Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0306

Experiment: m.b. Paraquat dichloride 0.0078125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0305 and B158DRAFT_0306 are separated by 95 nucleotidesB158DRAFT_0306 and B158DRAFT_0307 are separated by 29 nucleotidesB158DRAFT_0307 and B158DRAFT_0308 are separated by 82 nucleotides B158DRAFT_0305: B158DRAFT_0305 - ATPase, P-type (transporting), HAD superfamily, subfamily IC, at 309,239 to 311,950 _0305 B158DRAFT_0306: B158DRAFT_0306 - Predicted flavoprotein, at 312,046 to 312,705 _0306 B158DRAFT_0307: B158DRAFT_0307 - hypothetical protein, at 312,735 to 313,187 _0307 B158DRAFT_0308: B158DRAFT_0308 - phenazine biosynthesis protein PhzF family, at 313,270 to 314,061 _0308 Position (kb) 312 313Strain fitness (log2 ratio) -2 -1 0 1 2 3at 311.222 kb on - strand, within B158DRAFT_0305at 311.286 kb on + strand, within B158DRAFT_0305at 311.319 kb on + strand, within B158DRAFT_0305at 311.320 kb on - strand, within B158DRAFT_0305at 311.375 kb on + strand, within B158DRAFT_0305at 311.375 kb on + strand, within B158DRAFT_0305at 311.390 kb on + strand, within B158DRAFT_0305at 311.400 kb on + strand, within B158DRAFT_0305at 311.556 kb on - strand, within B158DRAFT_0305at 311.571 kb on + strand, within B158DRAFT_0305at 311.579 kb on - strand, within B158DRAFT_0305at 311.579 kb on - strand, within B158DRAFT_0305at 311.579 kb on - strand, within B158DRAFT_0305at 311.758 kb on - strandat 311.819 kb on - strandat 311.854 kb on + strandat 311.861 kb on + strandat 311.862 kb on - strandat 311.862 kb on - strandat 311.862 kb on - strandat 311.862 kb on - strandat 311.870 kb on + strandat 311.870 kb on + strandat 311.870 kb on + strandat 311.870 kb on + strandat 311.878 kb on - strandat 311.878 kb on - strandat 311.878 kb on - strandat 311.880 kb on - strandat 311.885 kb on - strandat 311.954 kb on + strandat 311.961 kb on + strandat 311.994 kb on + strandat 311.995 kb on + strandat 312.002 kb on - strandat 312.058 kb on - strandat 312.128 kb on - strand, within B158DRAFT_0306at 312.155 kb on + strand, within B158DRAFT_0306at 312.184 kb on + strand, within B158DRAFT_0306at 312.267 kb on + strand, within B158DRAFT_0306at 312.277 kb on + strand, within B158DRAFT_0306at 312.277 kb on + strand, within B158DRAFT_0306at 312.285 kb on - strand, within B158DRAFT_0306at 312.285 kb on - strand, within B158DRAFT_0306at 312.328 kb on + strand, within B158DRAFT_0306at 312.328 kb on + strand, within B158DRAFT_0306at 312.336 kb on - strand, within B158DRAFT_0306at 312.338 kb on + strand, within B158DRAFT_0306at 312.338 kb on + strand, within B158DRAFT_0306at 312.346 kb on - strand, within B158DRAFT_0306at 312.363 kb on + strand, within B158DRAFT_0306at 312.375 kb on + strand, within B158DRAFT_0306at 312.375 kb on + strand, within B158DRAFT_0306at 312.383 kb on - strand, within B158DRAFT_0306at 