Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2351

Experiment: m.b. Paraquat dichloride 0.0078125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2350 and B158DRAFT_2351 are separated by 34 nucleotidesB158DRAFT_2351 and B158DRAFT_2352 are separated by 18 nucleotidesB158DRAFT_2352 and B158DRAFT_2353 are separated by 105 nucleotides B158DRAFT_2350: B158DRAFT_2350 - Capsule polysaccharide export protein, at 515,574 to 517,040 _2350 B158DRAFT_2351: B158DRAFT_2351 - UDP-N-acetylglucosamine 2-epimerase, at 517,075 to 518,196 _2351 B158DRAFT_2352: B158DRAFT_2352 - hypothetical protein, at 518,215 to 518,979 _2352 B158DRAFT_2353: B158DRAFT_2353 - nucleotide sugar dehydrogenase, at 519,085 to 520,347 _2353 Position (kb) 517 518 519Strain fitness (log2 ratio) -1 0 1 2 3 4 5 6 7at 517.187 kb on - strandat 517.466 kb on + strand, within B158DRAFT_2351at 517.785 kb on - strand, within B158DRAFT_2351at 518.093 kb on - strandat 518.250 kb on + strandat 518.382 kb on + strand, within B158DRAFT_2352at 518.987 kb on + strandat 519.125 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.0078125 mg/ml
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517,187 - +6.8
517,466 + B158DRAFT_2351 0.35 +6.6
517,785 - B158DRAFT_2351 0.63 +6.8
518,093 - +6.8
518,250 + -0.1
518,382 + B158DRAFT_2352 0.22 +0.7
518,987 + -0.3
519,125 - +6.7

Or see this region's nucleotide sequence