Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0335

Experiment: m.b. Paraquat dichloride 0.00390625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0333 and B158DRAFT_0334 are separated by 103 nucleotidesB158DRAFT_0334 and B158DRAFT_0335 are separated by 19 nucleotidesB158DRAFT_0335 and B158DRAFT_0336 are separated by 249 nucleotidesB158DRAFT_0336 and B158DRAFT_0337 are separated by 103 nucleotides B158DRAFT_0333: B158DRAFT_0333 - Domain of unknown function (DUF1996)., at 334,999 to 336,411 _0333 B158DRAFT_0334: B158DRAFT_0334 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 336,515 to 337,177 _0334 B158DRAFT_0335: B158DRAFT_0335 - Signal transduction histidine kinase, at 337,197 to 338,639 _0335 B158DRAFT_0336: B158DRAFT_0336 - hypothetical protein, at 338,889 to 339,176 _0336 B158DRAFT_0337: B158DRAFT_0337 - hypothetical protein, at 339,280 to 339,687 _0337 Position (kb) 337 338 339Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 336.208 kb on + strand, within B158DRAFT_0333at 336.228 kb on - strand, within B158DRAFT_0333at 336.323 kb on - strandat 336.368 kb on + strandat 336.376 kb on - strandat 336.418 kb on + strandat 336.450 kb on - strandat 336.458 kb on - strandat 336.458 kb on - strandat 336.458 kb on - strandat 336.502 kb on + strandat 336.567 kb on + strandat 336.611 kb on + strand, within B158DRAFT_0334at 336.715 kb on + strand, within B158DRAFT_0334at 336.794 kb on + strand, within B158DRAFT_0334at 336.794 kb on + strand, within B158DRAFT_0334at 336.794 kb on + strand, within B158DRAFT_0334at 336.794 kb on + strand, within B158DRAFT_0334at 336.802 kb on - strand, within B158DRAFT_0334at 336.802 kb on - strand, within B158DRAFT_0334at 336.824 kb on + strand, within B158DRAFT_0334at 336.824 kb on + strand, within B158DRAFT_0334at 336.824 kb on + strand, within B158DRAFT_0334at 336.832 kb on - strand, within B158DRAFT_0334at 336.871 kb on - strand, within B158DRAFT_0334at 336.943 kb on + strand, within B158DRAFT_0334at 336.988 kb on + strand, within B158DRAFT_0334at 337.012 kb on + strand, within B158DRAFT_0334at 337.087 kb on - strand, within B158DRAFT_0334at 337.124 kb on + strandat 337.179 kb on + strandat 337.189 kb on + strandat 337.192 kb on - strandat 337.197 kb on - strandat 337.237 kb on - strandat 337.279 kb on - strandat 337.351 kb on + strand, within B158DRAFT_0335at 337.475 kb on - strand, within B158DRAFT_0335at 337.486 kb on + strand, within B158DRAFT_0335at 337.486 kb on - strand, within B158DRAFT_0335at 337.489 kb on - strand, within B158DRAFT_0335at 337.494 kb on - strand, within B158DRAFT_0335at 337.494 kb on - strand, within B158DRAFT_0335at 337.498 kb on + strand, within B158DRAFT_0335at 337.557 kb on - strand, within B158DRAFT_0335at 337.654 kb on - strand, within B158DRAFT_0335at 337.683 kb on + strand, within B158DRAFT_0335at 337.910 kb on + strand, within B158DRAFT_0335at 337.910 kb on + strand, within B158DRAFT_0335at 337.910 kb on + strand, within B158DRAFT_0335at 337.910 kb on + strand, within B158DRAFT_0335at 337.918 kb on - strand, within B158DRAFT_0335at 337.918 kb on - strand, within B158DRAFT_0335at 337.918 kb on - strand, within B158DRAFT_0335at 337.918 kb on - strand, within B158DRAFT_0335at 337.957 kb on + strand, within B158DRAFT_0335at 337.963 kb on + strand, within B158DRAFT_0335at 337.963 kb on + strand, within B158DRAFT_0335at 337.971 kb on - strand, within B158DRAFT_0335at 338.031 kb on + strand, within B158DRAFT_0335at 338.055 kb on + strand, within B158DRAFT_0335at 338.060 kb on + strand, within B158DRAFT_0335at 338.063 kb on - strand, within B158DRAFT_0335at 338.087 kb on + strand, within B158DRAFT_0335at 338.087 kb on + strand, within B158DRAFT_0335at 338.151 kb on - strand, within B158DRAFT_0335at 338.167 kb on + strand, within B158DRAFT_0335at 338.175 kb on - strand, within B158DRAFT_0335at 338.175 kb on - strand, within B158DRAFT_0335at 338.186 kb on - strand, within B158DRAFT_0335at 338.219 kb on - strand, within B158DRAFT_0335at 338.234 kb on + strand, within B158DRAFT_0335at 338.234 kb on + strand, within B158DRAFT_0335at 338.247 kb on - strand, within B158DRAFT_0335at 338.274 kb on - strand, within B158DRAFT_0335at 338.383 kb on + strand, within B158DRAFT_0335at 338.408 kb on - strand, within B158DRAFT_0335at 338.486 kb on - strand, within B158DRAFT_0335at 338.514 kb on - strandat 338.571 kb on + strandat 338.676 kb on - strandat 338.689 kb on + strandat 338.720 kb on + strandat 338.749 kb on + strandat 338.757 kb on + strandat 338.860 kb on + strandat 338.894 kb on + strandat 338.920 kb on + strand, within B158DRAFT_0336at 339.007 kb on + strand, within B158DRAFT_0336at 339.209 kb on + strandat 339.226 kb on + strandat 339.329 kb on - strand, within B158DRAFT_0337at 339.371 kb on + strand, within B158DRAFT_0337at 339.379 kb on - strand, within B158DRAFT_0337at 339.379 kb on - strand, within B158DRAFT_0337at 339.403 kb on - strand, within B158DRAFT_0337at 339.418 kb on + strand, within B158DRAFT_0337at 339.619 kb on - strand, within B158DRAFT_0337

