Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0249

Experiment: m.b. Paraquat dichloride 0.00390625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0246 and B158DRAFT_0247 overlap by 4 nucleotidesB158DRAFT_0247 and B158DRAFT_0248 are separated by 177 nucleotidesB158DRAFT_0248 and B158DRAFT_0249 are separated by 30 nucleotidesB158DRAFT_0249 and B158DRAFT_0250 are separated by 120 nucleotides B158DRAFT_0246: B158DRAFT_0246 - diaminopimelate epimerase (EC 5.1.1.7), at 253,901 to 254,731 _0246 B158DRAFT_0247: B158DRAFT_0247 - hypothetical protein, at 254,728 to 254,955 _0247 B158DRAFT_0248: B158DRAFT_0248 - iron donor protein CyaY, at 255,133 to 255,450 _0248 B158DRAFT_0249: B158DRAFT_0249 - Predicted esterase, at 255,481 to 256,149 _0249 B158DRAFT_0250: B158DRAFT_0250 - Predicted signal transduction protein with a C-terminal ATPase domain, at 256,270 to 257,307 _0250 Position (kb) 255 256 257Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5 6at 254.822 kb on - strand, within B158DRAFT_0247at 254.822 kb on - strand, within B158DRAFT_0247at 255.007 kb on - strandat 255.041 kb on + strandat 255.054 kb on - strandat 255.065 kb on + strandat 255.070 kb on + strandat 255.102 kb on + strandat 255.102 kb on + strandat 255.160 kb on + strandat 255.198 kb on - strand, within B158DRAFT_0248at 255.316 kb on + strand, within B158DRAFT_0248at 255.334 kb on + strand, within B158DRAFT_0248at 255.342 kb on - strand, within B158DRAFT_0248at 255.407 kb on + strand, within B158DRAFT_0248at 255.419 kb on + strandat 255.437 kb on + strandat 255.437 kb on + strandat 255.518 kb on + strandat 255.525 kb on + strandat 255.533 kb on - strandat 255.564 kb on - strand, within B158DRAFT_0249at 255.611 kb on - strand, within B158DRAFT_0249at 255.654 kb on - strand, within B158DRAFT_0249at 255.734 kb on + strand, within B158DRAFT_0249at 255.752 kb on + strand, within B158DRAFT_0249at 255.955 kb on + strand, within B158DRAFT_0249at 255.963 kb on - strand, within B158DRAFT_0249at 255.987 kb on - strand, within B158DRAFT_0249at 256.018 kb on + strand, within B158DRAFT_0249at 256.060 kb on + strand, within B158DRAFT_0249at 256.060 kb on + strand, within B158DRAFT_0249at 256.105 kb on - strandat 256.105 kb on - strandat 256.115 kb on - strandat 256.258 kb on + strandat 256.258 kb on + strandat 256.258 kb on + strandat 256.258 kb on + strandat 256.258 kb on + strandat 256.266 kb on - strandat 256.266 kb on - strandat 256.266 kb on - strandat 256.326 kb on + strandat 256.340 kb on + strandat 256.342 kb on - strandat 256.358 kb on + strandat 256.366 kb on - strandat 256.366 kb on - strandat 256.366 kb on - strandat 256.428 kb on + strand, within B158DRAFT_0250at 256.447 kb on - strand, within B158DRAFT_0250at 256.454 kb on - strand, within B158DRAFT_0250at 256.456 kb on + strand, within B158DRAFT_0250at 256.456 kb on + strand, within B158DRAFT_0250at 256.456 kb on + strand, within B158DRAFT_0250at 256.456 kb on + strand, within