Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0569

Experiment: m.b. Paraquat dichloride 0.0078125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0567 and B158DRAFT_0568 are separated by 88 nucleotidesB158DRAFT_0568 and B158DRAFT_0569 overlap by 32 nucleotidesB158DRAFT_0569 and B158DRAFT_0570 are separated by 276 nucleotides B158DRAFT_0567: B158DRAFT_0567 - Transcriptional regulator, at 571,924 to 572,841 _0567 B158DRAFT_0568: B158DRAFT_0568 - Rhodanese-like domain/Tellurite resistance protein TehB, at 572,930 to 573,766 _0568 B158DRAFT_0569: B158DRAFT_0569 - Predicted membrane protein, at 573,735 to 574,958 _0569 B158DRAFT_0570: B158DRAFT_0570 - Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain, at 575,235 to 576,191 _0570 Position (kb) 573 574 575Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 572.747 kb on + strand, within B158DRAFT_0567at 572.778 kb on - strandat 572.904 kb on - strandat 572.962 kb on - strandat 573.106 kb on - strand, within B158DRAFT_0568at 573.134 kb on - strand, within B158DRAFT_0568at 573.134 kb on - strand, within B158DRAFT_0568at 573.147 kb on - strand, within B158DRAFT_0568at 573.176 kb on + strand, within B158DRAFT_0568at 573.176 kb on + strand, within B158DRAFT_0568at 573.223 kb on + strand, within B158DRAFT_0568at 573.269 kb on - strand, within B158DRAFT_0568at 573.334 kb on + strand, within B158DRAFT_0568at 573.365 kb on + strand, within B158DRAFT_0568at 573.403 kb on + strand, within B158DRAFT_0568at 573.403 kb on + strand, within B158DRAFT_0568at 573.411 kb on - strand, within B158DRAFT_0568at 573.482 kb on + strand, within B158DRAFT_0568at 573.497 kb on - strand, within B158DRAFT_0568at 573.497 kb on - strand, within B158DRAFT_0568at 573.497 kb on - strand, within B158DRAFT_0568at 573.574 kb on - strand, within B158DRAFT_0568at 573.574 kb on - strand, within B158DRAFT_0568at 573.682 kb on + strand, within B158DRAFT_0568at 573.690 kb on - strandat 573.691 kb on - strandat 573.701 kb on + strandat 573.701 kb on + strandat 573.703 kb on + strandat 573.713 kb on + strandat 573.728 kb on + strandat 573.736 kb on - strandat 573.812 kb on + strandat 573.916 kb on + strand, within B158DRAFT_0569at 573.936 kb on + strand, within B158DRAFT_0569at 573.943 kb on - strand, within B158DRAFT_0569at 573.960 kb on + strand, within B158DRAFT_0569at 573.960 kb on + strand, within B158DRAFT_0569at 573.968 kb on - strand, within B158DRAFT_0569at 574.032 kb on + strand, within B158DRAFT_0569at 574.057 kb on + strand, within B158DRAFT_0569at 574.057 kb on + strand, within B158DRAFT_0569at 574.057 kb on + strand, within B158DRAFT_0569at 574.065 kb on - strand, within B158DRAFT_0569at 574.109 kb on - strand, within B158DRAFT_0569at 574.181 kb on - strand, within B158DRAFT_0569at 574.230 kb on - strand, within B158DRAFT_0569at 574.247 kb on + strand, within B158DRAFT_0569at 574.274 kb on - strand, within B158DRAFT_0569at 574.300 kb on - strand, within B158DRAFT_0569at 574.301 kb on - strand, within B158DRAFT_0569at 574.336 kb on - strand, within B158DRAFT_0569at 574.346 kb on + strand, within B158DRAFT_0569at 574.371 kb on + strand, within B158DRAFT_0569at 