Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0491

Experiment: m.b. Paraquat dichloride 0.00390625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0490 and B158DRAFT_0491 are separated by 101 nucleotidesB158DRAFT_0491 and B158DRAFT_0492 are separated by 19 nucleotides B158DRAFT_0490: B158DRAFT_0490 - rarD protein, at 489,344 to 490,264 _0490 B158DRAFT_0491: B158DRAFT_0491 - Di- and tricarboxylate transporters, at 490,366 to 492,141 _0491 B158DRAFT_0492: B158DRAFT_0492 - Eukaryotic aspartyl protease., at 492,161 to 493,417 _0492 Position (kb) 490 491 492 493Strain fitness (log2 ratio) -2 -1 0 1 2 3at 489.373 kb on - strandat 489.378 kb on - strandat 489.410 kb on + strandat 489.418 kb on + strandat 489.436 kb on - strand, within B158DRAFT_0490at 489.469 kb on + strand, within B158DRAFT_0490at 489.469 kb on + strand, within B158DRAFT_0490at 489.469 kb on + strand, within B158DRAFT_0490at 489.474 kb on + strand, within B158DRAFT_0490at 489.474 kb on + strand, within B158DRAFT_0490at 489.474 kb on + strand, within B158DRAFT_0490at 489.474 kb on + strand, within B158DRAFT_0490at 489.477 kb on - strand, within B158DRAFT_0490at 489.477 kb on - strand, within B158DRAFT_0490at 489.482 kb on - strand, within B158DRAFT_0490at 489.482 kb on - strand, within B158DRAFT_0490at 489.635 kb on + strand, within B158DRAFT_0490at 489.665 kb on + strand, within B158DRAFT_0490at 489.673 kb on - strand, within B158DRAFT_0490at 489.680 kb on + strand, within B158DRAFT_0490at 489.792 kb on + strand, within B158DRAFT_0490at 489.792 kb on + strand, within B158DRAFT_0490at 489.792 kb on + strand, within B158DRAFT_0490at 489.800 kb on - strand, within B158DRAFT_0490at 489.824 kb on + strand, within B158DRAFT_0490at 489.832 kb on - strand, within B158DRAFT_0490at 489.832 kb on - strand, within B158DRAFT_0490at 489.832 kb on - strand, within B158DRAFT_0490at 489.847 kb on + strand, within B158DRAFT_0490at 489.847 kb on + strand, within B158DRAFT_0490at 489.847 kb on + strand, within B158DRAFT_0490at 489.847 kb on + strand, within B158DRAFT_0490at 489.847 kb on + strand, within B158DRAFT_0490at 489.855 kb on - strand, within B158DRAFT_0490at 489.855 kb on - strand, within B158DRAFT_0490at 489.855 kb on - strand, within B158DRAFT_0490at 489.855 kb on - strand, within B158DRAFT_0490at 489.855 kb on - strand, within B158DRAFT_0490at 489.911 kb on + strand, within B158DRAFT_0490at 489.919 kb on - strand, within B158DRAFT_0490at 489.924 kb on + strand, within B158DRAFT_0490at 489.958 kb on - strand, within B158DRAFT_0490at 489.958 kb on - strand, within B158DRAFT_0490at 490.024 kb on - strand, within B158DRAFT_0490at 490.032 kb on - strand, within B158DRAFT_0490at 490.065 kb on + strand, within B158DRAFT_0490at 490.065 kb on + strand, within B158DRAFT_0490at 490.075 kb on + strand, within B158DRAFT_0490at 490.088 kb on + strand, within B158DRAFT_0490at 490.096 kb on - strand, within B158DRAFT_0490at 490.152 kb on + strand, within B158DRAFT_0490at 