Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0304

Experiment: m.b. Paraquat dichloride 0.00390625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0302 and B158DRAFT_0303 are separated by 84 nucleotidesB158DRAFT_0303 and B158DRAFT_0304 are separated by 15 nucleotidesB158DRAFT_0304 and B158DRAFT_0305 overlap by 4 nucleotides B158DRAFT_0302: B158DRAFT_0302 - Predicted membrane protein, at 306,723 to 307,262 _0302 B158DRAFT_0303: B158DRAFT_0303 - TspO and MBR related proteins, at 307,347 to 307,859 _0303 B158DRAFT_0304: B158DRAFT_0304 - PAS domain S-box/diguanylate cyclase (GGDEF) domain, at 307,875 to 309,242 _0304 B158DRAFT_0305: B158DRAFT_0305 - ATPase, P-type (transporting), HAD superfamily, subfamily IC, at 309,239 to 311,950 _0305 Position (kb) 307 308 309 310Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5 6at 306.904 kb on - strand, within B158DRAFT_0302at 306.905 kb on - strand, within B158DRAFT_0302at 306.905 kb on - strand, within B158DRAFT_0302at 306.923 kb on + strand, within B158DRAFT_0302at 306.970 kb on + strand, within B158DRAFT_0302at 307.057 kb on - strand, within B158DRAFT_0302at 307.061 kb on - strand, within B158DRAFT_0302at 307.063 kb on + strand, within B158DRAFT_0302at 307.063 kb on + strand, within B158DRAFT_0302at 307.070 kb on + strand, within B158DRAFT_0302at 307.083 kb on + strand, within B158DRAFT_0302at 307.088 kb on + strand, within B158DRAFT_0302at 307.088 kb on + strand, within B158DRAFT_0302at 307.118 kb on + strand, within B158DRAFT_0302at 307.133 kb on - strand, within B158DRAFT_0302at 307.151 kb on - strand, within B158DRAFT_0302at 307.199 kb on + strand, within B158DRAFT_0302at 307.211 kb on + strandat 307.214 kb on - strandat 307.228 kb on - strandat 307.696 kb on + strand, within B158DRAFT_0303at 307.704 kb on - strand, within B158DRAFT_0303at 307.731 kb on - strand, within B158DRAFT_0303at 307.757 kb on - strand, within B158DRAFT_0303at 308.092 kb on + strand, within B158DRAFT_0304at 308.153 kb on - strand, within B158DRAFT_0304at 308.155 kb on + strand, within B158DRAFT_0304at 308.163 kb on - strand, within B158DRAFT_0304at 308.163 kb on - strand, within B158DRAFT_0304at 308.163 kb on - strand, within B158DRAFT_0304at 308.347 kb on - strand, within B158DRAFT_0304at 308.375 kb on - strand, within B158DRAFT_0304at 308.375 kb on - strand, within B158DRAFT_0304at 308.437 kb on + strand, within B158DRAFT_0304at 308.819 kb on + strand, within B158DRAFT_0304at 308.819 kb on + strand, within B158DRAFT_0304at 308.819 kb on + strand, within B158DRAFT_0304at 308.824 kb on + strand, within B158DRAFT_0304at 308.827 kb on - strand, within B158DRAFT_0304at 308.827 kb on - strand, within B158DRAFT_0304at 308.827 kb on - strand, within B158DRAFT_0304at 308.876 kb on - strand, within B158DRAFT_0304at 308.899 kb on + strand, within B158DRAFT_0304at 308.936 kb on + strand, within B158DRAFT_0304at 308.948 kb on + strand, within B158DRAFT_0304at 309.006 kb on + strand, within B158DRAFT_0304at 309.014 kb on + strand, within B158DRAFT_0304at 309.113 kb on + strandat 309.155 kb on - strandat 309.265 kb on + strandat 309.265 kb on + strandat 309.265 kb on + strandat 309.270 kb on + strandat 309.278 kb on - strandat 309.315 kb on - strandat 309.340 kb on + strandat 309.406 kb on + strandat 309.406 kb on + strandat 309.414 kb on - strandat 309.416 kb on + strandat 309.450 kb on - strandat 309.577 kb on + strand, within B158DRAFT_0305at 309.587 kb on + strand, within B158DRAFT_0305at 309.691 kb on + strand, within B158DRAFT_0305at 309.691 kb on + strand, within B158DRAFT_0305at 309.699 kb on - strand, within B158DRAFT_0305at 309.735 kb on - strand, within B158DRAFT_0305at 309.740 kb on + strand, within B158DRAFT_0305at 309.748 kb on - strand, within B158DRAFT_0305at 309.869 kb on - strand, within B158DRAFT_0305at 310.070 kb on + strand, within B158DRAFT_0305at 310.072 kb on + strand, within B158DRAFT_0305at 310.088 kb on - strand, within B158DRAFT_0305at 310.107 kb on + strand, within B158DRAFT_0305at 310.107 kb on + strand, within B158DRAFT_0305at 310.107 kb on + strand, within B158DRAFT_0305at 310.107 kb on + strand, within B158DRAFT_0305at 310.115 kb on - strand, within B158DRAFT_0305at 310.182 kb on + strand, within B158DRAFT_0305at 310.187 kb on + strand, within B158DRAFT_0305