B158DRAFT_0250at 256.456 kb on + strand, within B158DRAFT_0250at 256.464 kb on - strand, within B158DRAFT_0250at 256.464 kb on - strand, within B158DRAFT_0250at 256.464 kb on - strand, within B158DRAFT_0250at 256.474 kb on - strand, within B158DRAFT_0250at 256.474 kb on - strand, within B158DRAFT_0250at 256.512 kb on + strand, within B158DRAFT_0250at 256.577 kb on + strand, within B158DRAFT_0250at 256.577 kb on + strand, within B158DRAFT_0250at 256.580 kb on + strand, within B158DRAFT_0250at 256.625 kb on + strand, within B158DRAFT_0250at 256.633 kb on - strand, within B158DRAFT_0250at 256.633 kb on - strand, within B158DRAFT_0250at 256.652 kb on + strand, within B158DRAFT_0250at 256.682 kb on + strand, within B158DRAFT_0250at 256.682 kb on + strand, within B158DRAFT_0250at 256.690 kb on - strand, within B158DRAFT_0250at 256.690 kb on - strand, within B158DRAFT_0250at 256.705 kb on - strand, within B158DRAFT_0250at 256.719 kb on + strand, within B158DRAFT_0250at 256.726 kb on + strand, within B158DRAFT_0250at 256.878 kb on - strand, within B158DRAFT_0250at 256.878 kb on - strand, within B158DRAFT_0250at 256.880 kb on + strand, within B158DRAFT_0250at 256.880 kb on + strand, within B158DRAFT_0250at 256.888 kb on - strand, within B158DRAFT_0250at 256.932 kb on + strand, within B158DRAFT_0250at 257.050 kb on + strand, within B158DRAFT_0250at 257.052 kb on + strand, within B158DRAFT_0250at 257.058 kb on - strand, within B158DRAFT_0250at 257.060 kb on + strand, within B158DRAFT_0250at 257.060 kb on - strand, within B158DRAFT_0250at 257.060 kb on - strand, within B158DRAFT_0250at 257.062 kb on + strand, within B158DRAFT_0250at 257.062 kb on + strand, within B158DRAFT_0250at 257.062 kb on + strand, within B158DRAFT_0250at 257.062 kb on + strand, within B158DRAFT_0250at 257.062 kb on + strand, within B158DRAFT_0250at 257.062 kb on + strand, within B158DRAFT_0250at 257.062 kb on + strand, within B158DRAFT_0250at 257.062 kb on + strand, within B158DRAFT_0250at 257.062 kb on + strand, within B158DRAFT_0250at 257.062 kb on + strand, within B158DRAFT_0250at 257.062 kb on + strand, within B158DRAFT_0250at 257.062 kb on + strand, within B158DRAFT_0250at 257.062 kb on + strand, within B158DRAFT_0250at 257.062 kb on + strand, within B158DRAFT_0250at 257.062 kb on + strand, within B158DRAFT_0250at 257.062 kb on + strand, within B158DRAFT_0250at 257.062 kb on + strand, within B158DRAFT_0250at 257.062 kb on + strand, within B158DRAFT_0250at 257.062 kb on + strand, within B158DRAFT_0250at 257.062 kb on + strand, within B158DRAFT_0250at 257.062 kb on + strand, within B158DRAFT_0250at 257.062 kb on + strand, within B158DRAFT_0250at 257.062 kb on + strand, within B158DRAFT_0250at 257.062 kb on + strand, within B158DRAFT_0250at 257.062 kb on + strand, within B158DRAFT_0250at 257.062 kb on + strand, within B158DRAFT_0250at 257.062 kb on + strand, within B158DRAFT_0250at 257.062 kb on + strand, within B158DRAFT_0250at 257.062 kb