490.152 kb on + strand, within B158DRAFT_0490at 490.152 kb on + strand, within B158DRAFT_0490at 490.152 kb on - strand, within B158DRAFT_0490at 490.160 kb on - strand, within B158DRAFT_0490at 490.160 kb on - strand, within B158DRAFT_0490at 490.160 kb on - strand, within B158DRAFT_0490at 490.162 kb on + strand, within B158DRAFT_0490at 490.162 kb on + strand, within B158DRAFT_0490at 490.165 kb on - strand, within B158DRAFT_0490at 490.165 kb on - strand, within B158DRAFT_0490at 490.167 kb on + strand, within B158DRAFT_0490at 490.167 kb on + strand, within B158DRAFT_0490at 490.170 kb on - strand, within B158DRAFT_0490at 490.170 kb on - strand, within B158DRAFT_0490at 490.170 kb on - strand, within B158DRAFT_0490at 490.172 kb on + strand, within B158DRAFT_0490at 490.172 kb on + strand, within B158DRAFT_0490at 490.172 kb on + strand, within B158DRAFT_0490at 490.175 kb on - strandat 490.180 kb on - strandat 490.265 kb on + strandat 490.305 kb on + strandat 490.370 kb on - strandat 490.447 kb on + strandat 490.554 kb on - strand, within B158DRAFT_0491at 490.631 kb on - strand, within B158DRAFT_0491at 490.729 kb on - strand, within B158DRAFT_0491at 490.763 kb on + strand, within B158DRAFT_0491at 490.763 kb on + strand, within B158DRAFT_0491at 490.763 kb on + strand, within B158DRAFT_0491at 490.771 kb on - strand, within B158DRAFT_0491at 490.781 kb on - strand, within B158DRAFT_0491at 490.781 kb on - strand, within B158DRAFT_0491at 490.788 kb on - strand, within B158DRAFT_0491at 490.788 kb on - strand, within B158DRAFT_0491at 490.788 kb on - strand, within B158DRAFT_0491at 490.811 kb on + strand, within B158DRAFT_0491at 490.811 kb on + strand, within B158DRAFT_0491at 490.811 kb on + strand, within B158DRAFT_0491at 490.811 kb on + strand, within B158DRAFT_0491at 490.811 kb on + strand, within B158DRAFT_0491at 490.811 kb on + strand, within B158DRAFT_0491at 490.811 kb on + strand, within B158DRAFT_0491at 490.811 kb on + strand, within B158DRAFT_0491at 490.811 kb on + strand, within B158DRAFT_0491at 490.819 kb on - strand, within B158DRAFT_0491at 490.819 kb on - strand, within B158DRAFT_0491at 490.819 kb on - strand, within B158DRAFT_0491at 490.819 kb on - strand, within B158DRAFT_0491at 490.819 kb on - strand, within B158DRAFT_0491at 490.819 kb on - strand, within B158DRAFT_0491at 490.829 kb on - strand, within B158DRAFT_0491at 490.850 kb on + strand, within B158DRAFT_0491at 490.850 kb on + strand, within B158DRAFT_0491at 490.850 kb on + strand, within B158DRAFT_0491at 490.922 kb on - strand, within B158DRAFT_0491at 490.922 kb on - strand, within B158DRAFT_0491at 491.041 kb on - strand, within B158DRAFT_0491at 491.079 kb on + strand, within B158DRAFT_0491at 491.095 kb on + strand, within B158DRAFT_0491at 491.147 kb on + strand, within B158DRAFT_0491at 491.147 kb on + strand, within B158DRAFT_0491at 491.155 kb on - strand, within B158DRAFT_0491at 491.155 kb on - strand, within B158DRAFT_0491at 491.171 kb on - strand, within