Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0567

Experiment: m.b. Paraquat dichloride 0.0078125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0566 and B158DRAFT_0567 overlap by 1 nucleotidesB158DRAFT_0567 and B158DRAFT_0568 are separated by 88 nucleotidesB158DRAFT_0568 and B158DRAFT_0569 overlap by 32 nucleotides B158DRAFT_0566: B158DRAFT_0566 - ATP-dependent DNA helicase RecG (EC 3.6.1.-), at 569,822 to 571,924 _0566 B158DRAFT_0567: B158DRAFT_0567 - Transcriptional regulator, at 571,924 to 572,841 _0567 B158DRAFT_0568: B158DRAFT_0568 - Rhodanese-like domain/Tellurite resistance protein TehB, at 572,930 to 573,766 _0568 B158DRAFT_0569: B158DRAFT_0569 - Predicted membrane protein, at 573,735 to 574,958 _0569 Position (kb) 571 572 573Strain fitness (log2 ratio) -1 0 1 2at 570.944 kb on + strand, within B158DRAFT_0566at 570.963 kb on - strand, within B158DRAFT_0566at 570.969 kb on + strand, within B158DRAFT_0566at 570.970 kb on - strand, within B158DRAFT_0566at 570.970 kb on - strand, within B158DRAFT_0566at 570.999 kb on - strand, within B158DRAFT_0566at 571.030 kb on + strand, within B158DRAFT_0566at 571.045 kb on + strand, within B158DRAFT_0566at 571.111 kb on - strand, within B158DRAFT_0566at 571.156 kb on + strand, within B158DRAFT_0566at 571.238 kb on + strand, within B158DRAFT_0566at 571.273 kb on + strand, within B158DRAFT_0566at 571.304 kb on + strand, within B158DRAFT_0566at 571.322 kb on - strand, within B158DRAFT_0566at 571.330 kb on + strand, within B158DRAFT_0566at 571.338 kb on - strand, within B158DRAFT_0566at 571.414 kb on + strand, within B158DRAFT_0566at 571.432 kb on - strand, within B158DRAFT_0566at 571.480 kb on + strand, within B158DRAFT_0566at 571.480 kb on + strand, within B158DRAFT_0566at 571.480 kb on + strand, within B158DRAFT_0566at 571.480 kb on + strand, within B158DRAFT_0566at 571.488 kb on - strand, within B158DRAFT_0566at 571.488 kb on - strand, within B158DRAFT_0566at 571.510 kb on + strand, within B158DRAFT_0566at 571.513 kb on - strand, within B158DRAFT_0566at 571.518 kb on - strand, within B158DRAFT_0566at 571.518 kb on - strand, within B158DRAFT_0566at 571.552 kb on - strand, within B158DRAFT_0566at 571.571 kb on - strand, within B158DRAFT_0566at 571.777 kb on - strandat 571.779 kb on + strandat 571.802 kb on + strandat 571.934 kb on + strandat 571.935 kb on - strandat 571.935 kb on - strandat 572.122 kb on + strand, within B158DRAFT_0567at 572.196 kb on + strand, within B158DRAFT_0567at 572.204 kb on - strand, within B158DRAFT_0567at 572.221 kb on + strand, within B158DRAFT_0567at 572.229 kb on - strand, within B158DRAFT_0567at 572.340 kb on - strand, within B158DRAFT_0567at 572.344 kb on + strand, within B158DRAFT_0567at 572.350 kb on - strand, within B158DRAFT_0567at 572.378 kb on + strand, within B158DRAFT_0567at 572.456 kb on + strand, within B158DRAFT_0567at 572.456 kb