574.372 kb on + strand, within B158DRAFT_0569at 574.378 kb on + strand, within B158DRAFT_0569at 574.386 kb on - strand, within B158DRAFT_0569at 574.405 kb on + strand, within B158DRAFT_0569at 574.405 kb on + strand, within B158DRAFT_0569at 574.405 kb on + strand, within B158DRAFT_0569at 574.405 kb on + strand, within B158DRAFT_0569at 574.405 kb on + strand, within B158DRAFT_0569at 574.405 kb on + strand, within B158DRAFT_0569at 574.405 kb on + strand, within B158DRAFT_0569at 574.405 kb on + strand, within B158DRAFT_0569at 574.413 kb on - strand, within B158DRAFT_0569at 574.413 kb on - strand, within B158DRAFT_0569at 574.413 kb on - strand, within B158DRAFT_0569at 574.413 kb on - strand, within B158DRAFT_0569at 574.413 kb on - strand, within B158DRAFT_0569at 574.413 kb on - strand, within B158DRAFT_0569at 574.446 kb on + strand, within B158DRAFT_0569at 574.486 kb on - strand, within B158DRAFT_0569at 574.567 kb on + strand, within B158DRAFT_0569at 574.572 kb on + strand, within B158DRAFT_0569at 574.602 kb on + strand, within B158DRAFT_0569at 574.605 kb on - strand, within B158DRAFT_0569at 574.610 kb on - strand, within B158DRAFT_0569at 574.610 kb on - strand, within B158DRAFT_0569at 574.622 kb on + strand, within B158DRAFT_0569at 574.672 kb on + strand, within B158DRAFT_0569at 574.680 kb on - strand, within B158DRAFT_0569at 574.684 kb on + strand, within B158DRAFT_0569at 574.692 kb on - strand, within B158DRAFT_0569at 574.692 kb on - strand, within B158DRAFT_0569at 574.729 kb on + strand, within B158DRAFT_0569at 574.737 kb on - strand, within B158DRAFT_0569at 574.749 kb on + strand, within B158DRAFT_0569at 574.777 kb on + strand, within B158DRAFT_0569at 574.782 kb on + strand, within B158DRAFT_0569at 574.790 kb on - strand, within B158DRAFT_0569at 574.925 kb on + strandat 574.928 kb on - strandat 574.933 kb on + strandat 575.028 kb on + strandat 575.090 kb on + strandat 575.111 kb on + strandat 575.134 kb on + strandat 575.142 kb on - strandat 575.280 kb on - strandat 575.285 kb on + strandat 575.293 kb on - strandat 575.325 kb on - strandat 575.344 kb on + strand, within B158DRAFT_0570at 575.381 kb on + strand, within B158DRAFT_0570at 575.409 kb on - strand, within B158DRAFT_0570at 575.420 kb on + strand, within B158DRAFT_0570at 575.470 kb on - strand, within B158DRAFT_0570at 575.478 kb on - strand, within B158DRAFT_0570at 575.481 kb on + strand, within B158DRAFT_0570at 575.541 kb on - strand, within B158DRAFT_0570at 575.588 kb on + strand, within B158DRAFT_0570at 575.596 kb on - strand, within B158DRAFT_0570at 575.613 kb on + strand, within B158DRAFT_0570at 575.621 kb on - strand, within B158DRAFT_0570at 575.623 kb on + strand, within B158DRAFT_0570at 575.644 kb on - strand, within B158DRAFT_0570at 575.725 kb on + strand, within B158DRAFT_0570at 575.725 kb on + strand, within B158DRAFT_0570at 575.725 kb on + strand, within B158DRAFT_0570at 575.725 kb on + strand, within B158DRAFT_0570at 575.725 kb on + strand, within B158DRAFT_0570at 575.725 kb on + strand, within B158DRAFT_0570at 575.725 kb on + strand, within B158DRAFT_0570at 575.725 kb on + strand, within B158DRAFT_0570at 575.725 