B158DRAFT_0491at 491.236 kb on + strand, within B158DRAFT_0491at 491.244 kb on - strand, within B158DRAFT_0491at 491.264 kb on + strand, within B158DRAFT_0491at 491.331 kb on + strand, within B158DRAFT_0491at 491.350 kb on + strand, within B158DRAFT_0491at 491.350 kb on + strand, within B158DRAFT_0491at 491.358 kb on - strand, within B158DRAFT_0491at 491.463 kb on - strand, within B158DRAFT_0491at 491.530 kb on + strand, within B158DRAFT_0491at 491.535 kb on + strand, within B158DRAFT_0491at 491.538 kb on - strand, within B158DRAFT_0491at 491.576 kb on + strand, within B158DRAFT_0491at 491.629 kb on + strand, within B158DRAFT_0491at 491.672 kb on + strand, within B158DRAFT_0491at 491.672 kb on + strand, within B158DRAFT_0491at 491.672 kb on + strand, within B158DRAFT_0491at 491.672 kb on + strand, within B158DRAFT_0491at 491.680 kb on - strand, within B158DRAFT_0491at 491.716 kb on - strand, within B158DRAFT_0491at 491.716 kb on - strand, within B158DRAFT_0491at 491.753 kb on - strand, within B158DRAFT_0491at 491.965 kb on + strandat 492.023 kb on - strandat 492.035 kb on - strandat 492.051 kb on + strandat 492.346 kb on + strand, within B158DRAFT_0492at 492.419 kb on + strand, within B158DRAFT_0492at 492.419 kb on + strand, within B158DRAFT_0492at 492.419 kb on + strand, within B158DRAFT_0492at 492.422 kb on - strand, within B158DRAFT_0492at 492.427 kb on - strand, within B158DRAFT_0492at 492.448 kb on - strand, within B158DRAFT_0492at 492.496 kb on + strand, within B158DRAFT_0492at 492.496 kb on + strand, within B158DRAFT_0492at 492.496 kb on + strand, within B158DRAFT_0492at 492.542 kb on - strand, within B158DRAFT_0492at 492.571 kb on + strand, within B158DRAFT_0492at 492.591 kb on + strand, within B158DRAFT_0492at 492.683 kb on + strand, within B158DRAFT_0492at 492.691 kb on - strand, within B158DRAFT_0492at 492.691 kb on - strand, within B158DRAFT_0492at 492.691 kb on - strand, within B158DRAFT_0492at 492.691 kb on - strand, within B158DRAFT_0492at 492.798 kb on + strand, within B158DRAFT_0492at 492.798 kb on - strand, within B158DRAFT_0492at 492.981 kb on + strand, within B158DRAFT_0492at 492.989 kb on - strand, within B158DRAFT_0492at 492.989 kb on - strand, within B158DRAFT_0492at 492.989 kb on - strand, within B158DRAFT_0492at 493.030 kb on + strand, within B158DRAFT_0492at 493.065 kb on - strand, within B158DRAFT_0492at 493.081 kb on - strand, within B158DRAFT_0492at 493.107 kb on + strand, within B158DRAFT_0492at 493.115 kb on - strand, within B158DRAFT_0492at 493.115 kb on - strand, within B158DRAFT_0492at 493.115 kb on - strand, within B158DRAFT_0492at 493.131 kb on + strand, within B158DRAFT_0492at 493.131 kb on + strand, within B158DRAFT_0492at 493.131 kb on + strand, within B158DRAFT_0492at 493.131 kb on + strand, within B158DRAFT_0492at 493.139 kb on - strand, within B158DRAFT_0492

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.00390625 mg/ml
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489,373 - -0.6