312.411 kb on - strand, within B158DRAFT_0306at 312.427 kb on - strand, within B158DRAFT_0306at 312.435 kb on + strand, within B158DRAFT_0306at 312.435 kb on + strand, within B158DRAFT_0306at 312.435 kb on + strand, within B158DRAFT_0306at 312.443 kb on - strand, within B158DRAFT_0306at 312.443 kb on - strand, within B158DRAFT_0306at 312.445 kb on + strand, within B158DRAFT_0306at 312.453 kb on - strand, within B158DRAFT_0306at 312.512 kb on + strand, within B158DRAFT_0306at 312.566 kb on + strand, within B158DRAFT_0306at 312.576 kb on + strand, within B158DRAFT_0306at 312.576 kb on + strand, within B158DRAFT_0306at 312.596 kb on - strand, within B158DRAFT_0306at 312.648 kb on + strandat 312.653 kb on + strandat 312.653 kb on + strandat 312.653 kb on + strandat 312.653 kb on + strandat 312.660 kb on - strandat 312.661 kb on - strandat 312.661 kb on - strandat 312.661 kb on - strandat 312.670 kb on + strandat 312.670 kb on + strandat 312.670 kb on + strandat 312.670 kb on + strandat 312.670 kb on + strandat 312.670 kb on + strandat 312.670 kb on + strandat 312.670 kb on + strandat 312.678 kb on - strandat 312.678 kb on - strandat 312.678 kb on - strandat 312.678 kb on - strandat 312.700 kb on - strandat 312.765 kb on + strandat 312.829 kb on - strand, within B158DRAFT_0307at 312.829 kb on - strand, within B158DRAFT_0307at 312.858 kb on - strand, within B158DRAFT_0307at 312.863 kb on - strand, within B158DRAFT_0307at 312.864 kb on - strand, within B158DRAFT_0307at 312.929 kb on + strand, within B158DRAFT_0307at 312.937 kb on - strand, within B158DRAFT_0307at 312.953 kb on + strand, within B158DRAFT_0307at 313.126 kb on - strand, within B158DRAFT_0307at 313.126 kb on - strand, within B158DRAFT_0307at 313.196 kb on + strandat 313.204 kb on - strandat 313.204 kb on - strandat 313.294 kb on + strandat 313.297 kb on + strandat 313.299 kb on + strandat 313.302 kb on - strandat 313.302 kb on - strandat 313.302 kb on - strandat 313.302 kb on - strandat 313.350 kb on + strand, within B158DRAFT_0308at 313.358 kb on - strand, within B158DRAFT_0308at 313.394 kb on - strand, within B158DRAFT_0308at 313.473 kb on - strand, within B158DRAFT_0308at 313.578 kb on + strand, within B158DRAFT_0308at 313.578 kb on + strand, within B158DRAFT_0308at 313.586 kb on - strand, within B158DRAFT_0308at 313.618 kb on - strand, within B158DRAFT_0308at 313.627 kb on + strand, within B158DRAFT_0308at 313.664 kb on + strand, within B158DRAFT_0308

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.0078125 mg/ml
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311,222 - B158DRAFT_0305 0.73 -0.1
311,286 + B158DRAFT_0305 0.75 -1.0
311,319 + B158DRAFT_0305 0.77 +0.5
311,320 - B158DRAFT_0305 0.77 -0.5
311,375 + B158DRAFT_0305 0.79 -0.9
311,375 + B158DRAFT_0305 0.79 -0.0
311,390 + B158DRAFT_0305 0.79 -0.4
311,400 + B158DRAFT_0305 0.80 +0.0
