Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0884

Experiment: m.b. Paraquat dichloride 0.0078125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0883 and B158DRAFT_0884 are separated by 175 nucleotidesB158DRAFT_0884 and B158DRAFT_0885 are separated by 56 nucleotides B158DRAFT_0883: B158DRAFT_0883 - Membrane protein TerC, possibly involved in tellurium resistance, at 899,102 to 899,917 _0883 B158DRAFT_0884: B158DRAFT_0884 - Predicted extracellular nuclease, at 900,093 to 902,720 _0884 B158DRAFT_0885: B158DRAFT_0885 - excinuclease ABC, A subunit, at 902,777 to 905,602 _0885 Position (kb) 900 901 902 903Strain fitness (log2 ratio) -2 -1 0 1at 899.284 kb on - strand, within B158DRAFT_0883at 899.284 kb on - strand, within B158DRAFT_0883at 899.302 kb on + strand, within B158DRAFT_0883at 899.397 kb on - strand, within B158DRAFT_0883at 899.427 kb on - strand, within B158DRAFT_0883at 899.470 kb on + strand, within B158DRAFT_0883at 899.587 kb on - strand, within B158DRAFT_0883at 899.597 kb on + strand, within B158DRAFT_0883at 899.788 kb on - strand, within B158DRAFT_0883at 899.941 kb on - strandat 899.978 kb on - strandat 900.097 kb on + strandat 900.180 kb on + strandat 900.186 kb on - strandat 900.215 kb on + strandat 900.253 kb on - strandat 900.288 kb on - strandat 900.358 kb on - strand, within B158DRAFT_0884at 900.366 kb on + strand, within B158DRAFT_0884at 900.368 kb on - strand, within B158DRAFT_0884at 900.432 kb on + strand, within B158DRAFT_0884at 900.440 kb on - strand, within B158DRAFT_0884at 900.473 kb on - strand, within B158DRAFT_0884at 900.482 kb on - strand, within B158DRAFT_0884at 900.490 kb on - strand, within B158DRAFT_0884at 900.635 kb on + strand, within B158DRAFT_0884at 900.701 kb on - strand, within B158DRAFT_0884at 900.765 kb on + strand, within B158DRAFT_0884at 900.841 kb on - strand, within B158DRAFT_0884at 900.894 kb on + strand, within B158DRAFT_0884at 900.894 kb on + strand, within B158DRAFT_0884at 900.894 kb on + strand, within B158DRAFT_0884at 900.907 kb on - strand, within B158DRAFT_0884at 900.907 kb on - strand, within B158DRAFT_0884at 900.923 kb on + strand, within B158DRAFT_0884at 900.933 kb on + strand, within B158DRAFT_0884at 900.933 kb on + strand, within B158DRAFT_0884at 900.933 kb on + strand, within B158DRAFT_0884at 900.941 kb on - strand, within B158DRAFT_0884at 901.047 kb on + strand, within B158DRAFT_0884at 901.139 kb on - strand, within B158DRAFT_0884at 901.139 kb on - strand, within B158DRAFT_0884at 901.189 kb on + strand, within B158DRAFT_0884at 901.221 kb on + strand, within B158DRAFT_0884at 901.221 kb on + strand, within B158DRAFT_0884at 901.229 kb on - strand, within B158DRAFT_0884at 901.265 kb on - strand, within B158DRAFT_0884at 901.375 kb on + strand, within B158DRAFT_0884at 901.375 kb on + strand, within B158DRAFT_0884at 901.389 kb on + strand, within B158DRAFT_0884at 