489,378 - -0.4
489,410 + +0.5
489,418 + -1.2
489,436 - B158DRAFT_0490 0.10 -0.4
489,469 + B158DRAFT_0490 0.14 +0.1
489,469 + B158DRAFT_0490 0.14 -0.1
489,469 + B158DRAFT_0490 0.14 -0.2
489,474 + B158DRAFT_0490 0.14 -0.8
489,474 + B158DRAFT_0490 0.14 +0.6
489,474 + B158DRAFT_0490 0.14 -0.0
489,474 + B158DRAFT_0490 0.14 +0.6
489,477 - B158DRAFT_0490 0.14 -1.8
489,477 - B158DRAFT_0490 0.14 +0.9
489,482 - B158DRAFT_0490 0.15 -0.5
489,482 - B158DRAFT_0490 0.15 +0.3
489,635 + B158DRAFT_0490 0.32 -0.3
489,665 + B158DRAFT_0490 0.35 -0.3
489,673 - B158DRAFT_0490 0.36 +0.2
489,680 + B158DRAFT_0490 0.36 -0.6
489,792 + B158DRAFT_0490 0.49 -0.8
489,792 + B158DRAFT_0490 0.49 +0.1
489,792 + B158DRAFT_0490 0.49 -0.9
489,800 - B158DRAFT_0490 0.50 +1.0
489,824 + B158DRAFT_0490 0.52 +0.4
489,832 - B158DRAFT_0490 0.53 -0.1
489,832 - B158DRAFT_0490 0.53 -0.3
489,832 - B158DRAFT_0490 0.53 -0.3
489,847 + B158DRAFT_0490 0.55 -0.7
489,847 + B158DRAFT_0490 0.55 -0.0
489,847 + B158DRAFT_0490 0.55 -0.1
489,847 + B158DRAFT_0490 0.55 -2.0
489,847 + B158DRAFT_0490 0.55 -0.5
489,855 - B158DRAFT_0490 0.55 +0.2
489,855 - B158DRAFT_0490 0.55 -0.7
489,855 - B158DRAFT_0490 0.55 -0.7
489,855 - B158DRAFT_0490 0.55 +0.0
489,855 - B158DRAFT_0490 0.55 -0.7
489,911 + B158DRAFT_0490 0.62 -0.1
489,919 - B158DRAFT_0490 0.62 -0.7
489,924 + B158DRAFT_0490 0.63 +0.1
489,958 - B158DRAFT_0490 0.67 -0.8
489,958 - B158DRAFT_0490 0.67 -0.7
490,024 - B158DRAFT_0490 0.74 +0.1
490,032 - B158DRAFT_0490 0.75 -2.5
490,065 + B158DRAFT_0490 0.78 +1.8
490,065 + B158DRAFT_0490 0.78 +0.2
490,075 + B158DRAFT_0490 0.79 -0.2
490,088 + B158DRAFT_0490 0.81 -0.4
490,096 - B158DRAFT_0490 0.82 -0.9
490,152 + B158DRAFT_0490 0.88 -0.2
490,152 + B158DRAFT_0490 0.88 +1.3
490,152 + B158DRAFT_0490 0.88 +0.2
490,152 - B158DRAFT_0490 0.88 -0.2
490,160 - B158DRAFT_0490 0.89 -1.1
490,160 - B158DRAFT_0490 0.89 -0.3
490,160 - B158DRAFT_0490 0.89 +0.8
490,162 + B158DRAFT_0490 0.89 -0.4
490,162 + B158DRAFT_0490 0.89 -1.5
490,165 - B158DRAFT_0490 0.89 -0.5
490,165 - B158DRAFT_0490 0.89 -1.4
490,167 + B158DRAFT_0490 0.89 -0.1
490,167 + B158DRAFT_0490 0.89 +0.8
490,170 - B158DRAFT_0490 0.90 -0.1
490,170 - B158DRAFT_0490 0.90 +0.1
490,170 - B158DRAFT_0490 0.90 -1.2
490,172 + B158DRAFT_0490 0.90 -0.1
490,172 + B158DRAFT_0490 0.90 +0.6
490,172 + B158DRAFT_0490 0.90 +0.2
490,175 - -0.6
490,180 - -0.3
490,265 + +0.4
490,305 + -0.7
490,370 - -1.0
490,447 + -1.2
490,554 - B158DRAFT_0491 0.11 -0.7
490,631 - B158DRAFT_0491 0.15 +1.0
490,729 - B158DRAFT_0491 0.20 -0.6
490,763 + B158DRAFT_0491 0.22 -0.7
490,763 + B158DRAFT_0491 0.22 -0.0
490,763 + B158DRAFT_0491 0.22 -1.7
490,771 - B158DRAFT_0491 0.23 -0.1
490,781 - B158DRAFT_0491 0.23 +0.4
490,781 - B158DRAFT_0491 0.23 -0.4
490,788 - B158DRAFT_0491 0.24 -1.6
490,788 - B158DRAFT_0491 0.24 -0.1
490,788 - B158DRAFT_0491 0.24 +1.0
490,811 + B158DRAFT_0491 0.25 -0.1
490,811 + B158DRAFT_0491 0.25 -0.5
490,811 + B158DRAFT_0491 0.25 -0.1
490,811 + B158DRAFT_0491 0.25 -0.3
