Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0952

Experiment: m.b. Paraquat dichloride 0.0078125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0950 and B158DRAFT_0951 are separated by 17 nucleotidesB158DRAFT_0951 and B158DRAFT_0952 are separated by 6 nucleotidesB158DRAFT_0952 and B158DRAFT_0953 overlap by 4 nucleotides B158DRAFT_0950: B158DRAFT_0950 - ABC-type antimicrobial peptide transport system, ATPase component, at 978,498 to 979,211 _0950 B158DRAFT_0951: B158DRAFT_0951 - Cytochrome C', at 979,229 to 979,708 _0951 B158DRAFT_0952: B158DRAFT_0952 - efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family, at 979,715 to 981,181 _0952 B158DRAFT_0953: B158DRAFT_0953 - K+-dependent Na+/Ca+ exchanger related-protein, at 981,178 to 982,146 _0953 Position (kb) 979 980 981 982Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 978.906 kb on + strand, within B158DRAFT_0950at 978.906 kb on + strand, within B158DRAFT_0950at 978.911 kb on + strand, within B158DRAFT_0950at 978.925 kb on - strand, within B158DRAFT_0950at 978.956 kb on + strand, within B158DRAFT_0950at 979.018 kb on + strand, within B158DRAFT_0950at 979.045 kb on + strand, within B158DRAFT_0950at 979.193 kb on - strandat 979.198 kb on - strandat 979.198 kb on - strandat 979.225 kb on - strandat 979.320 kb on - strand, within B158DRAFT_0951at 979.648 kb on + strand, within B158DRAFT_0951at 979.792 kb on + strandat 979.869 kb on + strand, within B158DRAFT_0952at 979.974 kb on + strand, within B158DRAFT_0952at 980.010 kb on + strand, within B158DRAFT_0952at 980.010 kb on + strand, within B158DRAFT_0952at 980.010 kb on + strand, within B158DRAFT_0952at 980.010 kb on + strand, within B158DRAFT_0952at 980.018 kb on - strand, within B158DRAFT_0952at 980.018 kb on - strand, within B158DRAFT_0952at 980.029 kb on + strand, within B158DRAFT_0952at 980.187 kb on + strand, within B158DRAFT_0952at 980.195 kb on - strand, within B158DRAFT_0952at 980.210 kb on - strand, within B158DRAFT_0952at 980.217 kb on + strand, within B158DRAFT_0952at 980.244 kb on + strand, within B158DRAFT_0952at 980.247 kb on - strand, within B158DRAFT_0952at 980.279 kb on + strand, within B158DRAFT_0952at 980.279 kb on + strand, within B158DRAFT_0952at 980.306 kb on + strand, within B158DRAFT_0952at 980.308 kb on + strand, within B158DRAFT_0952at 980.316 kb on - strand, within B158DRAFT_0952at 980.316 kb on - strand, within B158DRAFT_0952at 980.328 kb on + strand, within B158DRAFT_0952at 980.422 kb on + strand, within B158DRAFT_0952at 980.585 kb on - strand, within B158DRAFT_0952at 980.619 kb on - strand, within B158DRAFT_0952at 980.961 kb on + strand, within B158DRAFT_0952at 980.966 kb on + strand, within B158DRAFT_0952at 980.999 kb on - strand, within B158DRAFT_0952at 981.045 kb on - strandat 981.069 kb on + strandat 981.106 kb on + strandat 981.106 kb on + strandat 981.106 kb on + strandat 981.114 kb on - strandat 981.114 kb on - strandat 981.114 kb on - strandat 981.170 kb on - strandat 981.204 kb on - strandat 981.217 kb on + strandat 981.270 kb on - strandat 981.304 kb on + strand, within B158DRAFT_0953at 981.307 kb on + strand, within B158DRAFT_0953at 981.312 kb on - strand, within B158DRAFT_0953at 981.314 kb on + strand, within B158DRAFT_0953at 981.314 kb on + strand, within B158DRAFT_0953at 981.314 kb on + strand, within B158DRAFT_0953at 981.314 kb on + strand, within B158DRAFT_0953at 981.322 kb on - strand, within B158DRAFT_0953at 981.322 kb on - strand, within B158DRAFT_0953at 981.322 kb on - strand, within B158DRAFT_0953at 981.322 kb on - strand, within B158DRAFT_0953at 981.322 kb on - strand, within B158DRAFT_0953at 981.322 kb on - strand, within B158DRAFT_0953at 981.349 kb on - strand, within B158DRAFT_0953at 981.350 kb on - strand, within B158DRAFT_0953at 981.398 kb on + strand, within B158DRAFT_0953at 981.398 kb on - strand, within B158DRAFT_0953at 981.406 kb on - strand, within B158DRAFT_0953at 981.406 kb on - strand, within B158DRAFT_0953at 981.408 kb on + strand, within B158DRAFT_0953at 981.416 kb on - strand, within B158DRAFT_0953at 981.416 kb on - strand, within B158DRAFT_0953at 981.416 kb on - strand, within B158DRAFT_0953at 981.416 kb on - strand, within B158DRAFT_0953at 981.430 kb on - strand, within B158DRAFT_0953at 981.446 kb on - strand, within B158DRAFT_0953at 981.545 kb on - strand, within B158DRAFT_0953at 981.545 kb on - strand, within B158DRAFT_0953at 981.547 kb on - strand, within B158DRAFT_0953at 981.547 kb on - strand, within B158DRAFT_0953at 981.566 kb on + strand, within B158DRAFT_0953at 981.566 kb on + strand, within B158DRAFT_0953at 981.566 kb on + strand, within B158DRAFT_0953at 981.566 kb on + strand, within B158DRAFT_0953at 981.566 kb on + strand, within B158DRAFT_0953at 981.579 kb on + strand, within B158DRAFT_0953at 981.579 kb on + strand, within B158DRAFT_0953at 981.587 kb on - strand, within B158DRAFT_0953at 981.617 kb on + strand, within B158DRAFT_0953at 981.654 kb on - strand, within B158DRAFT_0953at 981.727 kb on - strand, within B158DRAFT_0953at 981.778 kb on + strand, within B158DRAFT_0953at 981.812 kb on - strand, within B158DRAFT_0953at 981.874 kb on + strand, within B158DRAFT_0953at 981.882 kb on - strand, within B158DRAFT_0953at 981.883 kb on + strand, within B158DRAFT_0953at 981.929 kb on + strand, within B158DRAFT_0953at 981.934 kb on + strand, within B158DRAFT_0953at 981.934 kb on + strand, within B158DRAFT_0953at 981.934 kb on + strand, within B158DRAFT_0953at 981.942 kb on - strand, within B158DRAFT_0953at 981.950 kb on + strand, within B158DRAFT_0953at 981.950 kb on + strand, within B158DRAFT_0953at 981.955 kb on + strand, within B158DRAFT_0953at 981.958 kb on - strand, within B158DRAFT_0953at 981.963 kb on - strand, within B158DRAFT_0953at 981.963 kb on - strand, within B158DRAFT_0953at 982.051 kb on - strandat 982.143 kb on + strandat 982.151 kb on - strandat 982.167 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.0078125 mg/ml
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978,906 + B158DRAFT_0950 0.57 -3.0
978,906 + B158DRAFT_0950 0.57 +0.5
978,911 + B158DRAFT_0950 0.58 -0.5
978,925 - B158DRAFT_0950 0.60 -0.1
978,956 + B158DRAFT_0950 0.64 -1.0
979,018 + B158DRAFT_0950 0.73 -0.1
979,045 + B158DRAFT_0950 0.77 -0.6
979,193 - -0.3
979,198 - +0.8
979,198 - -0.4
979,225 - +0.5
979,320 - B158DRAFT_0951 0.19 +0.4
979,648 + B158DRAFT_0951 0.87 +0.3
979,792 + +0.1
979,869 + B158DRAFT_0952 0.10 -0.0
