Experiment: m.b. Paraquat dichloride 0.0078125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1328 and B158DRAFT_1329 overlap by 11 nucleotides B158DRAFT_1329 and B158DRAFT_1330 overlap by 4 nucleotides B158DRAFT_1330 and B158DRAFT_1331 are separated by 3 nucleotides
B158DRAFT_1328: B158DRAFT_1328 - c-type cytochrome biogenesis protein CcmF, at 1,369,794 to 1,371,782
_1328
B158DRAFT_1329: B158DRAFT_1329 - periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily, at 1,371,772 to 1,372,338
_1329
B158DRAFT_1330: B158DRAFT_1330 - Uncharacterized protein involved in biosynthesis of c-type cytochromes, at 1,372,335 to 1,372,769
_1330
B158DRAFT_1331: B158DRAFT_1331 - Cytochrome c biogenesis factor, at 1,372,773 to 1,373,798
_1331
Position (kb)
1372
1373 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5
6 at 1371.501 kb on + strand, within B158DRAFT_1328 at 1371.510 kb on + strand, within B158DRAFT_1328 at 1371.511 kb on - strand, within B158DRAFT_1328 at 1371.587 kb on + strand at 1371.661 kb on + strand at 1371.797 kb on + strand at 1371.805 kb on - strand at 1371.828 kb on + strand at 1371.924 kb on + strand, within B158DRAFT_1329 at 1371.931 kb on + strand, within B158DRAFT_1329 at 1371.949 kb on + strand, within B158DRAFT_1329 at 1371.957 kb on - strand, within B158DRAFT_1329 at 1371.957 kb on - strand, within B158DRAFT_1329 at 1372.163 kb on - strand, within B158DRAFT_1329 at 1372.191 kb on - strand, within B158DRAFT_1329 at 1372.350 kb on + strand at 1372.603 kb on + strand, within B158DRAFT_1330 at 1372.611 kb on - strand, within B158DRAFT_1330 at 1372.723 kb on + strand, within B158DRAFT_1330 at 1372.767 kb on - strand at 1372.796 kb on - strand at 1372.808 kb on + strand at 1372.816 kb on - strand at 1372.816 kb on - strand at 1372.951 kb on + strand, within B158DRAFT_1331 at 1373.100 kb on + strand, within B158DRAFT_1331 at 1373.108 kb on - strand, within B158DRAFT_1331 at 1373.134 kb on + strand, within B158DRAFT_1331 at 1373.164 kb on + strand, within B158DRAFT_1331 at 1373.259 kb on + strand, within B158DRAFT_1331 at 1373.269 kb on + strand, within B158DRAFT_1331 at 1373.279 kb on + strand, within B158DRAFT_1331 at 1373.319 kb on - strand, within B158DRAFT_1331 at 1373.405 kb on + strand, within B158DRAFT_1331 at 1373.405 kb on + strand, within B158DRAFT_1331 at 1373.405 kb on + strand, within B158DRAFT_1331 at 1373.405 kb on + strand, within B158DRAFT_1331 at 1373.413 kb on - strand, within B158DRAFT_1331 at 1373.413 kb on - strand, within B158DRAFT_1331 at 1373.413 kb on - strand, within B158DRAFT_1331 at 1373.413 kb on - strand, within B158DRAFT_1331 at 1373.413 kb on - strand, within B158DRAFT_1331 at 1373.437 kb on - strand, within B158DRAFT_1331 at 1373.520 kb on + strand, within B158DRAFT_1331 at 1373.537 kb on + strand, within B158DRAFT_1331 at 1373.542 kb on + strand, within B158DRAFT_1331 at 1373.552 kb on + strand, within B158DRAFT_1331 at 1373.572 kb on + strand, within B158DRAFT_1331 at 1373.572 kb on + strand, within B158DRAFT_1331 at 1373.588 