on + strand, within B158DRAFT_0567at 572.464 kb on - strand, within B158DRAFT_0567at 572.473 kb on + strand, within B158DRAFT_0567at 572.482 kb on + strand, within B158DRAFT_0567at 572.537 kb on - strand, within B158DRAFT_0567at 572.604 kb on + strand, within B158DRAFT_0567at 572.613 kb on + strand, within B158DRAFT_0567at 572.622 kb on + strand, within B158DRAFT_0567at 572.667 kb on - strand, within B158DRAFT_0567at 572.667 kb on - strand, within B158DRAFT_0567at 572.703 kb on + strand, within B158DRAFT_0567at 572.703 kb on + strand, within B158DRAFT_0567at 572.703 kb on + strand, within B158DRAFT_0567at 572.703 kb on + strand, within B158DRAFT_0567at 572.703 kb on + strand, within B158DRAFT_0567at 572.703 kb on + strand, within B158DRAFT_0567at 572.703 kb on + strand, within B158DRAFT_0567at 572.711 kb on - strand, within B158DRAFT_0567at 572.711 kb on - strand, within B158DRAFT_0567at 572.711 kb on - strand, within B158DRAFT_0567at 572.711 kb on - strand, within B158DRAFT_0567at 572.711 kb on - strand, within B158DRAFT_0567at 572.711 kb on - strand, within B158DRAFT_0567at 572.747 kb on + strand, within B158DRAFT_0567at 572.778 kb on - strandat 572.904 kb on - strandat 572.962 kb on - strandat 573.106 kb on - strand, within B158DRAFT_0568at 573.134 kb on - strand, within B158DRAFT_0568at 573.134 kb on - strand, within B158DRAFT_0568at 573.147 kb on - strand, within B158DRAFT_0568at 573.176 kb on + strand, within B158DRAFT_0568at 573.176 kb on + strand, within B158DRAFT_0568at 573.223 kb on + strand, within B158DRAFT_0568at 573.269 kb on - strand, within B158DRAFT_0568at 573.334 kb on + strand, within B158DRAFT_0568at 573.365 kb on + strand, within B158DRAFT_0568at 573.403 kb on + strand, within B158DRAFT_0568at 573.403 kb on + strand, within B158DRAFT_0568at 573.411 kb on - strand, within B158DRAFT_0568at 573.482 kb on + strand, within B158DRAFT_0568at 573.497 kb on - strand, within B158DRAFT_0568at 573.497 kb on - strand, within B158DRAFT_0568at 573.497 kb on - strand, within B158DRAFT_0568at 573.574 kb on - strand, within B158DRAFT_0568at 573.574 kb on - strand, within B158DRAFT_0568at 573.682 kb on + strand, within B158DRAFT_0568at 573.690 kb on - strandat 573.691 kb on - strandat 573.701 kb on + strandat 573.701 kb on + strandat 573.703 kb on + strandat 573.713 kb on + strandat 573.728 kb on + strandat 573.736 kb on - strandat 573.812 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.0078125 mg/ml
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570,944 + B158DRAFT_0566 0.53 -0.1
570,963 - B158DRAFT_0566 0.54 +0.4
570,969 + B158DRAFT_0566 0.55 -0.4
570,970 - B158DRAFT_0566 0.55 +1.1
570,970 - B158DRAFT_0566 0.55 -0.0
570,999 - B158DRAFT_0566 0.56 +0.5
571,030 + B158DRAFT_0566 0.57 +0.1
571,045 + B158DRAFT_0566 0.58 +0.1
571,111 - B158DRAFT_0566 0.61 +0.3
571,156 + B158DRAFT_0566 0.63 +0.4
571,238 + B158DRAFT_0566 0.67 +0.2