on + strand, within B158DRAFT_0250at 257.062 kb on + strand, within B158DRAFT_0250at 257.062 kb on + strand, within B158DRAFT_0250at 257.062 kb on + strand, within B158DRAFT_0250at 257.062 kb on + strand, within B158DRAFT_0250at 257.062 kb on + strand, within B158DRAFT_0250at 257.062 kb on + strand, within B158DRAFT_0250at 257.062 kb on + strand, within B158DRAFT_0250at 257.062 kb on + strand, within B158DRAFT_0250at 257.062 kb on + strand, within B158DRAFT_0250at 257.062 kb on + strand, within B158DRAFT_0250at 257.067 kb on + strand, within B158DRAFT_0250at 257.070 kb on - strand, within B158DRAFT_0250at 257.070 kb on - strand, within B158DRAFT_0250at 257.070 kb on - strand, within B158DRAFT_0250at 257.070 kb on - strand, within B158DRAFT_0250at 257.070 kb on - strand, within B158DRAFT_0250at 257.070 kb on - strand, within B158DRAFT_0250at 257.070 kb on - strand, within B158DRAFT_0250at 257.070 kb on - strand, within B158DRAFT_0250at 257.070 kb on - strand, within B158DRAFT_0250at 257.070 kb on - strand, within B158DRAFT_0250at 257.070 kb on - strand, within B158DRAFT_0250at 257.070 kb on - strand, within B158DRAFT_0250at 257.070 kb on - strand, within B158DRAFT_0250at 257.070 kb on - strand, within B158DRAFT_0250at 257.070 kb on - strand, within B158DRAFT_0250at 257.070 kb on - strand, within B158DRAFT_0250at 257.070 kb on - strand, within B158DRAFT_0250at 257.070 kb on - strand, within B158DRAFT_0250at 257.070 kb on - strand, within B158DRAFT_0250at 257.070 kb on - strand, within B158DRAFT_0250at 257.070 kb on - strand, within B158DRAFT_0250at 257.070 kb on - strand, within B158DRAFT_0250at 257.070 kb on - strand, within B158DRAFT_0250at 257.070 kb on - strand, within B158DRAFT_0250at 257.070 kb on - strand, within B158DRAFT_0250at 257.070 kb on - strand, within B158DRAFT_0250at 257.070 kb on - strand, within B158DRAFT_0250at 257.070 kb on - strand, within B158DRAFT_0250at 257.070 kb on - strand, within B158DRAFT_0250at 257.070 kb on - strand, within B158DRAFT_0250at 257.070 kb on - strand, within B158DRAFT_0250at 257.070 kb on - strand, within B158DRAFT_0250at 257.070 kb on - strand, within B158DRAFT_0250at 257.070 kb on - strand, within B158DRAFT_0250at 257.070 kb on - strand, within B158DRAFT_0250at 257.070 kb on - strand, within B158DRAFT_0250at 257.070 kb on - strand, within B158DRAFT_0250at 257.070 kb on - strand, within B158DRAFT_0250at 257.070 kb on - strand, within B158DRAFT_0250at 257.070 kb on - strand, within B158DRAFT_0250at 257.070 kb on - strand, within B158DRAFT_0250at 257.070 kb on - strand, within B158DRAFT_0250at 257.070 kb on - strand, within B158DRAFT_0250at 257.070 kb on - strand, within B158DRAFT_0250at 257.070 kb on - strand, within B158DRAFT_0250at 257.070 kb on - strand, within B158DRAFT_0250at 257.074 kb on + strand, within B158DRAFT_0250at 257.082 kb on - strand, within B158DRAFT_0250at 257.094 kb on + strand, within B158DRAFT_0250at 257.136 kb on + strand, within B158DRAFT_0250at 257.136 kb on + strand, within B158DRAFT_0250