311,556 - B158DRAFT_0305 0.85 +0.7
311,571 + B158DRAFT_0305 0.86 +0.2
311,579 - B158DRAFT_0305 0.86 +0.1
311,579 - B158DRAFT_0305 0.86 -0.2
311,579 - B158DRAFT_0305 0.86 -1.2
311,758 - +0.7
311,819 - +0.1
311,854 + -0.0
311,861 + -0.4
311,862 - -0.4
311,862 - -2.4
311,862 - +0.1
311,862 - +0.1
311,870 + -0.2
311,870 + +0.8
311,870 + -0.1
311,870 + -0.6
311,878 - -0.2
311,878 - -0.7
311,878 - +1.6
311,880 - +0.9
311,885 - -0.5
311,954 + -0.2
311,961 + -0.9
311,994 + -0.2
311,995 + -0.2
312,002 - +0.5
312,058 - +0.2
312,128 - B158DRAFT_0306 0.12 +0.0
312,155 + B158DRAFT_0306 0.17 +0.7
312,184 + B158DRAFT_0306 0.21 +3.3
312,267 + B158DRAFT_0306 0.33 +0.2
312,277 + B158DRAFT_0306 0.35 +0.2
312,277 + B158DRAFT_0306 0.35 -0.2
312,285 - B158DRAFT_0306 0.36 -0.3
312,285 - B158DRAFT_0306 0.36 +0.6
312,328 + B158DRAFT_0306 0.43 +0.5
312,328 + B158DRAFT_0306 0.43 +0.2
312,336 - B158DRAFT_0306 0.44 -0.3
312,338 + B158DRAFT_0306 0.44 -0.4
312,338 + B158DRAFT_0306 0.44 -0.6
312,346 - B158DRAFT_0306 0.45 +0.6
312,363 + B158DRAFT_0306 0.48 +0.1
312,375 + B158DRAFT_0306 0.50 +0.2
312,375 + B158DRAFT_0306 0.50 -0.2
312,383 - B158DRAFT_0306 0.51 -0.1
312,411 - B158DRAFT_0306 0.55 -0.2
312,427 - B158DRAFT_0306 0.58 +0.6
312,435 + B158DRAFT_0306 0.59 -0.8
312,435 + B158DRAFT_0306 0.59 -0.1
312,435 + B158DRAFT_0306 0.59 +0.2
312,443 - B158DRAFT_0306 0.60 +1.3
312,443 - B158DRAFT_0306 0.60 +0.2
312,445 + B158DRAFT_0306 0.60 +0.3
312,453 - B158DRAFT_0306 0.62 +0.0
312,512 + B158DRAFT_0306 0.71 -0.2
312,566 + B158DRAFT_0306 0.79 -0.1
312,576 + B158DRAFT_0306 0.80 -0.6
312,576 + B158DRAFT_0306 0.80 -0.3
312,596 - B158DRAFT_0306 0.83 +0.3
312,648 + +0.3
312,653 + +0.1
312,653 + -0.3
312,653 + +0.4
312,653 + +1.3
312,660 - -0.1
312,661 - -0.4
312,661 - +0.0
312,661 - -0.2
312,670 + +0.7
312,670 + -0.0
312,670 + -0.1
312,670 + -0.9
312,670 + +0.1
312,670 + -0.7
312,670 + +0.9
312,670 + -0.5
312,678 - -0.1
312,678 - +0.2
312,678 - +0.7
312,678 - -1.0
312,700 - +0.0
312,765 + -0.2
312,829 - B158DRAFT_0307 0.21 -0.1
312,829 - B158DRAFT_0307 0.21 -0.3
312,858 - B158DRAFT_0307 0.27 -0.4
312,863 - B158DRAFT_0307 0.28 +0.5
312,864 - B158DRAFT_0307 0.28 -0.3
312,929 + B158DRAFT_0307 0.43 -0.4
312,937 - B158DRAFT_0307 0.45 -0.1
312,953 + B158DRAFT_0307 0.48 -0.5
313,126 - B158DRAFT_0307 0.86 -0.2
313,126 - B158DRAFT_0307 0.86 -1.7
313,196 + -0.4
313,204 - -0.9
313,204 - -0.8
313,294 + -0.5
313,297 + +0.4
313,299 + -0.2
313,302 - +0.4
313,302 - -0.4
313,302 - +0.3
313,302 - +0.2
313,350 + B158DRAFT_0308 0.10 -0.8
313,358 - B158DRAFT_0308 0.11 +0.2
313,394 - B158DRAFT_0308 0.16 -0.8
313,473 - B158DRAFT_0308 0.26 -0.3
313,578 + B158DRAFT_0308 0.39 -0.8
313,578 + B158DRAFT_0308 0.39 -0.4
313,586 - B158DRAFT_0308 0.40 +0.7
313,618 - B158DRAFT_0308 0.44 -0.2
313,627 + B158DRAFT_0308 0.45 -0.0
313,664 + B158DRAFT_0308 0.50 +0.1

Or see this region's nucleotide sequence