571,273 + B158DRAFT_0566 0.69 +0.3
571,304 + B158DRAFT_0566 0.70 -0.4
571,322 - B158DRAFT_0566 0.71 +0.1
571,330 + B158DRAFT_0566 0.72 -0.3
571,338 - B158DRAFT_0566 0.72 -0.0
571,414 + B158DRAFT_0566 0.76 -0.4
571,432 - B158DRAFT_0566 0.77 +1.6
571,480 + B158DRAFT_0566 0.79 +0.4
571,480 + B158DRAFT_0566 0.79 +0.6
571,480 + B158DRAFT_0566 0.79 +0.1
571,480 + B158DRAFT_0566 0.79 +0.4
571,488 - B158DRAFT_0566 0.79 +0.8
571,488 - B158DRAFT_0566 0.79 +0.5
571,510 + B158DRAFT_0566 0.80 +0.8
571,513 - B158DRAFT_0566 0.80 +0.1
571,518 - B158DRAFT_0566 0.81 -0.1
571,518 - B158DRAFT_0566 0.81 +0.3
571,552 - B158DRAFT_0566 0.82 -0.1
571,571 - B158DRAFT_0566 0.83 +0.8
571,777 - -0.3
571,779 + +0.1
571,802 + +0.6
571,934 + +0.5
571,935 - +0.3
571,935 - +0.3
572,122 + B158DRAFT_0567 0.22 +0.0
572,196 + B158DRAFT_0567 0.30 +0.5
572,204 - B158DRAFT_0567 0.31 +0.8
572,221 + B158DRAFT_0567 0.32 +0.1
572,229 - B158DRAFT_0567 0.33 -0.1
572,340 - B158DRAFT_0567 0.45 +1.7
572,344 + B158DRAFT_0567 0.46 +0.9
572,350 - B158DRAFT_0567 0.46 -0.2
572,378 + B158DRAFT_0567 0.49 +0.7
572,456 + B158DRAFT_0567 0.58 +0.2
572,456 + B158DRAFT_0567 0.58 +0.6
572,464 - B158DRAFT_0567 0.59 -0.8
572,473 + B158DRAFT_0567 0.60 +0.1
572,482 + B158DRAFT_0567 0.61 +0.5
572,537 - B158DRAFT_0567 0.67 +0.2
572,604 + B158DRAFT_0567 0.74 +1.9
572,613 + B158DRAFT_0567 0.75 -0.0
572,622 + B158DRAFT_0567 0.76 +0.8
572,667 - B158DRAFT_0567 0.81 +0.3
572,667 - B158DRAFT_0567 0.81 -0.4
572,703 + B158DRAFT_0567 0.85 +1.5
572,703 + B158DRAFT_0567 0.85 -0.1
572,703 + B158DRAFT_0567 0.85 +0.0
572,703 + B158DRAFT_0567 0.85 +0.5
572,703 + B158DRAFT_0567 0.85 -0.0
572,703 + B158DRAFT_0567 0.85 +0.0
572,703 + B158DRAFT_0567 0.85 -0.2
572,711 - B158DRAFT_0567 0.86 +0.6
572,711 - B158DRAFT_0567 0.86 -0.1
572,711 - B158DRAFT_0567 0.86 +0.1
572,711 - B158DRAFT_0567 0.86 -0.1
572,711 - B158DRAFT_0567 0.86 +0.1
572,711 - B158DRAFT_0567 0.86 -0.4
572,747 + B158DRAFT_0567 0.90 +0.4
572,778 - +0.1
572,904 - -0.7
572,962 - -0.3
573,106 - B158DRAFT_0568 0.21 +0.3
573,134 - B158DRAFT_0568 0.24 +1.1
573,134 - B158DRAFT_0568 0.24 -0.7
573,147 - B158DRAFT_0568 0.26 -0.4
573,176 + B158DRAFT_0568 0.29 -0.2
573,176 + B158DRAFT_0568 0.29 +0.2
573,223 + B158DRAFT_0568 0.35 -0.7
573,269 - B158DRAFT_0568 0.41 -0.3
573,334 + B158DRAFT_0568 0.48 -0.8
573,365 + B158DRAFT_0568 0.52 -0.5
573,403 + B158DRAFT_0568 0.57 -0.1
573,403 + B158DRAFT_0568 0.57 -0.1
573,411 - B158DRAFT_0568 0.57 -0.5
573,482 + B158DRAFT_0568 0.66 -0.1
573,497 - B158DRAFT_0568 0.68 -0.1
573,497 - B158DRAFT_0568 0.68 -1.0
573,497 - B158DRAFT_0568 0.68 -0.2
573,574 - B158DRAFT_0568 0.77 -0.1
573,574 - B158DRAFT_0568 0.77 -0.3
573,682 + B158DRAFT_0568 0.90 -0.7
573,690 - -0.4
573,691 - -0.0
573,701 + +0.1
573,701 + -0.1
573,703 + -1.0
573,713 + -0.1
573,728 + +0.2
573,736 - -0.2
573,812 + -0.1

Or see this region's nucleotide sequence