Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0252

Experiment: m.b. Paraquat dichloride 0.00390625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0250 and B158DRAFT_0251 are separated by 6 nucleotidesB158DRAFT_0251 and B158DRAFT_0252 are separated by 74 nucleotidesB158DRAFT_0252 and B158DRAFT_0253 are separated by 16 nucleotidesB158DRAFT_0253 and B158DRAFT_0254 are separated by 102 nucleotides B158DRAFT_0250: B158DRAFT_0250 - Predicted signal transduction protein with a C-terminal ATPase domain, at 256,270 to 257,307 _0250 B158DRAFT_0251: B158DRAFT_0251 - two component transcriptional regulator, LytTR family, at 257,314 to 258,018 _0251 B158DRAFT_0252: B158DRAFT_0252 - hydroxymethylbilane synthase (EC 2.5.1.61), at 258,093 to 259,028 _0252 B158DRAFT_0253: B158DRAFT_0253 - Uroporphyrinogen-III synthase, at 259,045 to 259,797 _0253 B158DRAFT_0254: B158DRAFT_0254 - Uncharacterized enzyme of heme biosynthesis, at 259,900 to 261,183 _0254 Position (kb) 258 259 260Strain fitness (log2 ratio) -3 -2 -1 0 1at 257.094 kb on + strand, within B158DRAFT_0250at 257.136 kb on + strand, within B158DRAFT_0250at 257.136 kb on + strand, within B158DRAFT_0250at 257.177 kb on - strand, within B158DRAFT_0250at 257.183 kb on - strand, within B158DRAFT_0250at 257.210 kb on + strandat 257.229 kb on - strandat 257.340 kb on + strandat 257.384 kb on + strandat 257.397 kb on - strand, within B158DRAFT_0251at 257.412 kb on + strand, within B158DRAFT_0251at 257.427 kb on - strand, within B158DRAFT_0251at 257.444 kb on + strand, within B158DRAFT_0251at 257.466 kb on - strand, within B158DRAFT_0251at 257.542 kb on + strand, within B158DRAFT_0251at 257.542 kb on + strand, within B158DRAFT_0251at 257.640 kb on + strand, within B158DRAFT_0251at 257.677 kb on + strand, within B158DRAFT_0251at 257.687 kb on + strand, within B158DRAFT_0251at 257.805 kb on - strand, within B158DRAFT_0251at 257.867 kb on + strand, within B158DRAFT_0251at 257.875 kb on - strand, within B158DRAFT_0251at 257.875 kb on - strand, within B158DRAFT_0251at 257.875 kb on - strand, within B158DRAFT_0251at 257.875 kb on - strand, within B158DRAFT_0251at 257.875 kb on - strand, within B158DRAFT_0251at 257.885 kb on - strand, within B158DRAFT_0251at 257.898 kb on - strand, within B158DRAFT_0251at 257.908 kb on - strand, within B158DRAFT_0251at 259.022 kb on + strandat 259.911 kb on + strandat 259.919 kb on - strandat 259.919 kb on - strandat 260.010 kb on + strandat 260.015 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.00390625 mg/ml
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257,094 + B158DRAFT_0250 0.79 -0.8
257,136 + B158DRAFT_0250 0.83 +0.1
257,136 + B158DRAFT_0250 0.83 -0.1
257,177 - B158DRAFT_0250 0.87 -1.2
257,183 - B158DRAFT_0250 0.88 -1.3
257,210 + -2.4
257,229 - -0.4
257,340 + -1.5
257,384 + -3.3
257,397 - B158DRAFT_0251 0.12 -1.2
257,412 + B158DRAFT_0251 0.14 -1.0
257,427 - B158DRAFT_0251 0.16 -0.8
257,444 + B158DRAFT_0251 0.18 -0.1
257,466 - B158DRAFT_0251 0.22 +0.2
257,542 + B158DRAFT_0251 0.32 -0.9
257,542 + B158DRAFT_0251 0.32 -1.0
257,640 + B158DRAFT_0251 0.46 +0.2
257,677 + B158DRAFT_0251 0.51 -0.8
257,687 + B158DRAFT_0251 0.53 -0.8
257,805 - B158DRAFT_0251 0.70 -0.6
257,867 + B158DRAFT_0251 0.78 -0.9
257,875 - B158DRAFT_0251 0.80 +0.1
257,875 - B158DRAFT_0251 0.80 -1.1
257,875 - B158DRAFT_0251 0.80 -1.5
257,875 - B158DRAFT_0251 0.80 -0.5
257,875 - B158DRAFT_0251 0.80 +0.7
257,885 - B158DRAFT_0251 0.81 +0.0
257,898 - B158DRAFT_0251 0.83 -1.4
257,908 - B158DRAFT_0251 0.84 -0.7
259,022 + -0.1
259,911 + -0.1
259,919 - -1.0
259,919 - +1.2
260,010 + +0.3
260,015 + +0.2

Or see this region's nucleotide sequence