Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0219

Experiment: m.b. Paraquat dichloride 0.00390625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0218 and B158DRAFT_0219 are separated by 460 nucleotidesB158DRAFT_0219 and B158DRAFT_0220 are separated by 20 nucleotidesB158DRAFT_0220 and B158DRAFT_0221 are separated by 2 nucleotides B158DRAFT_0218: B158DRAFT_0218 - Site-specific recombinase XerD, at 222,384 to 223,640 _0218 B158DRAFT_0219: B158DRAFT_0219 - Membrane-bound serine protease (ClpP class), at 224,101 to 225,531 _0219 B158DRAFT_0220: B158DRAFT_0220 - Membrane protease subunits, stomatin/prohibitin homologs, at 225,552 to 226,295 _0220 B158DRAFT_0221: B158DRAFT_0221 - Protein of unknown function (DUF3224)., at 226,298 to 226,690 _0221 Position (kb) 224 225 226Strain fitness (log2 ratio) -2 -1 0 1 2 3at 223.126 kb on + strand, within B158DRAFT_0218at 223.171 kb on + strand, within B158DRAFT_0218at 223.171 kb on + strand, within B158DRAFT_0218at 223.201 kb on + strand, within B158DRAFT_0218at 223.262 kb on - strand, within B158DRAFT_0218at 223.289 kb on + strand, within B158DRAFT_0218at 223.319 kb on + strand, within B158DRAFT_0218at 223.327 kb on - strand, within B158DRAFT_0218at 223.345 kb on - strand, within B158DRAFT_0218at 223.350 kb on - strand, within B158DRAFT_0218at 223.351 kb on - strand, within B158DRAFT_0218at 223.433 kb on + strand, within B158DRAFT_0218at 223.443 kb on + strand, within B158DRAFT_0218at 223.451 kb on - strand, within B158DRAFT_0218at 223.463 kb on + strand, within B158DRAFT_0218at 223.463 kb on + strand, within B158DRAFT_0218at 223.465 kb on - strand, within B158DRAFT_0218at 223.570 kb on - strandat 223.597 kb on + strandat 223.597 kb on + strandat 223.605 kb on - strandat 223.607 kb on + strandat 223.615 kb on - strandat 223.638 kb on - strandat 223.650 kb on - strandat 223.976 kb on - strandat 223.993 kb on - strandat 223.993 kb on - strandat 224.029 kb on + strandat 224.029 kb on + strandat 224.053 kb on + strandat 224.061 kb on - strandat 224.070 kb on + strandat 224.078 kb on - strandat 224.103 kb on + strandat 224.110 kb on + strandat 224.147 kb on + strandat 224.168 kb on - strandat 224.207 kb on + strandat 224.236 kb on + strandat 224.272 kb on + strand, within B158DRAFT_0219at 224.284 kb on - strand, within B158DRAFT_0219at 224.312 kb on - strand, within B158DRAFT_0219at 224.312 kb on - strand, within B158DRAFT_0219at 224.358 kb on + strand, within B158DRAFT_0219at 224.391 kb on - strand, within B158DRAFT_0219at 224.423 kb on + strand, within B158DRAFT_0219at 224.464 kb on + strand, within B158DRAFT_0219at 224.472 kb on - strand, within B158DRAFT_0219at 224.480 kb on - strand, within B158DRAFT_0219at 224.526 kb on + strand, within B158DRAFT_0219at 224.548 kb on - strand, within B158DRAFT_0219at 224.673 kb on + strand, within B158DRAFT_0219at 224.718 kb on + strand, within B158DRAFT_0219at 224.726 kb on - strand, within B158DRAFT_0219at 224.737 kb on + strand, within B158DRAFT_0219at 224.738 kb on - strand, within B158DRAFT_0219at 224.745 kb on - strand, within B158DRAFT_0219at 224.811 kb on - strand, within B158DRAFT_0219at 224.882 kb on + strand, within B158DRAFT_0219at 224.882 kb on + strand, within B158DRAFT_0219at 224.882 kb on + strand, within B158DRAFT_0219at 224.882 kb on + strand, within B158DRAFT_0219at 224.883 kb on - strand, within B158DRAFT_0219at 224.890 kb on - strand, within B158DRAFT_0219at 224.890 kb on - strand, within B158DRAFT_0219at 224.961 kb on - strand, within B158DRAFT_0219at 225.001 kb on - strand, within B158DRAFT_0219at 225.109 kb on + strand, within B158DRAFT_0219at 225.109 kb on + strand, within B158DRAFT_0219at 225.109 kb on + strand, within B158DRAFT_0219at 225.117 kb on - strand, within B158DRAFT_0219at 225.179 kb on + strand, within B158DRAFT_0219at 225.179 kb on + strand, within B158DRAFT_0219at 225.180 kb on - strand, within B158DRAFT_0219at 225.187 kb on - strand, within B158DRAFT_0219at 225.239 kb on + strand, within B158DRAFT_0219at 225.269 kb on + strand, within B158DRAFT_0219at 225.269 kb on + strand, within B158DRAFT_0219at 225.269 kb on + strand, within B158DRAFT_0219at 225.277 kb on - strand, within B158DRAFT_0219at 225.282 kb on - strand, within B158DRAFT_0219at 225.296 kb on + strand, within B158DRAFT_0219at 225.296 kb on + strand, within B158DRAFT_0219at 225.304 kb on - strand, within B158DRAFT_0219at 225.306 kb on - strand, within B158DRAFT_0219at 225.349 kb on - strand, within B158DRAFT_0219at 225.393 kb on - strandat 225.449 kb on - strandat 225.451 kb on + strandat 225.526 kb on - strandat 225.616 kb on - strandat 226.081 kb on - strand, within B158DRAFT_0220at 226.081 kb on - strand, within B158DRAFT_0220at 226.118 kb on + strand, within B158DRAFT_0220