kb on + strand, within B158DRAFT_1331 at 1373.596 kb on - strand, within B158DRAFT_1331 at 1373.611 kb on + strand, within B158DRAFT_1331 at 1373.611 kb on + strand, within B158DRAFT_1331 at 1373.611 kb on + strand, within B158DRAFT_1331 at 1373.622 kb on - strand, within B158DRAFT_1331 at 1373.634 kb on + strand, within B158DRAFT_1331 at 1373.675 kb on - strand, within B158DRAFT_1331 at 1373.692 kb on + strand, within B158DRAFT_1331 at 1373.692 kb on + strand, within B158DRAFT_1331 at 1373.692 kb on + strand, within B158DRAFT_1331 at 1373.692 kb on + strand, within B158DRAFT_1331 at 1373.700 kb on - strand at 1373.700 kb on - strand at 1373.700 kb on - strand at 1373.700 kb on - strand at 1373.702 kb on + strand at 1373.715 kb on - strand at 1373.755 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.0078125 mg/ml remove 1,371,501 + B158DRAFT_1328 0.86 +4.2 1,371,510 + B158DRAFT_1328 0.86 +3.4 1,371,511 - B158DRAFT_1328 0.86 +4.0 1,371,587 + +5.9 1,371,661 + +3.6 1,371,797 + +3.3 1,371,805 - +3.4 1,371,828 + +2.4 1,371,924 + B158DRAFT_1329 0.27 +3.0 1,371,931 + B158DRAFT_1329 0.28 +3.5 1,371,949 + B158DRAFT_1329 0.31 +3.6 1,371,957 - B158DRAFT_1329 0.33 +2.7 1,371,957 - B158DRAFT_1329 0.33 +3.6 1,372,163 - B158DRAFT_1329 0.69 +3.7 1,372,191 - B158DRAFT_1329 0.74 +3.5 1,372,350 + +3.7 1,372,603 + B158DRAFT_1330 0.62 +3.9 1,372,611 - B158DRAFT_1330 0.63 +4.1 1,372,723 + B158DRAFT_1330 0.89 +1.5 1,372,767 - +3.3 1,372,796 - +3.2 1,372,808 + +2.7 1,372,816 - +3.2 1,372,816 - +3.2 1,372,951 + B158DRAFT_1331 0.17 +2.2 1,373,100 + B158DRAFT_1331 0.32 +3.4 1,373,108 - B158DRAFT_1331 0.33 +2.8 1,373,134 + B158DRAFT_1331 0.35 +2.1 1,373,164 + B158DRAFT_1331 0.38 +2.5 1,373,259 + B158DRAFT_1331 0.47 +3.4 1,373,269 + B158DRAFT_1331 0.48 +2.7 1,373,279 + B158DRAFT_1331 0.49 +0.6 1,373,319 - B158DRAFT_1331 0.53 +2.7 1,373,405 + B158DRAFT_1331 0.62 +0.0 1,373,405 + B158DRAFT_1331 0.62 +0.9 1,373,405 + B158DRAFT_1331 0.62 +0.4 1,373,405 + B158DRAFT_1331 0.62 +0.2 1,373,413 - B158DRAFT_1331 0.62 -0.6 1,373,413 - B158DRAFT_1331 0.62 +1.7 1,373,413 - B158DRAFT_1331 0.62 +0.1 1,373,413 - B158DRAFT_1331 0.62 +1.0 1,373,413 - B158DRAFT_1331 0.62 +0.5 1,373,437 - B158DRAFT_1331 0.65 -0.5 1,373,520 + B158DRAFT_1331 0.73 -0.4 1,373,537 + B158DRAFT_1331 0.74 +1.0 1,373,542 + B158DRAFT_1331 0.75 +0.4 1,373,552 + B158DRAFT_1331 0.76 -0.3 1,373,572 + B158DRAFT_1331 0.78 -0.0 1,373,572 + B158DRAFT_1331 0.78 -0.3 1,373,588 + B158DRAFT_1331 0.79 +1.1 1,373,596 - B158DRAFT_1331 0.80 -0.7 1,373,611 + B158DRAFT_1331 0.82 +0.2 1,373,611 + B158DRAFT_1331 0.82 +0.3 1,373,611 + B158DRAFT_1331 0.82 +0.4 1,373,622 - B158DRAFT_1331 0.83 +1.1 1,373,634 + B158DRAFT_1331 0.84 -0.2 1,373,675 - B158DRAFT_1331 0.88 +0.1 1,373,692 + B158DRAFT_1331 0.90 -1.9 1,373,692 + B158DRAFT_1331 0.90 +0.1 1,373,692 + B158DRAFT_1331 0.90 +0.4 1,373,692 + B158DRAFT_1331 0.90 +0.8 1,373,700 - +0.6 1,373,700 - -0.3 1,373,700 - +1.4 1,373,700 - +0.2 1,373,702 + +0.4 1,373,715 - -0.4 1,373,755 - -0.1
Or see this region's nucleotide sequence