901.397 kb on - strand, within B158DRAFT_0884at 901.464 kb on - strand, within B158DRAFT_0884at 901.471 kb on + strand, within B158DRAFT_0884at 901.471 kb on + strand, within B158DRAFT_0884at 901.471 kb on + strand, within B158DRAFT_0884at 901.471 kb on + strand, within B158DRAFT_0884at 901.471 kb on + strand, within B158DRAFT_0884at 901.471 kb on + strand, within B158DRAFT_0884at 901.471 kb on + strand, within B158DRAFT_0884at 901.471 kb on + strand, within B158DRAFT_0884at 901.471 kb on + strand, within B158DRAFT_0884at 901.471 kb on + strand, within B158DRAFT_0884at 901.479 kb on - strand, within B158DRAFT_0884at 901.479 kb on - strand, within B158DRAFT_0884at 901.503 kb on + strand, within B158DRAFT_0884at 901.503 kb on + strand, within B158DRAFT_0884at 901.503 kb on + strand, within B158DRAFT_0884at 901.503 kb on + strand, within B158DRAFT_0884at 901.508 kb on + strand, within B158DRAFT_0884at 901.511 kb on - strand, within B158DRAFT_0884at 901.515 kb on + strand, within B158DRAFT_0884at 901.525 kb on - strand, within B158DRAFT_0884at 901.534 kb on + strand, within B158DRAFT_0884at 901.679 kb on + strand, within B158DRAFT_0884at 901.764 kb on + strand, within B158DRAFT_0884at 901.808 kb on - strand, within B158DRAFT_0884at 901.817 kb on - strand, within B158DRAFT_0884at 901.827 kb on - strand, within B158DRAFT_0884at 901.857 kb on + strand, within B158DRAFT_0884at 901.865 kb on - strand, within B158DRAFT_0884at 901.880 kb on - strand, within B158DRAFT_0884at 901.882 kb on + strand, within B158DRAFT_0884at 901.890 kb on - strand, within B158DRAFT_0884at 901.976 kb on + strand, within B158DRAFT_0884at 902.012 kb on + strand, within B158DRAFT_0884at 902.012 kb on + strand, within B158DRAFT_0884at 902.012 kb on + strand, within B158DRAFT_0884at 902.014 kb on + strand, within B158DRAFT_0884at 902.020 kb on - strand, within B158DRAFT_0884at 902.020 kb on - strand, within B158DRAFT_0884at 902.063 kb on - strand, within B158DRAFT_0884at 902.203 kb on + strand, within B158DRAFT_0884at 902.211 kb on - strand, within B158DRAFT_0884at 902.211 kb on - strand, within B158DRAFT_0884at 902.211 kb on - strand, within B158DRAFT_0884at 902.211 kb on - strand, within B158DRAFT_0884at 902.211 kb on - strand, within B158DRAFT_0884at 902.211 kb on - strand, within B158DRAFT_0884at 902.224 kb on + strand, within B158DRAFT_0884at 902.298 kb on - strand, within B158DRAFT_0884at 902.298 kb on - strand, within B158DRAFT_0884at 902.317 kb on - strand, within B158DRAFT_0884at 902.373 kb on + strand, within B158DRAFT_0884at 902.514 kb on - strandat 902.514 kb on - strandat 902.633 kb on + strandat 902.639 kb on + strandat 902.641 kb on - strandat 902.641 kb on - strandat 902.718 kb on - strandat 902.816 kb on - strandat 902.844 kb on - strandat 902.868 kb on + strandat 902.889 kb on - strandat 902.982 kb on + strandat 902.990 kb on - strandat 902.990 kb on - strandat 902.990 kb on - strandat 903.011 kb on + strandat 903.016 kb on + strandat 903.019 kb on - strandat 903.026 kb on + strandat 903.026 kb on - strandat 903.038 kb on + strandat 903.038 kb on + strandat 903.046 kb on - strandat 903.046 kb on - strandat 903.046 kb on - strandat 903.046 kb on - strandat 903.049 kb on - strandat 903.085 kb on + strand, within B158DRAFT_0885at 903.131 kb on + strand, within B158DRAFT_0885at 903.144 kb on - strand, within B158DRAFT_0885at 903.228 kb on + strand, within B158DRAFT_0885at 903.233 kb on + strand, within B158DRAFT_0885at 903.233 kb on + strand, within B158DRAFT_0885at 903.266 kb on - strand, within B158DRAFT_0885at 903.287 kb on + strand, within B158DRAFT_0885at 903.310 kb on + strand, within B158DRAFT_0885at 903.310 kb on + strand, within B158DRAFT_0885at 903.371 kb on - strand, within B158DRAFT_0885at 903.378 kb on + strand, within B158DRAFT_0885at 903.408 kb on - strand, within B158DRAFT_0885at 903.453 kb on - strand, within B158DRAFT_0885at 903.514 kb on + strand, within B158DRAFT_0885at 903.640 kb on + strand, within B158DRAFT_0885at 903.689 kb on - strand, within B158DRAFT_0885

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.0078125 mg/ml
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899,284 - B158DRAFT_0883 0.22 +0.2
899,284 - B158DRAFT_0883 0.22 -0.0
899,302 + B158DRAFT_0883 0.25 -0.2
899,397 - B158DRAFT_0883 0.36 -0.1
899,427 - B158DRAFT_0883 0.40 -0.2
899,470 + B158DRAFT_0883 0.45 -0.7
899,587 - B158DRAFT_0883 0.59 -0.4
899,597 + B158DRAFT_0883 0.61 +0.4
899,788 - B158DRAFT_0883 0.84 +0.3
899,941 - -0.1
899,978 - -0.6
900,097 + -0.0
900,180 + -0.3
900,186 - -0.3
900,215 + +0.6
900,253 - +0.5
900,288 - -1.8
900,358 - B158DRAFT_0884 0.10 +0.5
900,366 + B158DRAFT_0884 0.10 -0.5
900,368 - B158DRAFT_0884 0.10 +0.1
900,432 + B158DRAFT_0884 0.13 -0.4
900,440 - B158DRAFT_0884 0.13 +0.9
900,473 - B158DRAFT_0884 0.14 -0.2
900,482 - B158DRAFT_0884 0.15 -0.1
900,490 - B158DRAFT_0884 0.15 -1.2
900,635 + B158DRAFT_0884 0.21 -0.4
900,701 - B158DRAFT_0884 0.23 -1.0
900,765 + B158DRAFT_0884 0.26 -0.2
900,841 - B158DRAFT_0884 0.28 +0.7
900,894 + B158DRAFT_0884 0.30 +0.0
900,894 + B158DRAFT_0884 0.30 -0.3
900,894 + B158DRAFT_0884 0.30 -0.1
900,907 - B158DRAFT_0884 0.31 -2.5
900,907 - B158DRAFT_0884 0.31 +0.1
900,923 + B158DRAFT_0884 0.32 -0.4
900,933 + B158DRAFT_0884 0.32 -0.0
900,933 + B158DRAFT_0884 0.32 -0.4
900,933 + B158DRAFT_0884 0.32 -0.0
900,941 - B158DRAFT_0884 0.32 -0.3
901,047 + B158DRAFT_0884 0.36 +0.0
901,139 - B158DRAFT_0884 0.40 +0.6
901,139 - B158DRAFT_0884 0.40 -0.1
901,189 + B158DRAFT_0884 0.42 -0.1
901,221 + B158DRAFT_0884 0.43 +0.5
901,221 + B158DRAFT_0884 0.43 -1.0
901,229 - B158DRAFT_0884 0.43 -0.3
901,265 - B158DRAFT_0884 0.45 -1.0
901,375 + B158DRAFT_0884 0.49 +0.2
901,375 + B158DRAFT_0884 0.49 +0.5
901,389 + B158DRAFT_0884 0.49 -0.1
