Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0039

Experiment: m.b. Paraquat dichloride 0.00390625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0038 and B158DRAFT_0039 are separated by 61 nucleotidesB158DRAFT_0039 and B158DRAFT_0040 are separated by 29 nucleotides B158DRAFT_0038: B158DRAFT_0038 - penicillin-binding protein 1B, at 36,913 to 39,234 _0038 B158DRAFT_0039: B158DRAFT_0039 - 2'-5' RNA ligase, at 39,296 to 39,877 _0039 B158DRAFT_0040: B158DRAFT_0040 - diguanylate cyclase (GGDEF) domain, at 39,907 to 41,715 _0040 Position (kb) 39 40Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 38.342 kb on + strand, within B158DRAFT_0038at 38.535 kb on + strand, within B158DRAFT_0038at 38.572 kb on - strand, within B158DRAFT_0038at 38.612 kb on + strand, within B158DRAFT_0038at 38.615 kb on - strand, within B158DRAFT_0038at 38.620 kb on - strand, within B158DRAFT_0038at 38.620 kb on - strand, within B158DRAFT_0038at 38.647 kb on + strand, within B158DRAFT_0038at 38.717 kb on + strand, within B158DRAFT_0038at 38.717 kb on + strand, within B158DRAFT_0038at 38.725 kb on - strand, within B158DRAFT_0038at 38.742 kb on + strand, within B158DRAFT_0038at 38.750 kb on - strand, within B158DRAFT_0038at 38.768 kb on - strand, within B158DRAFT_0038at 38.804 kb on + strand, within B158DRAFT_0038at 38.814 kb on + strand, within B158DRAFT_0038at 38.814 kb on + strand, within B158DRAFT_0038at 38.814 kb on + strand, within B158DRAFT_0038at 38.814 kb on + strand, within B158DRAFT_0038at 38.814 kb on + strand, within B158DRAFT_0038at 38.814 kb on + strand, within B158DRAFT_0038at 38.814 kb on + strand, within B158DRAFT_0038at 38.814 kb on + strand, within B158DRAFT_0038at 38.822 kb on - strand, within B158DRAFT_0038at 38.822 kb on - strand, within B158DRAFT_0038at 38.822 kb on - strand, within B158DRAFT_0038at 38.822 kb on - strand, within B158DRAFT_0038at 38.822 kb on - strand, within B158DRAFT_0038at 38.822 kb on - strand, within B158DRAFT_0038at 38.823 kb on - strand, within B158DRAFT_0038at 38.827 kb on + strand, within B158DRAFT_0038at 38.845 kb on - strand, within B158DRAFT_0038at 38.871 kb on + strand, within B158DRAFT_0038at 38.957 kb on - strand, within B158DRAFT_0038at 38.969 kb on - strand, within B158DRAFT_0038at 39.063 kb on + strandat 39.063 kb on + strandat 39.120 kb on - strandat 39.332 kb on + strandat 39.353 kb on - strandat 39.443 kb on + strand, within B158DRAFT_0039at 39.500 kb on + strand, within B158DRAFT_0039at 39.500 kb on + strand, within B158DRAFT_0039at 39.521 kb on - strand, within B158DRAFT_0039at 39.697 kb on + strand, within B158DRAFT_0039at 39.697 kb on + strand, within B158DRAFT_0039at 39.697 kb on + strand, within B158DRAFT_0039at 39.705 kb on - strand, within B158DRAFT_0039at 39.705 kb on - strand, within B158DRAFT_0039at 39.705 kb on - strand, within B158DRAFT_0039at 39.705 kb on - strand, within B158DRAFT_0039at 39.705 kb on - strand, within B158DRAFT_0039at 39.705 kb on - strand, within B158DRAFT_0039at 39.763 kb on - strand, within B158DRAFT_0039at 39.891 kb on + strandat 39.936 kb on - strandat 39.985 kb on + strandat 39.985 kb on + strandat 39.985 kb on + strandat 39.985 kb on + strandat 39.985 kb on + strandat 39.985 kb on + strandat 39.985 kb on + strandat 39.985 kb on + strandat 39.985 kb on + strandat 39.985 kb on + strandat 39.985 kb on + strandat 39.993 kb on - strandat 39.993 kb on - strandat 39.993 kb on - strandat 39.993 kb on - strandat 39.993 kb on - strandat 40.053 kb on + strandat 40.053 kb on + strandat 40.053 kb on + strandat 40.053 kb on + strandat 40.061 kb on - strandat 40.061 kb on - strandat 40.239 kb on + strand, within B158DRAFT_0040at 40.239 kb on + strand, within B158DRAFT_0040at 40.247 kb on - strand, within B158DRAFT_0040at 40.358 kb on - strand, within B158DRAFT_0040at 40.424 kb on - strand, within B158DRAFT_0040at 40.511 kb on + strand, within B158DRAFT_0040at 40.555 kb on - strand, within B158DRAFT_0040at 40.565 kb on - strand, within B158DRAFT_0040at 40.723 kb on + strand, within B158DRAFT_0040at 40.855 kb on - strand, within B158DRAFT_0040at 40.857 kb on + strand, within B158DRAFT_0040at 40.857 kb on + strand, within B158DRAFT_0040