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.00390625 mg/ml
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254,822 - B158DRAFT_0247 0.41 -0.5
254,822 - B158DRAFT_0247 0.41 -2.5
255,007 - -0.1
255,041 + -0.8
255,054 - -0.1
255,065 + -0.4
255,070 + +0.5
255,102 + -0.9
255,102 + -0.1
255,160 + +1.2
255,198 - B158DRAFT_0248 0.20 +1.2
255,316 + B158DRAFT_0248 0.58 +1.7
255,334 + B158DRAFT_0248 0.63 +1.4
255,342 - B158DRAFT_0248 0.66 +1.6
255,407 + B158DRAFT_0248 0.86 -1.5
255,419 + -0.4
255,437 + -0.8
255,437 + +0.6
255,518 + -0.2
255,525 + +0.7
255,533 - +0.4
255,564 - B158DRAFT_0249 0.12 -0.1
255,611 - B158DRAFT_0249 0.19 -0.0
255,654 - B158DRAFT_0249 0.26 -0.1
255,734 + B158DRAFT_0249 0.38 +0.1
255,752 + B158DRAFT_0249 0.41 +0.3
255,955 + B158DRAFT_0249 0.71 +0.4
255,963 - B158DRAFT_0249 0.72 +0.0
255,987 - B158DRAFT_0249 0.76 -0.3
256,018 + B158DRAFT_0249 0.80 -0.6
256,060 + B158DRAFT_0249 0.87 +0.2
256,060 + B158DRAFT_0249 0.87 -0.0
256,105 - -0.3
256,105 - +0.3
256,115 - +0.5
256,258 + +0.7
256,258 + +0.1
256,258 + -1.2
256,258 + -0.2
256,258 + +0.4
256,266 - +0.3
256,266 - +0.6
256,266 - -0.8
256,326 + -0.2
256,340 + -1.2
256,342 - -0.6
256,358 + -0.2
256,366 - +0.5
256,366 - -1.0
256,366 - -0.6
256,428 + B158DRAFT_0250 0.15 +0.9
256,447 - B158DRAFT_0250 0.17 -0.1
256,454 - B158DRAFT_0250 0.18 -0.6
256,456 + B158DRAFT_0250 0.18 -1.4
256,456 + B158DRAFT_0250 0.18 -0.4
256,456 + B158DRAFT_0250 0.18 -0.7
256,456 + B158DRAFT_0250 0.18 -0.6
256,456 + B158DRAFT_0250 0.18 -1.0
256,464 - B158DRAFT_0250 0.19 -1.8
256,464 - B158DRAFT_0250 0.19 -0.3
256,464 - B158DRAFT_0250 0.19 -0.1
256,474 - B158DRAFT_0250 0.20 -0.1
256,474 - B158DRAFT_0250 0.20 -0.2
256,512 + B158DRAFT_0250 0.23 -0.6
256,577 + B158DRAFT_0250 0.30 -0.0
256,577 + B158DRAFT_0250 0.30 -1.1
256,580 + B158DRAFT_0250 0.30 -0.1
256,625 + B158DRAFT_0250 0.34 -1.4
256,633 - B158DRAFT_0250 0.35 +0.2
256,633 - B158DRAFT_0250 0.35 -2.3
256,652 + B158DRAFT_0250 0.37 +0.8
256,682 + B158DRAFT_0250 0.40 +0.2
256,682 + B158DRAFT_0250 0.40 -0.6
256,690 - B158DRAFT_0250 0.40 -0.3
256,690 - B158DRAFT_0250 0.40 +0.7
256,705 - B158DRAFT_0250 0.42 +0.1
256,719 + B158DRAFT_0250 0.43 -1.2
256,726 + B158DRAFT_0250 0.44 -0.7
256,878 - B158DRAFT_0250 0.59 -0.3
256,878 - B158DRAFT_0250 0.59 -0.2
256,880 + B158DRAFT_0250 0.59 -0.8
256,880 + B158DRAFT_0250 0.59 +0.1
256,888 - B158DRAFT_0250 0.60 -1.0
256,932 + B158DRAFT_0250 0.64 -1.5
257,050 + B158DRAFT_0250 0.75 -0.6
257,052 + B158DRAFT_0250 0.75 -0.9
257,058 - B158DRAFT_0250 0.76 -2.3
257,060 + B158DRAFT_0250 0.76 +0.5
257,060 - B158DRAFT_0250 0.76 -1.0
257,060 - B158DRAFT_0250 0.76 -1.7
257,062 + B158DRAFT_0250 0.76 -0.8
257,062 + B158DRAFT_0250 0.76 -1.1
257,062 + B158DRAFT_0250 0.76 -1.7
257,062 + B158DRAFT_0250 0.76 -0.7
257,062 + B158DRAFT_0250 0.76 -1.6
257,062 + B158DRAFT_0250 0.76 -0.6
257,062 + B158DRAFT_0250 0.76 -0.7
257,062 + B158DRAFT_0250 0.76 +0.3