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.00390625 mg/ml
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223,126 + B158DRAFT_0218 0.59 -0.7
223,171 + B158DRAFT_0218 0.63 -0.9
223,171 + B158DRAFT_0218 0.63 -0.4
223,201 + B158DRAFT_0218 0.65 -0.7
223,262 - B158DRAFT_0218 0.70 +0.2
223,289 + B158DRAFT_0218 0.72 +1.8
223,319 + B158DRAFT_0218 0.74 +0.7
223,327 - B158DRAFT_0218 0.75 -0.7
223,345 - B158DRAFT_0218 0.76 +0.6
223,350 - B158DRAFT_0218 0.77 -0.0
223,351 - B158DRAFT_0218 0.77 +0.3
223,433 + B158DRAFT_0218 0.83 +0.5
223,443 + B158DRAFT_0218 0.84 +0.3
223,451 - B158DRAFT_0218 0.85 -1.5
223,463 + B158DRAFT_0218 0.86 +0.3
223,463 + B158DRAFT_0218 0.86 -0.4
223,465 - B158DRAFT_0218 0.86 -0.5
223,570 - -0.1
223,597 + +0.3
223,597 + -0.2
223,605 - -0.7
223,607 + -1.2
223,615 - -0.5
223,638 - -0.5
223,650 - +2.4
223,976 - -0.4
223,993 - -0.4
223,993 - +1.3
224,029 + -0.3
224,029 + +1.3
224,053 + -1.2
224,061 - -0.9
224,070 + +0.4
224,078 - +0.5
224,103 + -0.1
224,110 + -0.4
224,147 + -0.6
224,168 - -0.6
224,207 + -0.4
224,236 + -0.7
224,272 + B158DRAFT_0219 0.12 +0.4
224,284 - B158DRAFT_0219 0.13 +3.7
224,312 - B158DRAFT_0219 0.15 +0.8
224,312 - B158DRAFT_0219 0.15 -0.2
224,358 + B158DRAFT_0219 0.18 -0.5
224,391 - B158DRAFT_0219 0.20 -0.6
224,423 + B158DRAFT_0219 0.23 +0.5
224,464 + B158DRAFT_0219 0.25 -0.4
224,472 - B158DRAFT_0219 0.26 +0.3
224,480 - B158DRAFT_0219 0.26 -0.1
224,526 + B158DRAFT_0219 0.30 -1.8
224,548 - B158DRAFT_0219 0.31 -0.5
224,673 + B158DRAFT_0219 0.40 +0.1
224,718 + B158DRAFT_0219 0.43 -0.8
224,726 - B158DRAFT_0219 0.44 +1.8
224,737 + B158DRAFT_0219 0.44 +0.0
224,738 - B158DRAFT_0219 0.45 -0.0
224,745 - B158DRAFT_0219 0.45 -0.7
224,811 - B158DRAFT_0219 0.50 -0.1
224,882 + B158DRAFT_0219 0.55 -0.4
224,882 + B158DRAFT_0219 0.55 -0.6
224,882 + B158DRAFT_0219 0.55 -0.2
224,882 + B158DRAFT_0219 0.55 +2.4
224,883 - B158DRAFT_0219 0.55 +0.3
224,890 - B158DRAFT_0219 0.55 -0.9
224,890 - B158DRAFT_0219 0.55 -0.5
224,961 - B158DRAFT_0219 0.60 -0.2
225,001 - B158DRAFT_0219 0.63 -0.6
225,109 + B158DRAFT_0219 0.70 -0.5
225,109 + B158DRAFT_0219 0.70 -1.3
225,109 + B158DRAFT_0219 0.70 +0.7
225,117 - B158DRAFT_0219 0.71 -1.2
225,179 + B158DRAFT_0219 0.75 +0.0
225,179 + B158DRAFT_0219 0.75 -0.9
225,180 - B158DRAFT_0219 0.75 -0.0
225,187 - B158DRAFT_0219 0.76 -0.3
225,239 + B158DRAFT_0219 0.80 -0.5
225,269 + B158DRAFT_0219 0.82 +0.3
225,269 + B158DRAFT_0219 0.82 +0.1
225,269 + B158DRAFT_0219 0.82 +0.5
225,277 - B158DRAFT_0219 0.82 -0.1
225,282 - B158DRAFT_0219 0.83 -0.2
225,296 + B158DRAFT_0219 0.84 -1.3
225,296 + B158DRAFT_0219 0.84 -0.0
225,304 - B158DRAFT_0219 0.84 -0.0
225,306 - B158DRAFT_0219 0.84 +0.7
225,349 - B158DRAFT_0219 0.87 +0.5
225,393 - +0.4
225,449 - -0.4
225,451 + +2.5
225,526 - +0.0
225,616 - -1.0
226,081 - B158DRAFT_0220 0.71 -0.3
226,081 - B158DRAFT_0220 0.71 +0.9
226,118 + B158DRAFT_0220 0.76 -0.6

Or see this region's nucleotide sequence