490,811 + B158DRAFT_0491 0.25 -1.2
490,811 + B158DRAFT_0491 0.25 +0.4
490,811 + B158DRAFT_0491 0.25 -0.3
490,811 + B158DRAFT_0491 0.25 -0.5
490,811 + B158DRAFT_0491 0.25 -1.3
490,819 - B158DRAFT_0491 0.26 +0.1
490,819 - B158DRAFT_0491 0.26 +0.6
490,819 - B158DRAFT_0491 0.26 -0.3
490,819 - B158DRAFT_0491 0.26 +0.1
490,819 - B158DRAFT_0491 0.26 -0.1
490,819 - B158DRAFT_0491 0.26 -1.4
490,829 - B158DRAFT_0491 0.26 +0.1
490,850 + B158DRAFT_0491 0.27 +0.8
490,850 + B158DRAFT_0491 0.27 -0.8
490,850 + B158DRAFT_0491 0.27 -0.3
490,922 - B158DRAFT_0491 0.31 -0.4
490,922 - B158DRAFT_0491 0.31 +3.7
491,041 - B158DRAFT_0491 0.38 -0.4
491,079 + B158DRAFT_0491 0.40 -0.0
491,095 + B158DRAFT_0491 0.41 -0.8
491,147 + B158DRAFT_0491 0.44 +0.1
491,147 + B158DRAFT_0491 0.44 -0.0
491,155 - B158DRAFT_0491 0.44 -0.7
491,155 - B158DRAFT_0491 0.44 -0.3
491,171 - B158DRAFT_0491 0.45 -1.3
491,236 + B158DRAFT_0491 0.49 -0.2
491,244 - B158DRAFT_0491 0.49 -0.6
491,264 + B158DRAFT_0491 0.51 -0.6
491,331 + B158DRAFT_0491 0.54 +1.6
491,350 + B158DRAFT_0491 0.55 -0.3
491,350 + B158DRAFT_0491 0.55 -1.3
491,358 - B158DRAFT_0491 0.56 -0.9
491,463 - B158DRAFT_0491 0.62 +0.7
491,530 + B158DRAFT_0491 0.66 -0.8
491,535 + B158DRAFT_0491 0.66 +0.3
491,538 - B158DRAFT_0491 0.66 +0.9
491,576 + B158DRAFT_0491 0.68 -0.0
491,629 + B158DRAFT_0491 0.71 +0.1
491,672 + B158DRAFT_0491 0.74 +1.1
491,672 + B158DRAFT_0491 0.74 +1.1
491,672 + B158DRAFT_0491 0.74 -0.4
491,672 + B158DRAFT_0491 0.74 -1.3
491,680 - B158DRAFT_0491 0.74 +1.4
491,716 - B158DRAFT_0491 0.76 -0.1
491,716 - B158DRAFT_0491 0.76 +0.3
491,753 - B158DRAFT_0491 0.78 +0.6
491,965 + -0.1
492,023 - +1.6
492,035 - -0.8
492,051 + +0.8
492,346 + B158DRAFT_0492 0.15 +0.1
492,419 + B158DRAFT_0492 0.21 +0.4
492,419 + B158DRAFT_0492 0.21 -0.2
492,419 + B158DRAFT_0492 0.21 -0.6
492,422 - B158DRAFT_0492 0.21 +0.6
492,427 - B158DRAFT_0492 0.21 -0.5
492,448 - B158DRAFT_0492 0.23 -0.8
492,496 + B158DRAFT_0492 0.27 +0.1
492,496 + B158DRAFT_0492 0.27 -1.0
492,496 + B158DRAFT_0492 0.27 -0.0
492,542 - B158DRAFT_0492 0.30 -1.1
492,571 + B158DRAFT_0492 0.33 +3.4
492,591 + B158DRAFT_0492 0.34 -0.3
492,683 + B158DRAFT_0492 0.42 +0.5
492,691 - B158DRAFT_0492 0.42 +0.3
492,691 - B158DRAFT_0492 0.42 +0.4
492,691 - B158DRAFT_0492 0.42 -1.3
492,691 - B158DRAFT_0492 0.42 -2.0
492,798 + B158DRAFT_0492 0.51 -1.2
492,798 - B158DRAFT_0492 0.51 +0.2
492,981 + B158DRAFT_0492 0.65 -1.2
492,989 - B158DRAFT_0492 0.66 -0.8
492,989 - B158DRAFT_0492 0.66 -0.2
492,989 - B158DRAFT_0492 0.66 +0.5
493,030 + B158DRAFT_0492 0.69 +1.1
493,065 - B158DRAFT_0492 0.72 -0.4
493,081 - B158DRAFT_0492 0.73 +0.2
493,107 + B158DRAFT_0492 0.75 -0.7
493,115 - B158DRAFT_0492 0.76 -0.3
493,115 - B158DRAFT_0492 0.76 +0.7
493,115 - B158DRAFT_0492 0.76 -0.7
493,131 + B158DRAFT_0492 0.77 -0.8
493,131 + B158DRAFT_0492 0.77 +3.0
493,131 + B158DRAFT_0492 0.77 -1.4
493,131 + B158DRAFT_0492 0.77 +0.9
493,139 - B158DRAFT_0492 0.78 +3.2

Or see this region's nucleotide sequence