kb on + strand, within B158DRAFT_0570at 575.733 kb on - strand, within B158DRAFT_0570at 575.733 kb on - strand, within B158DRAFT_0570at 575.733 kb on - strand, within B158DRAFT_0570at 575.733 kb on - strand, within B158DRAFT_0570at 575.733 kb on - strand, within B158DRAFT_0570at 575.733 kb on - strand, within B158DRAFT_0570at 575.733 kb on - strand, within B158DRAFT_0570at 575.733 kb on - strand, within B158DRAFT_0570at 575.733 kb on - strand, within B158DRAFT_0570at 575.733 kb on - strand, within B158DRAFT_0570at 575.733 kb on - strand, within B158DRAFT_0570at 575.733 kb on - strand, within B158DRAFT_0570at 575.733 kb on - strand, within B158DRAFT_0570at 575.733 kb on - strand, within B158DRAFT_0570at 575.733 kb on - strand, within B158DRAFT_0570at 575.759 kb on - strand, within B158DRAFT_0570at 575.775 kb on + strand, within B158DRAFT_0570at 575.792 kb on + strand, within B158DRAFT_0570at 575.792 kb on + strand, within B158DRAFT_0570at 575.800 kb on - strand, within B158DRAFT_0570at 575.834 kb on - strand, within B158DRAFT_0570at 575.837 kb on - strand, within B158DRAFT_0570at 575.896 kb on + strand, within B158DRAFT_0570at 575.896 kb on + strand, within B158DRAFT_0570at 575.899 kb on - strand, within B158DRAFT_0570at 575.951 kb on + strand, within B158DRAFT_0570

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.0078125 mg/ml
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572,747 + B158DRAFT_0567 0.90 +0.4
572,778 - +0.1
572,904 - -0.7
572,962 - -0.3
573,106 - B158DRAFT_0568 0.21 +0.3
573,134 - B158DRAFT_0568 0.24 +1.1
573,134 - B158DRAFT_0568 0.24 -0.7
573,147 - B158DRAFT_0568 0.26 -0.4
573,176 + B158DRAFT_0568 0.29 -0.2
573,176 + B158DRAFT_0568 0.29 +0.2
573,223 + B158DRAFT_0568 0.35 -0.7
573,269 - B158DRAFT_0568 0.41 -0.3
573,334 + B158DRAFT_0568 0.48 -0.8
573,365 + B158DRAFT_0568 0.52 -0.5
573,403 + B158DRAFT_0568 0.57 -0.1
573,403 + B158DRAFT_0568 0.57 -0.1
573,411 - B158DRAFT_0568 0.57 -0.5
573,482 + B158DRAFT_0568 0.66 -0.1
573,497 - B158DRAFT_0568 0.68 -0.1
573,497 - B158DRAFT_0568 0.68 -1.0
573,497 - B158DRAFT_0568 0.68 -0.2
573,574 - B158DRAFT_0568 0.77 -0.1
573,574 - B158DRAFT_0568 0.77 -0.3
573,682 + B158DRAFT_0568 0.90 -0.7
573,690 - -0.4
573,691 - -0.0
573,701 + +0.1
573,701 + -0.1
573,703 + -1.0
573,713 + -0.1
573,728 + +0.2
573,736 - -0.2
573,812 + -0.1
573,916 + B158DRAFT_0569 0.15 +0.1
573,936 + B158DRAFT_0569 0.16 +0.0
573,943 - B158DRAFT_0569 0.17 +0.1
573,960 + B158DRAFT_0569 0.18 -0.3
573,960 + B158DRAFT_0569 0.18 +0.7
573,968 - B158DRAFT_0569 0.19 +0.6
574,032 + B158DRAFT_0569 0.24 -0.1
574,057 + B158DRAFT_0569 0.26 -0.7
574,057 + B158DRAFT_0569 0.26 +0.8
574,057 + B158DRAFT_0569 0.26 -0.0
574,065 - B158DRAFT_0569 0.27 -0.4
574,109 - B158DRAFT_0569 0.31 +0.1
574,181 - B158DRAFT_0569 0.36 -0.8
574,230 - B158DRAFT_0569 0.40 -0.4
574,247 + B158DRAFT_0569 0.42 -1.2
574,274 - B158DRAFT_0569 0.44 -0.6
574,300 - B158DRAFT_0569 0.46 -0.2
574,301 - B158DRAFT_0569 0.46 -0.5
574,336 - B158DRAFT_0569 0.49 -0.3
574,346 + B158DRAFT_0569 0.50 +0.4
574,371 + B158DRAFT_0569 0.52 +0.5
574,372 + B158DRAFT_0569 0.52 -0.4
574,378 + B158DRAFT_0569 0.53 -0.9
