Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0200

Experiment: m.b. Paraquat dichloride 0.00390625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0198 and B158DRAFT_0199 are separated by 146 nucleotidesB158DRAFT_0199 and B158DRAFT_0200 are separated by 114 nucleotidesB158DRAFT_0200 and B158DRAFT_0201 are separated by 5 nucleotides B158DRAFT_0198: B158DRAFT_0198 - Predicted integral membrane protein, at 203,969 to 204,556 _0198 B158DRAFT_0199: B158DRAFT_0199 - hypothetical protein, at 204,703 to 205,152 _0199 B158DRAFT_0200: B158DRAFT_0200 - non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family, at 205,267 to 205,899 _0200 B158DRAFT_0201: B158DRAFT_0201 - coproporphyrinogen III oxidase, anaerobic (EC 1.3.99.22), at 205,905 to 207,137 _0201 Position (kb) 205 206Strain fitness (log2 ratio) -2 -1 0 1 2at 204.290 kb on - strand, within B158DRAFT_0198at 204.304 kb on + strand, within B158DRAFT_0198at 204.379 kb on + strand, within B158DRAFT_0198at 204.384 kb on + strand, within B158DRAFT_0198at 204.389 kb on + strand, within B158DRAFT_0198at 204.529 kb on - strandat 204.529 kb on - strandat 204.618 kb on - strandat 204.640 kb on + strandat 204.642 kb on - strandat 204.713 kb on - strandat 204.730 kb on - strandat 204.759 kb on + strand, within B158DRAFT_0199at 204.759 kb on + strand, within B158DRAFT_0199at 204.825 kb on - strand, within B158DRAFT_0199at 204.957 kb on + strand, within B158DRAFT_0199at 204.968 kb on + strand, within B158DRAFT_0199at 205.058 kb on - strand, within B158DRAFT_0199at 205.085 kb on + strand, within B158DRAFT_0199at 205.085 kb on + strand, within B158DRAFT_0199at 205.093 kb on - strand, within B158DRAFT_0199at 205.093 kb on - strand, within B158DRAFT_0199at 205.334 kb on + strand, within B158DRAFT_0200at 205.342 kb on - strand, within B158DRAFT_0200at 205.373 kb on + strand, within B158DRAFT_0200at 205.400 kb on + strand, within B158DRAFT_0200at 205.444 kb on - strand, within B158DRAFT_0200at 205.465 kb on + strand, within B158DRAFT_0200at 205.488 kb on + strand, within B158DRAFT_0200at 205.494 kb on + strand, within B158DRAFT_0200at 205.494 kb on + strand, within B158DRAFT_0200at 205.512 kb on + strand, within B158DRAFT_0200at 205.520 kb on - strand, within B158DRAFT_0200at 205.557 kb on + strand, within B158DRAFT_0200at 205.560 kb on - strand, within B158DRAFT_0200at 205.560 kb on - strand, within B158DRAFT_0200at 205.565 kb on - strand, within B158DRAFT_0200at 205.565 kb on - strand, within B158DRAFT_0200at 205.565 kb on - strand, within B158DRAFT_0200at 205.602 kb on + strand, within B158DRAFT_0200at 205.603 kb on + strand, within B158DRAFT_0200at 205.610 kb on - strand, within B158DRAFT_0200at 205.610 kb on - strand, within B158DRAFT_0200at 205.635 kb on - strand, within B158DRAFT_0200at 205.703 kb on + strand, within B158DRAFT_0200at 205.711 kb on - strand, within B158DRAFT_0200at 205.711 kb on - strand, within B158DRAFT_0200at 205.734 kb on - strand, within B158DRAFT_0200at 205.795 kb on + strand, within B158DRAFT_0200at 205.803 kb on - strand, within B158DRAFT_0200at 205.803 kb on - strand, within B158DRAFT_0200at 205.803 kb on - strand, within B158DRAFT_0200at 205.848 kb on + strandat 205.928 kb on - strandat 