_0577 0.74 +0.3
582,180 + B158DRAFT_0577 0.74 -0.0
582,180 + B158DRAFT_0577 0.74 -0.4
582,180 + B158DRAFT_0577 0.74 -1.0
582,180 + B158DRAFT_0577 0.74 -0.7
582,180 + B158DRAFT_0577 0.74 -0.2
582,180 + B158DRAFT_0577 0.74 +0.0
582,180 + B158DRAFT_0577 0.74 -0.2
582,185 + B158DRAFT_0577 0.75 +0.2
582,188 - B158DRAFT_0577 0.75 -0.7
582,188 - B158DRAFT_0577 0.75 +0.3
582,188 - B158DRAFT_0577 0.75 +0.1
582,188 - B158DRAFT_0577 0.75 -0.2
582,188 - B158DRAFT_0577 0.75 -0.2
582,188 - B158DRAFT_0577 0.75 +0.6
582,188 - B158DRAFT_0577 0.75 -0.3
582,190 + B158DRAFT_0577 0.76 -1.6
582,190 + B158DRAFT_0577 0.76 -0.9
582,190 + B158DRAFT_0577 0.76 -0.1
582,190 + B158DRAFT_0577 0.76 -0.8
582,190 + B158DRAFT_0577 0.76 +0.1
582,190 + B158DRAFT_0577 0.76 +0.1
582,190 + B158DRAFT_0577 0.76 -0.5
582,190 + B158DRAFT_0577 0.76 -2.3
582,190 + B158DRAFT_0577 0.76 +0.7
582,190 + B158DRAFT_0577 0.76 -2.0
582,190 + B158DRAFT_0577 0.76 -0.2
582,190 + B158DRAFT_0577 0.76 -0.2
582,190 + B158DRAFT_0577 0.76 -1.1
582,190 + B158DRAFT_0577 0.76 -0.2
582,190 + B158DRAFT_0577 0.76 -0.9
582,190 + B158DRAFT_0577 0.76 -0.3
582,190 + B158DRAFT_0577 0.76 -0.1
582,193 - B158DRAFT_0577 0.76 +1.4
582,198 + B158DRAFT_0577 0.77 +0.2
582,198 - B158DRAFT_0577 0.77 -0.3
582,198 - B158DRAFT_0577 0.77 -0.7
582,198 - B158DRAFT_0577 0.77 -0.4
582,198 - B158DRAFT_0577 0.77 -0.9
582,198 - B158DRAFT_0577 0.77 -0.1
582,198 - B158DRAFT_0577 0.77 -0.4
582,198 - B158DRAFT_0577 0.77 -0.3
582,198 - B158DRAFT_0577 0.77 -0.4
582,198 - B158DRAFT_0577 0.77 +0.3
582,198 - B158DRAFT_0577 0.77 -0.5
582,206 - B158DRAFT_0577 0.79 +0.3
582,206 - B158DRAFT_0577 0.79 -0.6
582,244 + B158DRAFT_0577 0.86 -0.3
582,252 - B158DRAFT_0577 0.87 -0.3
582,252 - B158DRAFT_0577 0.87 -0.3
582,377 - -1.1
582,415 + +1.0
582,427 + -1.8
582,427 + -0.8
582,427 + -0.1
582,427 + -0.2
582,427 + -0.4
582,427 + -0.8
582,427 + +0.7
582,427 + +0.2
582,427 + +0.3
582,427 + -0.6
582,427 + -0.6
582,427 + -1.0
582,427 + +0.0
582,427 + +2.1
582,427 + +0.6
582,427 + +2.8
582,427 + -1.0
582,427 + -0.1
582,427 + -1.3
582,435 - +0.2
582,435 - +0.1
582,435 - +1.8
582,435 - +0.9
582,435 - +0.3
582,435 - +0.5
582,435 - -0.4
582,435 - +0.7
582,435 - -0.5
582,435 - -0.9
582,435 - -0.3
582,435 - +0.3
582,435 - -0.9
582,435 - -0.4
582,435 - -0.6
582,435 - -0.9
582,442 + +1.1
582,450 - -0.3
582,450 - +0.5
582,450 - -1.1
582,511 + -0.5
582,532 - B158DRAFT_0578 0.11 +0.3
582,544 - B158DRAFT_0578 0.12 -0.5
582,569 + B158DRAFT_0578 0.15 -2.0
582,583 + B158DRAFT_0578 0.16 -0.1
582,619 + B158DRAFT_0578 0.20 -0.2
582,646 - B158DRAFT_0578 0.23 -0.4
582,761 - B158DRAFT_0578 0.35 -0.2
582,783 - B158DRAFT_0578 0.37 -0.6
582,784 - B158DRAFT_0578 0.37 -0.5
582,784 - B158DRAFT_0578 0.37 -1.2
582,810 + B158DRAFT_0578 0.40 -1.4
582,835 + B158DRAFT_0578 0.42 +0.0
582,835 + B158DRAFT_0578 0.42 -1.7
582,856 + B158DRAFT_0578 0.44 -0.5
582,856 + B158DRAFT_0578 0.44 -0.0
582,861 + B158DRAFT_0578 0.45 +0.5
582,861 + B158DRAFT_0578 0.45 -0.0
582,864 - B158DRAFT_0578 0.45 +0.7
582,864 - B158DRAFT_0578 0.45 -0.6
582,864 - B158DRAFT_0578 0.45 -0.1
582,864 - B158DRAFT_0578 0.45 -0.1
582,864 - B158DRAFT_0578 0.45 +0.4
582,869 - B158DRAFT_0578 0.46 -1.3
582,869 - B158DRAFT_0578 0.46 -0.7
582,889 + B158DRAFT_0578 0.48 -0.4
582,922 + B158DRAFT_0578 0.51 +1.1
582,923 + B158DRAFT_0578 0.51 -0.8
582,930 - B158DRAFT_0578 0.52 -0.8
582,931 - B158DRAFT_0578 0.52 -1.0
582,931 - B158DRAFT_0578 0.52 -0.2
582,936 - B158DRAFT_0578 0.53 -0.1
582,941 - B158DRAFT_0578 0.53 +0.1
582,941 - B158DRAFT_0578 0.53 -0.3
582,946 - B158DRAFT_0578 0.54 -0.8
582,965 + B158DRAFT_0578 0.56 +0.0
582,973 - B158DRAFT_0578 0.56 -1.5
582,983 + B158DRAFT_0578 0.58 -0.2
583,052 - B158DRAFT_0578 0.65 +0.1
583,067 - B158DRAFT_0578 0.66 -1.7
583,080 - B158DRAFT_0578 0.67 -1.0
583,083 + B158DRAFT_0578 0.68 +0.1
583,083 + B158DRAFT_0578 0.68 +2.9
583,083 + B158DRAFT_0578 0.68 -0.5
583,108 + B158DRAFT_0578 0.70 -0.3
583,121 + B158DRAFT_0578 0.72 +0.4
583,121 + B158DRAFT_0578 0.72 -1.2
583,124 - B158DRAFT_0578 0.72 -0.1
583,240 - B158DRAFT_0578 0.84 +0.2
583,273 - B158DRAFT_0578 0.87 +0.8
583,304 - +0.3

Or see this region's nucleotide sequence