Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1773

Experiment: m.b. Paraquat dichloride 0.0078125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1771 and B158DRAFT_1772 are separated by 75 nucleotidesB158DRAFT_1772 and B158DRAFT_1773 are separated by 9 nucleotidesB158DRAFT_1773 and B158DRAFT_1774 are separated by 29 nucleotides B158DRAFT_1771: B158DRAFT_1771 - ribonuclease, Rne/Rng family, at 1,853,481 to 1,856,294 _1771 B158DRAFT_1772: B158DRAFT_1772 - Fructose-2,6-bisphosphatase, at 1,856,370 to 1,856,936 _1772 B158DRAFT_1773: B158DRAFT_1773 - DNA ligase, NAD-dependent, at 1,856,946 to 1,858,961 _1773 B158DRAFT_1774: B158DRAFT_1774 - cell division protein ZipA, at 1,858,991 to 1,860,016 _1774 Position (kb) 1856 1857 1858 1859Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 1856.051 kb on + strandat 1856.051 kb on + strandat 1856.059 kb on - strandat 1856.068 kb on + strandat 1856.179 kb on + strandat 1856.265 kb on + strandat 1856.302 kb on + strandat 1856.302 kb on + strandat 1856.497 kb on - strand, within B158DRAFT_1772at 1856.530 kb on + strand, within B158DRAFT_1772at 1856.542 kb on + strand, within B158DRAFT_1772at 1856.550 kb on - strand, within B158DRAFT_1772at 1856.596 kb on + strand, within B158DRAFT_1772at 1856.895 kb on + strandat 1859.186 kb on - strand, within B158DRAFT_1774at 1859.186 kb on - strand, within B158DRAFT_1774at 1859.186 kb on - strand, within B158DRAFT_1774at 1859.249 kb on - strand, within B158DRAFT_1774at 1859.250 kb on - strand, within B158DRAFT_1774at 1859.272 kb on - strand, within B158DRAFT_1774at 1859.378 kb on - strand, within B158DRAFT_1774at 1859.498 kb on - strand, within B158DRAFT_1774at 1859.498 kb on - strand, within B158DRAFT_1774at 1859.549 kb on - strand, within B158DRAFT_1774

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.0078125 mg/ml
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1,856,051 + -0.1
1,856,051 + -0.9
1,856,059 - -0.0
1,856,068 + +1.0
1,856,179 + +0.8
1,856,265 + -0.6
1,856,302 + -0.3
1,856,302 + -0.7
1,856,497 - B158DRAFT_1772 0.22 -0.1
1,856,530 + B158DRAFT_1772 0.28 +0.4
1,856,542 + B158DRAFT_1772 0.30 -0.1
1,856,550 - B158DRAFT_1772 0.32 -3.0
1,856,596 + B158DRAFT_1772 0.40 -0.1
1,856,895 + -0.1
1,859,186 - B158DRAFT_1774 0.19 +3.5
1,859,186 - B158DRAFT_1774 0.19 +4.4
1,859,186 - B158DRAFT_1774 0.19 +3.6
1,859,249 - B158DRAFT_1774 0.25 +2.2
1,859,250 - B158DRAFT_1774 0.25 +2.4
1,859,272 - B158DRAFT_1774 0.27 +3.7
1,859,378 - B158DRAFT_1774 0.38 +0.5
1,859,498 - B158DRAFT_1774 0.49 +2.4
1,859,498 - B158DRAFT_1774 0.49 +2.1
1,859,549 - B158DRAFT_1774 0.54 +3.2

Or see this region's nucleotide sequence