205.934 kb on - strandat 205.934 kb on - strandat 206.004 kb on - strandat 206.004 kb on - strandat 206.034 kb on - strand, within B158DRAFT_0201at 206.034 kb on - strand, within B158DRAFT_0201at 206.036 kb on + strand, within B158DRAFT_0201at 206.036 kb on + strand, within B158DRAFT_0201at 206.036 kb on + strand, within B158DRAFT_0201at 206.036 kb on + strand, within B158DRAFT_0201at 206.036 kb on + strand, within B158DRAFT_0201at 206.036 kb on + strand, within B158DRAFT_0201at 206.044 kb on - strand, within B158DRAFT_0201at 206.044 kb on - strand, within B158DRAFT_0201at 206.044 kb on - strand, within B158DRAFT_0201at 206.044 kb on - strand, within B158DRAFT_0201at 206.092 kb on + strand, within B158DRAFT_0201at 206.159 kb on - strand, within B158DRAFT_0201at 206.173 kb on - strand, within B158DRAFT_0201at 206.173 kb on - strand, within B158DRAFT_0201at 206.173 kb on - strand, within B158DRAFT_0201at 206.173 kb on - strand, within B158DRAFT_0201at 206.173 kb on - strand, within B158DRAFT_0201at 206.200 kb on - strand, within B158DRAFT_0201at 206.236 kb on + strand, within B158DRAFT_0201at 206.288 kb on + strand, within B158DRAFT_0201at 206.295 kb on + strand, within B158DRAFT_0201at 206.295 kb on + strand, within B158DRAFT_0201at 206.298 kb on + strand, within B158DRAFT_0201at 206.298 kb on + strand, within B158DRAFT_0201at 206.303 kb on - strand, within B158DRAFT_0201at 206.336 kb on - strand, within B158DRAFT_0201at 206.342 kb on + strand, within B158DRAFT_0201at 206.342 kb on + strand, within B158DRAFT_0201at 206.347 kb on + strand, within B158DRAFT_0201at 206.350 kb on - strand, within B158DRAFT_0201at 206.350 kb on - strand, within B158DRAFT_0201at 206.350 kb on - strand, within B158DRAFT_0201at 206.409 kb on - strand, within B158DRAFT_0201at 206.515 kb on + strand, within B158DRAFT_0201at 206.523 kb on - strand, within B158DRAFT_0201at 206.523 kb on - strand, within B158DRAFT_0201at 206.578 kb on + strand, within B158DRAFT_0201at 206.583 kb on + strand, within B158DRAFT_0201at 206.602 kb on - strand, within B158DRAFT_0201at 206.628 kb on - strand, within B158DRAFT_0201at 206.628 kb on - strand, within B158DRAFT_0201at 206.628 kb on - strand, within B158DRAFT_0201at 206.658 kb on + strand, within B158DRAFT_0201at 206.658 kb on + strand, within B158DRAFT_0201at 206.664 kb on - strand, within B158DRAFT_0201at 206.704 kb on - strand, within B158DRAFT_0201at 206.751 kb on + strand, within B158DRAFT_0201at 206.762 kb on + strand, within B158DRAFT_0201at 206.764 kb on - strand, within B158DRAFT_0201at 206.891 kb on + strand, within B158DRAFT_0201at 206.891 kb on + strand, within B158DRAFT_0201

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.00390625 mg/ml
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204,290 - B158DRAFT_0198 0.55 +0.1
204,304 + B158DRAFT_0198 0.57 -1.2
204,379 + B158DRAFT_0198 0.70 -0.8
204,384 + B158DRAFT_0198 0.71 -1.1
204,389 + B158DRAFT_0198 0.71 -0.6
204,529 - +0.1
204,529 - -0.5
204,618 - -0.8
204,640 + -1.0
204,642 - -0.1
204,713 - +0.4
204,730 - -1.4
204,759 + B158DRAFT_0199 0.12 -0.5
204,759 + B158DRAFT_0199 0.12 -0.1
204,825 - B158DRAFT_0199 0.27 -0.4
204,957 + B158DRAFT_0199 0.56 +0.3
204,968 + B158DRAFT_0199 0.59 +1.4