257,062 + B158DRAFT_0250 0.76 +0.3
257,062 + B158DRAFT_0250 0.76 -2.0
257,062 + B158DRAFT_0250 0.76 -0.3
257,062 + B158DRAFT_0250 0.76 -0.7
257,062 + B158DRAFT_0250 0.76 -0.6
257,062 + B158DRAFT_0250 0.76 -1.4
257,062 + B158DRAFT_0250 0.76 -0.6
257,062 + B158DRAFT_0250 0.76 -0.6
257,062 + B158DRAFT_0250 0.76 -0.9
257,062 + B158DRAFT_0250 0.76 -0.5
257,062 + B158DRAFT_0250 0.76 -0.5
257,062 + B158DRAFT_0250 0.76 +1.0
257,062 + B158DRAFT_0250 0.76 -0.7
257,062 + B158DRAFT_0250 0.76 -0.8
257,062 + B158DRAFT_0250 0.76 -0.9
257,062 + B158DRAFT_0250 0.76 +1.9
257,062 + B158DRAFT_0250 0.76 -0.5
257,062 + B158DRAFT_0250 0.76 -0.1
257,062 + B158DRAFT_0250 0.76 +0.1
257,062 + B158DRAFT_0250 0.76 +3.6
257,062 + B158DRAFT_0250 0.76 -1.6
257,062 + B158DRAFT_0250 0.76 -0.4
257,062 + B158DRAFT_0250 0.76 -0.6
257,062 + B158DRAFT_0250 0.76 -1.2
257,062 + B158DRAFT_0250 0.76 +0.3
257,062 + B158DRAFT_0250 0.76 -1.2
257,062 + B158DRAFT_0250 0.76 -0.6
257,062 + B158DRAFT_0250 0.76 +0.5
257,062 + B158DRAFT_0250 0.76 -1.2
257,062 + B158DRAFT_0250 0.76 -1.1
257,062 + B158DRAFT_0250 0.76 +1.1
257,067 + B158DRAFT_0250 0.77 -0.9
257,070 - B158DRAFT_0250 0.77 +0.3
257,070 - B158DRAFT_0250 0.77 +0.3
257,070 - B158DRAFT_0250 0.77 +0.8
257,070 - B158DRAFT_0250 0.77 +0.1
257,070 - B158DRAFT_0250 0.77 -0.6
257,070 - B158DRAFT_0250 0.77 +0.0
257,070 - B158DRAFT_0250 0.77 -0.3
257,070 - B158DRAFT_0250 0.77 -0.9
257,070 - B158DRAFT_0250 0.77 -0.0
257,070 - B158DRAFT_0250 0.77 -0.9
257,070 - B158DRAFT_0250 0.77 -1.0
257,070 - B158DRAFT_0250 0.77 -0.6
257,070 - B158DRAFT_0250 0.77 -0.3
257,070 - B158DRAFT_0250 0.77 -0.5
257,070 - B158DRAFT_0250 0.77 -0.2
257,070 - B158DRAFT_0250 0.77 -0.8
257,070 - B158DRAFT_0250 0.77 -0.9
257,070 - B158DRAFT_0250 0.77 -0.8
257,070 - B158DRAFT_0250 0.77 -0.7
257,070 - B158DRAFT_0250 0.77 +1.5
257,070 - B158DRAFT_0250 0.77 -1.3
257,070 - B158DRAFT_0250 0.77 -0.4
257,070 - B158DRAFT_0250 0.77 -1.4
257,070 - B158DRAFT_0250 0.77 -2.7
257,070 - B158DRAFT_0250 0.77 -0.6
257,070 - B158DRAFT_0250 0.77 -1.2
257,070 - B158DRAFT_0250 0.77 +0.3
257,070 - B158DRAFT_0250 0.77 -0.1
257,070 - B158DRAFT_0250 0.77 +2.9
257,070 - B158DRAFT_0250 0.77 -1.3
257,070 - B158DRAFT_0250 0.77 -0.2
257,070 - B158DRAFT_0250 0.77 -0.8
257,070 - B158DRAFT_0250 0.77 +0.1
257,070 - B158DRAFT_0250 0.77 -0.6
257,070 - B158DRAFT_0250 0.77 -0.6
257,070 - B158DRAFT_0250 0.77 +0.3
257,070 - B158DRAFT_0250 0.77 -1.1
257,070 - B158DRAFT_0250 0.77 -2.1
257,070 - B158DRAFT_0250 0.77 +0.4
257,070 - B158DRAFT_0250 0.77 -0.7
257,070 - B158DRAFT_0250 0.77 -1.1
257,070 - B158DRAFT_0250 0.77 +0.1
257,070 - B158DRAFT_0250 0.77 +0.0
257,070 - B158DRAFT_0250 0.77 -0.3
257,070 - B158DRAFT_0250 0.77 -1.4
257,070 - B158DRAFT_0250 0.77 +0.3
257,074 + B158DRAFT_0250 0.77 +1.8
257,082 - B158DRAFT_0250 0.78 +6.4
257,094 + B158DRAFT_0250 0.79 -0.8
257,136 + B158DRAFT_0250 0.83 +0.1
257,136 + B158DRAFT_0250 0.83 -0.1

Or see this region's nucleotide sequence