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.00390625 mg/ml
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38,342 + B158DRAFT_0038 0.62 -0.2
38,535 + B158DRAFT_0038 0.70 -0.7
38,572 - B158DRAFT_0038 0.71 +0.2
38,612 + B158DRAFT_0038 0.73 +0.1
38,615 - B158DRAFT_0038 0.73 -0.3
38,620 - B158DRAFT_0038 0.74 +0.2
38,620 - B158DRAFT_0038 0.74 +0.6
38,647 + B158DRAFT_0038 0.75 -0.6
38,717 + B158DRAFT_0038 0.78 -0.5
38,717 + B158DRAFT_0038 0.78 -1.3
38,725 - B158DRAFT_0038 0.78 +0.3
38,742 + B158DRAFT_0038 0.79 -0.1
38,750 - B158DRAFT_0038 0.79 +0.7
38,768 - B158DRAFT_0038 0.80 -0.4
38,804 + B158DRAFT_0038 0.81 +0.5
38,814 + B158DRAFT_0038 0.82 +0.4
38,814 + B158DRAFT_0038 0.82 +2.0
38,814 + B158DRAFT_0038 0.82 -0.1
38,814 + B158DRAFT_0038 0.82 -0.3
38,814 + B158DRAFT_0038 0.82 -0.9
38,814 + B158DRAFT_0038 0.82 -0.8
38,814 + B158DRAFT_0038 0.82 -0.6
38,814 + B158DRAFT_0038 0.82 +1.8
38,822 - B158DRAFT_0038 0.82 -0.3
38,822 - B158DRAFT_0038 0.82 -0.3
38,822 - B158DRAFT_0038 0.82 -0.3
38,822 - B158DRAFT_0038 0.82 -0.8
38,822 - B158DRAFT_0038 0.82 -0.3
38,822 - B158DRAFT_0038 0.82 +0.2
38,823 - B158DRAFT_0038 0.82 +0.8
38,827 + B158DRAFT_0038 0.82 -1.1
38,845 - B158DRAFT_0038 0.83 -0.1
38,871 + B158DRAFT_0038 0.84 +0.6
38,957 - B158DRAFT_0038 0.88 +0.6
38,969 - B158DRAFT_0038 0.89 -1.0
39,063 + +4.1
39,063 + -0.6
39,120 - -1.0
39,332 + -0.5
39,353 - -0.0
39,443 + B158DRAFT_0039 0.25 -0.7
39,500 + B158DRAFT_0039 0.35 -0.3
39,500 + B158DRAFT_0039 0.35 +0.3
39,521 - B158DRAFT_0039 0.39 +0.8
39,697 + B158DRAFT_0039 0.69 +0.0
39,697 + B158DRAFT_0039 0.69 +1.2
39,697 + B158DRAFT_0039 0.69 +3.5
39,705 - B158DRAFT_0039 0.70 +0.0
39,705 - B158DRAFT_0039 0.70 +0.3
39,705 - B158DRAFT_0039 0.70 -0.5
39,705 - B158DRAFT_0039 0.70 +0.9
39,705 - B158DRAFT_0039 0.70 -0.4
39,705 - B158DRAFT_0039 0.70 +0.0
39,763 - B158DRAFT_0039 0.80 -0.1
39,891 + -2.2
39,936 - -0.1
39,985 + -0.6
39,985 + -0.5
39,985 + -0.0
39,985 + +0.0
39,985 + -0.7
39,985 + -0.7
39,985 + +1.6
39,985 + +0.9
39,985 + -0.2
39,985 + -1.6
39,985 + +0.1
39,993 - -0.7
39,993 - -0.7
39,993 - -1.1
39,993 - -0.0
39,993 - +1.1
40,053 + -0.9
40,053 + -0.7
40,053 + +0.2
40,053 + +0.4
40,061 - -0.5
40,061 - -0.2
40,239 + B158DRAFT_0040 0.18 +0.1
40,239 + B158DRAFT_0040 0.18 +0.6
40,247 - B158DRAFT_0040 0.19 -0.1
40,358 - B158DRAFT_0040 0.25 +0.0
40,424 - B158DRAFT_0040 0.29 +0.2
40,511 + B158DRAFT_0040 0.33 +0.2
40,555 - B158DRAFT_0040 0.36 -0.5
40,565 - B158DRAFT_0040 0.36 -0.6
40,723 + B158DRAFT_0040 0.45 -0.8
40,855 - B158DRAFT_0040 0.52 -0.1
40,857 + B158DRAFT_0040 0.53 -0.3
40,857 + B158DRAFT_0040 0.53 -0.2

Or see this region's nucleotide sequence