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.00390625 mg/ml
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306,904 - B158DRAFT_0302 0.34 -1.0
306,905 - B158DRAFT_0302 0.34 -0.2
306,905 - B158DRAFT_0302 0.34 -0.1
306,923 + B158DRAFT_0302 0.37 -0.6
306,970 + B158DRAFT_0302 0.46 -1.4
307,057 - B158DRAFT_0302 0.62 -0.9
307,061 - B158DRAFT_0302 0.63 -0.9
307,063 + B158DRAFT_0302 0.63 -0.6
307,063 + B158DRAFT_0302 0.63 +4.9
307,070 + B158DRAFT_0302 0.64 -1.4
307,083 + B158DRAFT_0302 0.67 -0.4
307,088 + B158DRAFT_0302 0.68 -0.8
307,088 + B158DRAFT_0302 0.68 +0.3
307,118 + B158DRAFT_0302 0.73 +0.6
307,133 - B158DRAFT_0302 0.76 -0.1
307,151 - B158DRAFT_0302 0.79 +0.1
307,199 + B158DRAFT_0302 0.88 +0.7
307,211 + +2.3
307,214 - +4.4
307,228 - +0.2
307,696 + B158DRAFT_0303 0.68 +2.2
307,704 - B158DRAFT_0303 0.70 -0.6
307,731 - B158DRAFT_0303 0.75 -0.7
307,757 - B158DRAFT_0303 0.80 -0.4
308,092 + B158DRAFT_0304 0.16 -0.9
308,153 - B158DRAFT_0304 0.20 +0.5
308,155 + B158DRAFT_0304 0.20 -0.7
308,163 - B158DRAFT_0304 0.21 +0.5
308,163 - B158DRAFT_0304 0.21 -0.3
308,163 - B158DRAFT_0304 0.21 -0.4
308,347 - B158DRAFT_0304 0.35 -0.5
308,375 - B158DRAFT_0304 0.37 -0.2
308,375 - B158DRAFT_0304 0.37 -2.4
308,437 + B158DRAFT_0304 0.41 -0.1
308,819 + B158DRAFT_0304 0.69 +0.1
308,819 + B158DRAFT_0304 0.69 -0.4
308,819 + B158DRAFT_0304 0.69 -0.1
308,824 + B158DRAFT_0304 0.69 -0.5
308,827 - B158DRAFT_0304 0.70 +0.4
308,827 - B158DRAFT_0304 0.70 -1.4
308,827 - B158DRAFT_0304 0.70 +0.2
308,876 - B158DRAFT_0304 0.73 -0.5
308,899 + B158DRAFT_0304 0.75 -0.0
308,936 + B158DRAFT_0304 0.78 -0.0
308,948 + B158DRAFT_0304 0.78 +0.1
309,006 + B158DRAFT_0304 0.83 +0.8
309,014 + B158DRAFT_0304 0.83 -0.2
309,113 + -0.9
309,155 - -1.6
309,265 + -0.4
309,265 + -0.2
309,265 + -0.5
309,270 + -1.4
309,278 - +0.1
309,315 - -0.5
309,340 + -0.8
309,406 + -0.3
309,406 + +0.3
309,414 - -0.9
309,416 + +0.2
309,450 - -1.2
309,577 + B158DRAFT_0305 0.12 -0.7
309,587 + B158DRAFT_0305 0.13 +5.1
309,691 + B158DRAFT_0305 0.17 +0.1
309,691 + B158DRAFT_0305 0.17 +0.1
309,699 - B158DRAFT_0305 0.17 +0.8
309,735 - B158DRAFT_0305 0.18 +0.1
309,740 + B158DRAFT_0305 0.18 -1.7
309,748 - B158DRAFT_0305 0.19 -1.0
309,869 - B158DRAFT_0305 0.23 -0.4
310,070 + B158DRAFT_0305 0.31 -0.8
310,072 + B158DRAFT_0305 0.31 -0.5
310,088 - B158DRAFT_0305 0.31 -1.7
310,107 + B158DRAFT_0305 0.32 +0.2
310,107 + B158DRAFT_0305 0.32 -0.3
310,107 + B158DRAFT_0305 0.32 +2.1
310,107 + B158DRAFT_0305 0.32 -0.6
310,115 - B158DRAFT_0305 0.32 -1.5
310,182 + B158DRAFT_0305 0.35 -0.6
310,187 + B158DRAFT_0305 0.35 +5.8

Or see this region's nucleotide sequence