205,058 - B158DRAFT_0199 0.79 +0.3
205,085 + B158DRAFT_0199 0.85 -1.4
205,085 + B158DRAFT_0199 0.85 -0.5
205,093 - B158DRAFT_0199 0.87 -0.6
205,093 - B158DRAFT_0199 0.87 -0.5
205,334 + B158DRAFT_0200 0.11 +0.0
205,342 - B158DRAFT_0200 0.12 -0.9
205,373 + B158DRAFT_0200 0.17 +0.6
205,400 + B158DRAFT_0200 0.21 -0.6
205,444 - B158DRAFT_0200 0.28 -0.4
205,465 + B158DRAFT_0200 0.31 -0.9
205,488 + B158DRAFT_0200 0.35 -0.4
205,494 + B158DRAFT_0200 0.36 +0.2
205,494 + B158DRAFT_0200 0.36 +0.1
205,512 + B158DRAFT_0200 0.39 +0.3
205,520 - B158DRAFT_0200 0.40 +0.2
205,557 + B158DRAFT_0200 0.46 -0.9
205,560 - B158DRAFT_0200 0.46 -0.7
205,560 - B158DRAFT_0200 0.46 -1.2
205,565 - B158DRAFT_0200 0.47 -0.5
205,565 - B158DRAFT_0200 0.47 +0.0
205,565 - B158DRAFT_0200 0.47 -1.3
205,602 + B158DRAFT_0200 0.53 -1.1
205,603 + B158DRAFT_0200 0.53 +0.0
205,610 - B158DRAFT_0200 0.54 +1.4
205,610 - B158DRAFT_0200 0.54 +0.6
205,635 - B158DRAFT_0200 0.58 +1.0
205,703 + B158DRAFT_0200 0.69 -1.2
205,711 - B158DRAFT_0200 0.70 +0.7
205,711 - B158DRAFT_0200 0.70 -0.2
205,734 - B158DRAFT_0200 0.74 -0.6
205,795 + B158DRAFT_0200 0.83 -0.5
205,803 - B158DRAFT_0200 0.85 -0.1
205,803 - B158DRAFT_0200 0.85 -0.3
205,803 - B158DRAFT_0200 0.85 -0.2
205,848 + +0.7
205,928 - -0.5
205,934 - -0.0
205,934 - +0.1
206,004 - +0.3
206,004 - -1.0
206,034 - B158DRAFT_0201 0.10 -0.1
206,034 - B158DRAFT_0201 0.10 +0.9
206,036 + B158DRAFT_0201 0.11 +0.3
206,036 + B158DRAFT_0201 0.11 -0.3
206,036 + B158DRAFT_0201 0.11 -0.4
206,036 + B158DRAFT_0201 0.11 -1.1
206,036 + B158DRAFT_0201 0.11 -0.4
206,036 + B158DRAFT_0201 0.11 +1.2
206,044 - B158DRAFT_0201 0.11 +0.1
206,044 - B158DRAFT_0201 0.11 -0.3
206,044 - B158DRAFT_0201 0.11 +0.6
206,044 - B158DRAFT_0201 0.11 -0.1
206,092 + B158DRAFT_0201 0.15 +0.1
206,159 - B158DRAFT_0201 0.21 +0.3
206,173 - B158DRAFT_0201 0.22 -0.2
206,173 - B158DRAFT_0201 0.22 -0.4
206,173 - B158DRAFT_0201 0.22 -0.7
206,173 - B158DRAFT_0201 0.22 -1.9
206,173 - B158DRAFT_0201 0.22 -0.7
206,200 - B158DRAFT_0201 0.24 -0.8
206,236 + B158DRAFT_0201 0.27 +0.1
206,288 + B158DRAFT_0201 0.31 +0.2
206,295 + B158DRAFT_0201 0.32 +0.5
206,295 + B158DRAFT_0201 0.32 -0.4
206,298 + B158DRAFT_0201 0.32 +0.3
206,298 + B158DRAFT_0201 0.32 -0.4
206,303 - B158DRAFT_0201 0.32 -0.8
206,336 - B158DRAFT_0201 0.35 -0.2
206,342 + B158DRAFT_0201 0.35 +0.3
206,342 + B158DRAFT_0201 0.35 -0.5
206,347 + B158DRAFT_0201 0.36 +2.2
206,350 - B158DRAFT_0201 0.36 -0.1
206,350 - B158DRAFT_0201 0.36 +1.1
206,350 - B158DRAFT_0201 0.36 -0.5
206,409 - B158DRAFT_0201 0.41 -0.4
206,515 + B158DRAFT_0201 0.49 -1.9
206,523 - B158DRAFT_0201 0.50 +0.1
206,523 - B158DRAFT_0201 0.50 -0.4
206,578 + B158DRAFT_0201 0.55 +0.2
206,583 + B158DRAFT_0201 0.55 +0.2
206,602 - B158DRAFT_0201 0.57 -0.6
206,628 - B158DRAFT_0201 0.59 +0.2
206,628 - B158DRAFT_0201 0.59 -0.8
206,628 - B158DRAFT_0201 0.59 -1.2
206,658 + B158DRAFT_0201 0.61 -0.2
206,658 + B158DRAFT_0201 0.61 +1.4
206,664 - B158DRAFT_0201 0.62 -0.1
206,704 - B158DRAFT_0201 0.65 +1.8
206,751 + B158DRAFT_0201 0.69 -0.2
206,762 + B158DRAFT_0201 0.70 +0.4
206,764 - B158DRAFT_0201 0.70 -1.3
206,891 + B158DRAFT_0201 0.80 -1.2
206,891 + B158DRAFT_0201 0.80 +0.1

Or see this region's nucleotide sequence