Experiment: m.b. Paraquat dichloride 0.00390625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0486 and B158DRAFT_0487 are separated by 37 nucleotides B158DRAFT_0487 and B158DRAFT_0488 are separated by 74 nucleotides B158DRAFT_0488 and B158DRAFT_0489 are separated by 60 nucleotides B158DRAFT_0489 and B158DRAFT_0490 are separated by 36 nucleotides
B158DRAFT_0486: B158DRAFT_0486 - iron-sulfur cluster binding protein, putative, at 486,608 to 487,756
_0486
B158DRAFT_0487: B158DRAFT_0487 - Cytochrome c5, at 487,794 to 488,108
_0487
B158DRAFT_0488: B158DRAFT_0488 - Cytochrome c5, at 488,183 to 488,623
_0488
B158DRAFT_0489: B158DRAFT_0489 - uncharacterized domain 1, at 488,684 to 489,307
_0489
B158DRAFT_0490: B158DRAFT_0490 - rarD protein, at 489,344 to 490,264
_0490
Position (kb) 488
489
490 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4
5 at 487.769 kb on + strand at 487.818 kb on + strand at 487.818 kb on + strand at 487.818 kb on + strand at 487.820 kb on - strand at 487.826 kb on - strand, within B158DRAFT_0487 at 487.864 kb on + strand, within B158DRAFT_0487 at 487.864 kb on + strand, within B158DRAFT_0487 at 487.864 kb on + strand, within B158DRAFT_0487 at 487.872 kb on - strand, within B158DRAFT_0487 at 487.872 kb on - strand, within B158DRAFT_0487 at 487.872 kb on - strand, within B158DRAFT_0487 at 487.887 kb on - strand, within B158DRAFT_0487 at 487.929 kb on - strand, within B158DRAFT_0487 at 487.954 kb on - strand, within B158DRAFT_0487 at 487.970 kb on - strand, within B158DRAFT_0487 at 487.970 kb on - strand, within B158DRAFT_0487 at 488.032 kb on - strand, within B158DRAFT_0487 at 488.042 kb on + strand, within B158DRAFT_0487 at 488.042 kb on + strand, within B158DRAFT_0487 at 488.050 kb on - strand, within B158DRAFT_0487 at 488.096 kb on - strand at 488.168 kb on + strand at 488.173 kb on + strand at 488.239 kb on + strand, within B158DRAFT_0488 at 488.243 kb on - strand, within B158DRAFT_0488 at 488.299 kb on - strand, within B158DRAFT_0488 at 488.312 kb on - strand, within B158DRAFT_0488 at 488.322 kb on + strand, within B158DRAFT_0488 at 488.322 kb on + strand, within B158DRAFT_0488 at 488.397 kb on + strand, within B158DRAFT_0488 at 488.410 kb on + strand, within B158DRAFT_0488 at 488.410 kb on + strand, within B158DRAFT_0488 at 488.418 kb on - strand, within B158DRAFT_0488 at 488.418 kb on - strand, within B158DRAFT_0488 at 488.508 kb on + strand, within B158DRAFT_0488 at 488.516 kb on - strand, within B158DRAFT_0488 at 488.516 kb on - strand, within B158DRAFT_0488 at 488.516 kb on - strand, within B158DRAFT_0488 at 488.545 kb on + strand, within B158DRAFT_0488 at 488.619 kb on + strand at 488.637 kb on + strand at 488.637 kb on + strand at 488.637 kb on + strand at 488.637 kb on + strand at 488.637 kb on + strand at 488.645 kb on - strand at 488.645 kb on - strand at 488.645 kb on - strand at 488.645 kb on - strand at 488.645 kb on - strand at 488.645 kb on - strand at 488.645 kb on - strand at 488.652 kb on - strand at 488.654 kb on + strand at 488.692 kb on + strand at 488.700 kb on - strand at 488.814 kb on - strand, within B158DRAFT_0489 at 488.836 kb on - strand, within B158DRAFT_0489 at 488.916 kb on + strand, within B158DRAFT_0489 at 489.038 kb on + strand, within B158DRAFT_0489 at 489.038 kb on + strand, within B158DRAFT_0489 at 489.038 kb on + strand, within B158DRAFT_0489 at 489.141 kb on + strand, within B158DRAFT_0489 at 489.190 kb on - strand, within B158DRAFT_0489 at 489.205 kb on + strand, within B158DRAFT_0489 at 489.226 kb on + strand, within B158DRAFT_0489 at 489.234 kb on - strand, within B158DRAFT_0489 at 489.301 kb on + strand at 489.303 kb on - strand at 489.315 kb on - strand at 489.365 kb on + strand at 489.373 kb on - strand at 489.378 kb on - strand at 489.410 kb on + strand at 489.418 kb on + strand at 489.436 kb on - strand, within B158DRAFT_0490 at 489.469 kb on + strand, within B158DRAFT_0490 at 489.469 kb on + strand, within B158DRAFT_0490 at 489.469 kb on + strand, within B158DRAFT_0490 at 489.474 kb on + strand, within B158DRAFT_0490 at 489.474 kb on + strand, within B158DRAFT_0490 at 489.474 kb on + strand, within B158DRAFT_0490 at 489.474 kb on + strand, within B158DRAFT_0490 at 489.477 kb on - strand, within B158DRAFT_0490 at 489.477 kb on - strand, within B158DRAFT_0490 at 489.482 kb on - strand, within B158DRAFT_0490 at 489.482 kb on - strand, within B158DRAFT_0490 at 489.635 kb on + strand, within B158DRAFT_0490 at 489.665 kb on + strand, within B158DRAFT_0490 at 489.673 kb on - strand, within B158DRAFT_0490 at 489.680 kb on + strand, within B158DRAFT_0490 at 489.792 kb on + strand, within B158DRAFT_0490 at 489.792 kb on + strand, within B158DRAFT_0490 at 489.792 kb on + strand, within B158DRAFT_0490 at 489.800 kb on - strand, within B158DRAFT_0490 at 489.824 kb on + strand, within B158DRAFT_0490 at 489.832 kb on - strand, within B158DRAFT_0490 at 489.832 kb on - strand, within B158DRAFT_0490 at 489.832 kb on - strand, within B158DRAFT_0490 at 489.847 kb on + strand, within B158DRAFT_0490 at 489.847 kb on + strand, within B158DRAFT_0490 at 489.847 kb on + strand, within B158DRAFT_0490 at 489.847 kb on + strand, within B158DRAFT_0490 at 489.847 kb on + strand, within B158DRAFT_0490 at 489.855 kb on - strand, within B158DRAFT_0490 at 489.855 kb on - strand, within B158DRAFT_0490 at 489.855 kb on - strand, within B158DRAFT_0490 at 489.855 kb on - strand, within B158DRAFT_0490 at 489.855 kb on - strand, within B158DRAFT_0490 at 489.911 kb on + strand, within B158DRAFT_0490 at 489.919 kb on - strand, within B158DRAFT_0490 at 489.924 kb on + strand, within B158DRAFT_0490 at 489.958 kb on - strand, within B158DRAFT_0490 at 489.958 kb on - strand, within B158DRAFT_0490 at 490.024 kb on - strand, within