574,386 - B158DRAFT_0569 0.53 +0.2
574,405 + B158DRAFT_0569 0.55 +3.0
574,405 + B158DRAFT_0569 0.55 -0.9
574,405 + B158DRAFT_0569 0.55 +0.1
574,405 + B158DRAFT_0569 0.55 +0.0
574,405 + B158DRAFT_0569 0.55 +0.8
574,405 + B158DRAFT_0569 0.55 -0.3
574,405 + B158DRAFT_0569 0.55 +0.7
574,405 + B158DRAFT_0569 0.55 -0.4
574,413 - B158DRAFT_0569 0.55 -0.2
574,413 - B158DRAFT_0569 0.55 +0.0
574,413 - B158DRAFT_0569 0.55 +0.0
574,413 - B158DRAFT_0569 0.55 +0.0
574,413 - B158DRAFT_0569 0.55 +0.7
574,413 - B158DRAFT_0569 0.55 -0.7
574,446 + B158DRAFT_0569 0.58 -0.8
574,486 - B158DRAFT_0569 0.61 -0.7
574,567 + B158DRAFT_0569 0.68 -0.3
574,572 + B158DRAFT_0569 0.68 +0.5
574,602 + B158DRAFT_0569 0.71 -0.3
574,605 - B158DRAFT_0569 0.71 -0.2
574,610 - B158DRAFT_0569 0.71 -0.1
574,610 - B158DRAFT_0569 0.71 +0.3
574,622 + B158DRAFT_0569 0.72 -0.9
574,672 + B158DRAFT_0569 0.77 +4.1
574,680 - B158DRAFT_0569 0.77 +0.5
574,684 + B158DRAFT_0569 0.78 -1.0
574,692 - B158DRAFT_0569 0.78 +1.1
574,692 - B158DRAFT_0569 0.78 +0.5
574,729 + B158DRAFT_0569 0.81 +1.0
574,737 - B158DRAFT_0569 0.82 -1.2
574,749 + B158DRAFT_0569 0.83 -0.0
574,777 + B158DRAFT_0569 0.85 -0.0
574,782 + B158DRAFT_0569 0.86 +0.2
574,790 - B158DRAFT_0569 0.86 -0.6
574,925 + -0.0
574,928 - +0.7
574,933 + -0.2
575,028 + -0.6
575,090 + -1.8
575,111 + -1.0
575,134 + -0.1
575,142 - -0.2
575,280 - -0.8
575,285 + -0.1
575,293 - -1.5
575,325 - -0.0
575,344 + B158DRAFT_0570 0.11 +0.3
575,381 + B158DRAFT_0570 0.15 -0.6
575,409 - B158DRAFT_0570 0.18 -0.3
575,420 + B158DRAFT_0570 0.19 +0.1
575,470 - B158DRAFT_0570 0.25 -0.4
575,478 - B158DRAFT_0570 0.25 -1.0
575,481 + B158DRAFT_0570 0.26 -0.3
575,541 - B158DRAFT_0570 0.32 +0.5
575,588 + B158DRAFT_0570 0.37 -0.1
575,596 - B158DRAFT_0570 0.38 -0.2
575,613 + B158DRAFT_0570 0.39 -0.1
575,621 - B158DRAFT_0570 0.40 -1.6
575,623 + B158DRAFT_0570 0.41 +0.1
575,644 - B158DRAFT_0570 0.43 -0.0
575,725 + B158DRAFT_0570 0.51 -0.2
575,725 + B158DRAFT_0570 0.51 -0.2
575,725 + B158DRAFT_0570 0.51 -0.3
575,725 + B158DRAFT_0570 0.51 -0.9
575,725 + B158DRAFT_0570 0.51 -0.4
575,725 + B158DRAFT_0570 0.51 -0.3
575,725 + B158DRAFT_0570 0.51 -0.6
575,725 + B158DRAFT_0570 0.51 -0.6
575,725 + B158DRAFT_0570 0.51 -0.2
575,733 - B158DRAFT_0570 0.52 -0.7
575,733 - B158DRAFT_0570 0.52 -0.2
575,733 - B158DRAFT_0570 0.52 -1.1
575,733 - B158DRAFT_0570 0.52 +0.2
575,733 - B158DRAFT_0570 0.52 -0.5
575,733 - B158DRAFT_0570 0.52 -0.2
575,733 - B158DRAFT_0570 0.52 -0.3
575,733 - B158DRAFT_0570 0.52 -0.2
575,733 - B158DRAFT_0570 0.52 -0.1
575,733 - B158DRAFT_0570 0.52 -0.1
575,733 - B158DRAFT_0570 0.52 -1.1
575,733 - B158DRAFT_0570 0.52 -0.4
575,733 - B158DRAFT_0570 0.52 +0.2
575,733 - B158DRAFT_0570 0.52 -0.2
575,733 - B158DRAFT_0570 0.52 +0.3
575,759 - B158DRAFT_0570 0.55 -0.5
575,775 + B158DRAFT_0570 0.56 -0.4
575,792 + B158DRAFT_0570 0.58 +0.2
575,792 + B158DRAFT_0570 0.58 -0.2
575,800 - B158DRAFT_0570 0.59 -0.0
575,834 - B158DRAFT_0570 0.63 -0.6
575,837 - B158DRAFT_0570 0.63 -0.0
575,896 + B158DRAFT_0570 0.69 -0.3
575,896 + B158DRAFT_0570 0.69 -0.9
575,899 - B158DRAFT_0570 0.69 -0.4
575,951 + B158DRAFT_0570 0.75 -0.1

Or see this region's nucleotide sequence