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.00390625 mg/ml
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336,208 + B158DRAFT_0333 0.86 -0.6
336,228 - B158DRAFT_0333 0.87 -0.7
336,323 - -0.8
336,368 + -0.8
336,376 - -0.2
336,418 + -0.8
336,450 - +0.4
336,458 - -0.6
336,458 - -0.3
336,458 - +1.6
336,502 + -0.6
336,567 + +1.0
336,611 + B158DRAFT_0334 0.14 +0.4
336,715 + B158DRAFT_0334 0.30 +0.7
336,794 + B158DRAFT_0334 0.42 +0.9
336,794 + B158DRAFT_0334 0.42 +3.7
336,794 + B158DRAFT_0334 0.42 +0.6
336,794 + B158DRAFT_0334 0.42 +0.3
336,802 - B158DRAFT_0334 0.43 -0.5
336,802 - B158DRAFT_0334 0.43 +0.2
336,824 + B158DRAFT_0334 0.47 +0.7
336,824 + B158DRAFT_0334 0.47 +0.5
336,824 + B158DRAFT_0334 0.47 -0.3
336,832 - B158DRAFT_0334 0.48 +2.5
336,871 - B158DRAFT_0334 0.54 -1.3
336,943 + B158DRAFT_0334 0.65 -0.7
336,988 + B158DRAFT_0334 0.71 -0.2
337,012 + B158DRAFT_0334 0.75 -1.8
337,087 - B158DRAFT_0334 0.86 -0.5
337,124 + +0.5
337,179 + +0.1
337,189 + +0.5
337,192 - +0.0
337,197 - -0.4
337,237 - -0.3
337,279 - -0.2
337,351 + B158DRAFT_0335 0.11 -0.3
337,475 - B158DRAFT_0335 0.19 -1.5
337,486 + B158DRAFT_0335 0.20 -0.1
337,486 - B158DRAFT_0335 0.20 +0.1
337,489 - B158DRAFT_0335 0.20 -0.2
337,494 - B158DRAFT_0335 0.21 -0.6
337,494 - B158DRAFT_0335 0.21 -0.3
337,498 + B158DRAFT_0335 0.21 -0.2
337,557 - B158DRAFT_0335 0.25 -0.2
337,654 - B158DRAFT_0335 0.32 -0.3
337,683 + B158DRAFT_0335 0.34 -0.3
337,910 + B158DRAFT_0335 0.49 -0.7
337,910 + B158DRAFT_0335 0.49 +1.5
337,910 + B158DRAFT_0335 0.49 -0.2
337,910 + B158DRAFT_0335 0.49 +0.3
337,918 - B158DRAFT_0335 0.50 -0.8
337,918 - B158DRAFT_0335 0.50 -0.0
337,918 - B158DRAFT_0335 0.50 -0.2
337,918 - B158DRAFT_0335 0.50 -0.4
337,957 + B158DRAFT_0335 0.53 -0.4
337,963 + B158DRAFT_0335 0.53 +0.5
337,963 + B158DRAFT_0335 0.53 +0.5
337,971 - B158DRAFT_0335 0.54 -1.6
338,031 + B158DRAFT_0335 0.58 -0.8
338,055 + B158DRAFT_0335 0.59 +0.3
338,060 + B158DRAFT_0335 0.60 +0.2
338,063 - B158DRAFT_0335 0.60 +0.6
338,087 + B158DRAFT_0335 0.62 -0.6
338,087 + B158DRAFT_0335 0.62 +1.5
338,151 - B158DRAFT_0335 0.66 +1.1
338,167 + B158DRAFT_0335 0.67 -0.4
338,175 - B158DRAFT_0335 0.68 -0.2
338,175 - B158DRAFT_0335 0.68 -0.8
338,186 - B158DRAFT_0335 0.69 -0.1
338,219 - B158DRAFT_0335 0.71 -0.5
338,234 + B158DRAFT_0335 0.72 -1.3
338,234 + B158DRAFT_0335 0.72 +0.2
338,247 - B158DRAFT_0335 0.73 +1.6
338,274 - B158DRAFT_0335 0.75 -0.3
338,383 + B158DRAFT_0335 0.82 +0.5
338,408 - B158DRAFT_0335 0.84 +1.5
338,486 - B158DRAFT_0335 0.89 +0.1
338,514 - +0.4
338,571 + -0.4
338,676 - -1.3
338,689 + -0.9
338,720 + +0.3
338,749 + -0.1
338,757 + -0.6
338,860 + +4.3
338,894 + +0.1
338,920 + B158DRAFT_0336 0.11 -0.1
339,007 + B158DRAFT_0336 0.41 -1.2
339,209 + -0.8
339,226 + -0.4
339,329 - B158DRAFT_0337 0.12 -0.8
339,371 + B158DRAFT_0337 0.22 +3.7
339,379 - B158DRAFT_0337 0.24 +0.2
339,379 - B158DRAFT_0337 0.24 -0.3
339,403 - B158DRAFT_0337 0.30 -0.3
339,418 + B158DRAFT_0337 0.34 -0.6
339,619 - B158DRAFT_0337 0.83 -0.4

Or see this region's nucleotide sequence