Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0076

Experiment: m.b. Paraquat dichloride 0.00390625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0075 and B158DRAFT_0076 are separated by 6 nucleotidesB158DRAFT_0076 and B158DRAFT_0077 are separated by 15 nucleotidesB158DRAFT_0077 and B158DRAFT_0078 overlap by 4 nucleotides B158DRAFT_0075: B158DRAFT_0075 - lipoate synthase, at 70,882 to 71,907 _0075 B158DRAFT_0076: B158DRAFT_0076 - lipoate-protein ligase B, at 71,914 to 72,588 _0076 B158DRAFT_0077: B158DRAFT_0077 - Uncharacterized conserved protein, at 72,604 to 72,873 _0077 B158DRAFT_0078: B158DRAFT_0078 - Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase, at 72,870 to 73,769 _0078 Position (kb) 71 72 73Strain fitness (log2 ratio) -1 0 1 2 3 4 5at 72.921 kb on - strandat 72.933 kb on - strandat 73.065 kb on - strand, within B158DRAFT_0078at 73.085 kb on + strand, within B158DRAFT_0078at 73.107 kb on + strand, within B158DRAFT_0078at 73.107 kb on + strand, within B158DRAFT_0078at 73.107 kb on + strand, within B158DRAFT_0078at 73.107 kb on + strand, within B158DRAFT_0078at 73.206 kb on + strand, within B158DRAFT_0078at 73.223 kb on + strand, within B158DRAFT_0078at 73.234 kb on + strand, within B158DRAFT_0078at 73.248 kb on - strand, within B158DRAFT_0078at 73.269 kb on + strand, within B158DRAFT_0078at 73.305 kb on - strand, within B158DRAFT_0078at 73.319 kb on - strand, within B158DRAFT_0078at 73.389 kb on + strand, within B158DRAFT_0078at 73.399 kb on + strand, within B158DRAFT_0078at 73.471 kb on + strand, within B158DRAFT_0078at 73.486 kb on - strand, within B158DRAFT_0078at 73.535 kb on - strand, within B158DRAFT_0078at 73.535 kb on - strand, within B158DRAFT_0078at 73.535 kb on - strand, within B158DRAFT_0078at 73.566 kb on - strand, within B158DRAFT_0078at 73.580 kb on - strand, within B158DRAFT_0078at 73.580 kb on - strand, within B158DRAFT_0078

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.00390625 mg/ml
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72,921 - -0.6
72,933 - -0.7
73,065 - B158DRAFT_0078 0.22 -1.2
73,085 + B158DRAFT_0078 0.24 -0.8
73,107 + B158DRAFT_0078 0.26 +0.2
73,107 + B158DRAFT_0078 0.26 -0.9
73,107 + B158DRAFT_0078 0.26 +0.5
73,107 + B158DRAFT_0078 0.26 -0.0
73,206 + B158DRAFT_0078 0.37 -0.1
73,223 + B158DRAFT_0078 0.39 +1.2
73,234 + B158DRAFT_0078 0.40 +0.2
73,248 - B158DRAFT_0078 0.42 -0.2
73,269 + B158DRAFT_0078 0.44 +4.8
73,305 - B158DRAFT_0078 0.48 -0.7
73,319 - B158DRAFT_0078 0.50 +0.4
73,389 + B158DRAFT_0078 0.58 +0.1
73,399 + B158DRAFT_0078 0.59 -0.4
73,471 + B158DRAFT_0078 0.67 -0.6
73,486 - B158DRAFT_0078 0.68 -0.5
73,535 - B158DRAFT_0078 0.74 +0.6
73,535 - B158DRAFT_0078 0.74 +0.3
73,535 - B158DRAFT_0078 0.74 +0.1
73,566 - B158DRAFT_0078 0.77 +1.4
73,580 - B158DRAFT_0078 0.79 -0.3
73,580 - B158DRAFT_0078 0.79 -0.8

Or see this region's nucleotide sequence