979,974 + B158DRAFT_0952 0.18 +0.6
980,010 + B158DRAFT_0952 0.20 +0.3
980,010 + B158DRAFT_0952 0.20 -0.1
980,010 + B158DRAFT_0952 0.20 +0.1
980,010 + B158DRAFT_0952 0.20 +0.2
980,018 - B158DRAFT_0952 0.21 -1.2
980,018 - B158DRAFT_0952 0.21 -0.0
980,029 + B158DRAFT_0952 0.21 -0.3
980,187 + B158DRAFT_0952 0.32 +0.4
980,195 - B158DRAFT_0952 0.33 -1.0
980,210 - B158DRAFT_0952 0.34 -0.0
980,217 + B158DRAFT_0952 0.34 -0.2
980,244 + B158DRAFT_0952 0.36 +0.3
980,247 - B158DRAFT_0952 0.36 -0.3
980,279 + B158DRAFT_0952 0.38 -1.3
980,279 + B158DRAFT_0952 0.38 -0.0
980,306 + B158DRAFT_0952 0.40 +0.4
980,308 + B158DRAFT_0952 0.40 +0.3
980,316 - B158DRAFT_0952 0.41 -0.2
980,316 - B158DRAFT_0952 0.41 -0.0
980,328 + B158DRAFT_0952 0.42 +0.6
980,422 + B158DRAFT_0952 0.48 -0.9
980,585 - B158DRAFT_0952 0.59 +1.0
980,619 - B158DRAFT_0952 0.62 -0.2
980,961 + B158DRAFT_0952 0.85 -0.7
980,966 + B158DRAFT_0952 0.85 -0.5
980,999 - B158DRAFT_0952 0.88 -0.0
981,045 - -0.1
981,069 + -0.0
981,106 + -0.4
981,106 + -0.1
981,106 + -0.1
981,114 - -1.1
981,114 - -1.8
981,114 - -0.7
981,170 - +0.8
981,204 - +0.4
981,217 + -0.8
981,270 - -0.3
981,304 + B158DRAFT_0953 0.13 -0.0
981,307 + B158DRAFT_0953 0.13 -0.2
981,312 - B158DRAFT_0953 0.14 -0.6
981,314 + B158DRAFT_0953 0.14 -0.2
981,314 + B158DRAFT_0953 0.14 +1.6
981,314 + B158DRAFT_0953 0.14 +0.1
981,314 + B158DRAFT_0953 0.14 -0.1
981,322 - B158DRAFT_0953 0.15 -0.1
981,322 - B158DRAFT_0953 0.15 -1.4
981,322 - B158DRAFT_0953 0.15 +0.1
981,322 - B158DRAFT_0953 0.15 -0.4
981,322 - B158DRAFT_0953 0.15 +3.8
981,322 - B158DRAFT_0953 0.15 -0.5
981,349 - B158DRAFT_0953 0.18 +0.0
981,350 - B158DRAFT_0953 0.18 -0.1
981,398 + B158DRAFT_0953 0.23 -0.7
981,398 - B158DRAFT_0953 0.23 -0.5
981,406 - B158DRAFT_0953 0.24 -1.2
981,406 - B158DRAFT_0953 0.24 -0.6
981,408 + B158DRAFT_0953 0.24 -0.4
981,416 - B158DRAFT_0953 0.25 -2.0
981,416 - B158DRAFT_0953 0.25 +0.2
981,416 - B158DRAFT_0953 0.25 +3.9
981,416 - B158DRAFT_0953 0.25 +0.5
981,430 - B158DRAFT_0953 0.26 -0.2
981,446 - B158DRAFT_0953 0.28 +0.3
981,545 - B158DRAFT_0953 0.38 -0.1
981,545 - B158DRAFT_0953 0.38 -0.8
981,547 - B158DRAFT_0953 0.38 -0.6
981,547 - B158DRAFT_0953 0.38 -0.8
981,566 + B158DRAFT_0953 0.40 -0.3
981,566 + B158DRAFT_0953 0.40 -0.1
981,566 + B158DRAFT_0953 0.40 -0.4
981,566 + B158DRAFT_0953 0.40 -0.3
981,566 + B158DRAFT_0953 0.40 -1.2
981,579 + B158DRAFT_0953 0.41 -0.1
981,579 + B158DRAFT_0953 0.41 +0.6
981,587 - B158DRAFT_0953 0.42 -0.1
981,617 + B158DRAFT_0953 0.45 -0.2
981,654 - B158DRAFT_0953 0.49 -0.0
981,727 - B158DRAFT_0953 0.57 -0.2
981,778 + B158DRAFT_0953 0.62 +0.3
981,812 - B158DRAFT_0953 0.65 +1.7
981,874 + B158DRAFT_0953 0.72 -0.6
981,882 - B158DRAFT_0953 0.73 -0.3
981,883 + B158DRAFT_0953 0.73 -0.3
981,929 + B158DRAFT_0953 0.78 -0.8
981,934 + B158DRAFT_0953 0.78 -0.6
981,934 + B158DRAFT_0953 0.78 +0.3
981,934 + B158DRAFT_0953 0.78 +0.0
981,942 - B158DRAFT_0953 0.79 +0.5
981,950 + B158DRAFT_0953 0.80 -0.1
981,950 + B158DRAFT_0953 0.80 +0.3
981,955 + B158DRAFT_0953 0.80 +0.3
981,958 - B158DRAFT_0953 0.80 +0.4
981,963 - B158DRAFT_0953 0.81 -0.4
981,963 - B158DRAFT_0953 0.81 +0.0
982,051 - -0.1
982,143 + +0.0
982,151 - +0.2
982,167 - -0.1

Or see this region's nucleotide sequence