B158DRAFT_0490 at 490.032 kb on - strand, within B158DRAFT_0490 at 490.065 kb on + strand, within B158DRAFT_0490 at 490.065 kb on + strand, within B158DRAFT_0490 at 490.075 kb on + strand, within B158DRAFT_0490 at 490.088 kb on + strand, within B158DRAFT_0490 at 490.096 kb on - strand, within B158DRAFT_0490 at 490.152 kb on + strand, within B158DRAFT_0490 at 490.152 kb on + strand, within B158DRAFT_0490 at 490.152 kb on + strand, within B158DRAFT_0490 at 490.152 kb on - strand, within B158DRAFT_0490 at 490.160 kb on - strand, within B158DRAFT_0490 at 490.160 kb on - strand, within B158DRAFT_0490 at 490.160 kb on - strand, within B158DRAFT_0490 at 490.162 kb on + strand, within B158DRAFT_0490 at 490.162 kb on + strand, within B158DRAFT_0490 at 490.165 kb on - strand, within B158DRAFT_0490 at 490.165 kb on - strand, within B158DRAFT_0490 at 490.167 kb on + strand, within B158DRAFT_0490 at 490.167 kb on + strand, within B158DRAFT_0490 at 490.170 kb on - strand, within B158DRAFT_0490 at 490.170 kb on - strand, within B158DRAFT_0490 at 490.170 kb on - strand, within B158DRAFT_0490 at 490.172 kb on + strand, within B158DRAFT_0490 at 490.172 kb on + strand, within B158DRAFT_0490 at 490.172 kb on + strand, within B158DRAFT_0490 at 490.175 kb on - strand at 490.180 kb on - strand at 490.265 kb on + strand at 490.305 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.00390625 mg/ml remove 487,769 + -0.3 487,818 + +2.2 487,818 + +0.2 487,818 + +0.8 487,820 - +5.6 487,826 - B158DRAFT_0487 0.10 -0.1 487,864 + B158DRAFT_0487 0.22 -1.1 487,864 + B158DRAFT_0487 0.22 -1.9 487,864 + B158DRAFT_0487 0.22 +0.5 487,872 - B158DRAFT_0487 0.25 +0.5 487,872 - B158DRAFT_0487 0.25 +2.4 487,872 - B158DRAFT_0487 0.25 +0.4 487,887 - B158DRAFT_0487 0.30 -0.2 487,929 - B158DRAFT_0487 0.43 -0.0 487,954 - B158DRAFT_0487 0.51 +1.4 487,970 - B158DRAFT_0487 0.56 +0.5 487,970 - B158DRAFT_0487 0.56 +1.1 488,032 - B158DRAFT_0487 0.76 -0.2 488,042 + B158DRAFT_0487 0.79 +2.5 488,042 + B158DRAFT_0487 0.79 +1.2 488,050 - B158DRAFT_0487 0.81 +0.1 488,096 - +1.3 488,168 + +0.8 488,173 + +0.7 488,239 + B158DRAFT_0488 0.13 +2.6 488,243 - B158DRAFT_0488 0.14 +1.6 488,299 - B158DRAFT_0488 0.26 +1.2 488,312 - B158DRAFT_0488 0.29 +1.0 488,322 + B158DRAFT_0488 0.32 +1.4 488,322 + B158DRAFT_0488 0.32 +0.5 488,397 + B158DRAFT_0488 0.49 +2.1 488,410 + B158DRAFT_0488 0.51 +1.0 488,410 + B158DRAFT_0488 0.51 +2.4 488,418 - B158DRAFT_0488 0.53 +2.0 488,418 - B158DRAFT_0488 0.53 +2.4 488,508 + B158DRAFT_0488 0.74 +2.7 488,516 - B158DRAFT_0488 0.76 -0.5 488,516 - B158DRAFT_0488 0.76 +3.0 488,516 - B158DRAFT_0488 0.76 +1.7 488,545 + B158DRAFT_0488 0.82 +1.8 488,619 + +1.7 488,637 + -0.5 488,637 + +1.6 488,637 + +2.3 488,637 + +0.3 488,637 + +2.6 488,645 - -0.5 488,645 - +1.3 488,645 - +0.5 488,645 - -0.3 488,645 - +0.8 488,645 - -0.3 488,645 - +0.0 488,652 - +1.6 488,654 + +1.6 488,692 + +0.0 488,700 - +0.3 488,814 - B158DRAFT_0489 0.21 -0.2 488,836 - B158DRAFT_0489 0.24 +0.4 488,916 + B158DRAFT_0489 0.37 -0.5 489,038 + B158DRAFT_0489 0.57 -0.8 489,038 + B158DRAFT_0489 0.57 -0.7 489,038 + B158DRAFT_0489 0.57 -0.1 489,141 + B158DRAFT_0489 0.73 -1.1 489,190 - B158DRAFT_0489 0.81 +0.2 489,205 + B158DRAFT_0489 0.83 -0.5 489,226 + B158DRAFT_0489 0.87 -0.2 489,234 - B158DRAFT_0489 0.88 -1.5 489,301 + -0.1 489,303 - +0.5 489,315 - -0.2 489,365 + +0.3 489,373 - -0.6 489,378 - -0.4 489,410 + +0.5 489,418 + -1.2 489,436 - B158DRAFT_0490 0.10 -0.4 489,469 + B158DRAFT_0490 0.14 +0.1 489,469 + B158DRAFT_0490 0.14 -0.1 489,469 + B158DRAFT_0490 0.14 -0.2 489,474 + B158DRAFT_0490 0.14 -0.8 489,474 + B158DRAFT_0490 0.14 +0.6 489,474 + B158DRAFT_0490 0.14 -0.0 489,474 + B158DRAFT_0490 0.14 +0.6 489,477 - B158DRAFT_0490 0.14 -1.8 489,477 - B158DRAFT_0490 0.14 +0.9 489,482 - B158DRAFT_0490 0.15 -0.5 489,482 - B158DRAFT_0490 0.15 +0.3 489,635 + B158DRAFT_0490 0.32 -0.3 489,665 + B158DRAFT_0490 0.35 -0.3 489,673 - B158DRAFT_0490 0.36 +0.2 489,680 + B158DRAFT_0490 0.36 -0.6 489,792 + B158DRAFT_0490 0.49 -0.8 489,792 + B158DRAFT_0490 0.49 +0.1 489,792 + B158DRAFT_0490 0.49 -0.9 489,800 - B158DRAFT_0490 0.50 +1.0 489,824 + B158DRAFT_0490 0.52 +0.4 489,832 - B158DRAFT_0490 0.53 -0.1 489,832 - B158DRAFT_0490 0.53 -0.3 489,832 - B158DRAFT_0490 0.53 -0.3 489,847 + B158DRAFT_0490 0.55 -0.7 489,847 + B158DRAFT_0490 0.55 -0.0 489,847 + B158DRAFT_0490 0.55 -0.1 489,847 + B158DRAFT_0490 0.55 -2.0 489,847 + B158DRAFT_0490 0.55 -0.5 489,855 - B158DRAFT_0490 0.55 +0.2 489,855 - B158DRAFT_0490 0.55 -0.7 489,855 - B158DRAFT_0490 0.55 -0.7 489,855 - B158DRAFT_0490 0.55 +0.0 489,855 - B158DRAFT_0490 0.55 -0.7 489,911 + B158DRAFT_0490 0.62 -0.1 489,919 - B158DRAFT_0490 0.62 -0.7 489,924 + B158DRAFT_0490 0.63 +0.1 489,958 - B158DRAFT_0490 0.67 -0.8 489,958 - B158DRAFT_0490 0.67 -0.7 490,024 - B158DRAFT_0490 0.74 +0.1 490,032 - B158DRAFT_0490 0.75 -2.5 490,065 + B158DRAFT_0490 0.78 +1.8 490,065 + B158DRAFT_0490 0.78 +0.2 490,075 + B158DRAFT_0490 0.79 -0.2 490,088 + B158DRAFT_0490 0.81 -0.4 490,096 - B158DRAFT_0490 0.82 -0.9 490,152 + B158DRAFT_0490 0.88 -0.2 490,152 + B158DRAFT_0490 0.88 +1.3 490,152 + B158DRAFT_0490 0.88 +0.2 490,152 - B158DRAFT_0490 0.88 -0.2 490,160 - B158DRAFT_0490 0.89 -1.1 490,160 - B158DRAFT_0490 0.89 -0.3 490,160 - B158DRAFT_0490 0.89 +0.8 490,162 + B158DRAFT_0490 0.89 -0.4 490,162 + B158DRAFT_0490 0.89 -1.5 490,165 - B158DRAFT_0490 0.89 -0.5 490,165 - B158DRAFT_0490 0.89 -1.4 490,167 + B158DRAFT_0490 0.89 -0.1 490,167 + B158DRAFT_0490 0.89 +0.8 490,170 - B158DRAFT_0490 0.90 -0.1 490,170 - B158DRAFT_0490 0.90 +0.1 490,170 - B158DRAFT_0490 0.90 -1.2 490,172 + B158DRAFT_0490 0.90 -0.1 490,172 + B158DRAFT_0490 0.90 +0.6 490,172 + B158DRAFT_0490 0.90 +0.2 490,175 - -0.6 490,180 - -0.3 490,265 + +0.4 490,305 + -0.7
Or see this region's nucleotide sequence