901,397 - B158DRAFT_0884 0.50 +0.3
901,464 - B158DRAFT_0884 0.52 -0.1
901,471 + B158DRAFT_0884 0.52 -0.9
901,471 + B158DRAFT_0884 0.52 +0.2
901,471 + B158DRAFT_0884 0.52 +0.1
901,471 + B158DRAFT_0884 0.52 -0.6
901,471 + B158DRAFT_0884 0.52 +1.0
901,471 + B158DRAFT_0884 0.52 -0.3
901,471 + B158DRAFT_0884 0.52 +0.5
901,471 + B158DRAFT_0884 0.52 -0.7
901,471 + B158DRAFT_0884 0.52 +0.1
901,471 + B158DRAFT_0884 0.52 -1.2
901,479 - B158DRAFT_0884 0.53 -0.7
901,479 - B158DRAFT_0884 0.53 -0.3
901,503 + B158DRAFT_0884 0.54 -0.3
901,503 + B158DRAFT_0884 0.54 -1.3
901,503 + B158DRAFT_0884 0.54 -0.4
901,503 + B158DRAFT_0884 0.54 -0.6
901,508 + B158DRAFT_0884 0.54 -0.9
901,511 - B158DRAFT_0884 0.54 -0.7
901,515 + B158DRAFT_0884 0.54 -0.4
901,525 - B158DRAFT_0884 0.54 -0.1
901,534 + B158DRAFT_0884 0.55 -1.1
901,679 + B158DRAFT_0884 0.60 -0.2
901,764 + B158DRAFT_0884 0.64 -0.5
901,808 - B158DRAFT_0884 0.65 -0.1
901,817 - B158DRAFT_0884 0.66 -0.5
901,827 - B158DRAFT_0884 0.66 +0.2
901,857 + B158DRAFT_0884 0.67 +0.7
901,865 - B158DRAFT_0884 0.67 +0.1
901,880 - B158DRAFT_0884 0.68 +0.7
901,882 + B158DRAFT_0884 0.68 -0.8
901,890 - B158DRAFT_0884 0.68 -0.1
901,976 + B158DRAFT_0884 0.72 +0.2
902,012 + B158DRAFT_0884 0.73 -0.1
902,012 + B158DRAFT_0884 0.73 -0.6
902,012 + B158DRAFT_0884 0.73 -0.3
902,014 + B158DRAFT_0884 0.73 +0.3
902,020 - B158DRAFT_0884 0.73 -0.7
902,020 - B158DRAFT_0884 0.73 -0.5
902,063 - B158DRAFT_0884 0.75 -0.9
902,203 + B158DRAFT_0884 0.80 +0.1
902,211 - B158DRAFT_0884 0.81 -0.0
902,211 - B158DRAFT_0884 0.81 -0.3
902,211 - B158DRAFT_0884 0.81 -1.2
902,211 - B158DRAFT_0884 0.81 -0.1
902,211 - B158DRAFT_0884 0.81 -0.4
902,211 - B158DRAFT_0884 0.81 +0.2
902,224 + B158DRAFT_0884 0.81 -0.1
902,298 - B158DRAFT_0884 0.84 +0.2
902,298 - B158DRAFT_0884 0.84 -0.4
902,317 - B158DRAFT_0884 0.85 +0.1
902,373 + B158DRAFT_0884 0.87 -0.6
902,514 - -0.2
902,514 - +0.5
902,633 + -0.4
902,639 + +0.8
902,641 - +0.0
902,641 - -0.2
902,718 - +0.0
902,816 - -0.4
902,844 - +0.1
902,868 + -0.0
902,889 - +0.1
902,982 + -0.9
902,990 - +0.1
902,990 - +0.0
902,990 - +0.6
903,011 + -0.1
903,016 + +0.8
903,019 - -0.5
903,026 + -0.8
903,026 - +0.2
903,038 + -0.5
903,038 + +0.3
903,046 - -0.1
903,046 - -0.2
903,046 - -0.0
903,046 - -0.2
903,049 - -0.5
903,085 + B158DRAFT_0885 0.11 +0.8
903,131 + B158DRAFT_0885 0.13 -1.1
903,144 - B158DRAFT_0885 0.13 -0.3
903,228 + B158DRAFT_0885 0.16 -0.3
903,233 + B158DRAFT_0885 0.16 -0.1
903,233 + B158DRAFT_0885 0.16 -0.3
903,266 - B158DRAFT_0885 0.17 -0.3
903,287 + B158DRAFT_0885 0.18 -0.2
903,310 + B158DRAFT_0885 0.19 -1.6
903,310 + B158DRAFT_0885 0.19 -0.5
903,371 - B158DRAFT_0885 0.21 +0.2
903,378 + B158DRAFT_0885 0.21 +0.2
903,408 - B158DRAFT_0885 0.22 -0.5
903,453 - B158DRAFT_0885 0.24 -0.2
903,514 + B158DRAFT_0885 0.26 -0.1
903,640 + B158DRAFT_0885 0.31 -0.1
903,689 - B158DRAFT_0885 0.32 +0.4

Or see this region's nucleotide sequence