Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0147

Experiment: m.b. Paraquat dichloride 0.0078125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0145 and B158DRAFT_0146 are separated by 47 nucleotidesB158DRAFT_0146 and B158DRAFT_0147 are separated by 160 nucleotidesB158DRAFT_0147 and B158DRAFT_0148 are separated by 67 nucleotidesB158DRAFT_0148 and B158DRAFT_0149 are separated by 222 nucleotides B158DRAFT_0145: B158DRAFT_0145 - chaperonin GroL, at 143,543 to 145,183 _0145 B158DRAFT_0146: B158DRAFT_0146 - Co-chaperonin GroES (HSP10), at 145,231 to 145,521 _0146 B158DRAFT_0147: B158DRAFT_0147 - Protein affecting phage T7 exclusion by the F plasmid, at 145,682 to 146,206 _0147 B158DRAFT_0148: B158DRAFT_0148 - Uncharacterized protein involved in tolerance to divalent cations, at 146,274 to 146,627 _0148 B158DRAFT_0149: B158DRAFT_0149 - Thiol-disulfide isomerase and thioredoxins, at 146,850 to 147,386 _0149 Position (kb) 145 146 147Strain fitness (log2 ratio) -2 -1 0 1at 145.630 kb on + strandat 145.632 kb on + strandat 145.745 kb on + strand, within B158DRAFT_0147at 145.784 kb on - strand, within B158DRAFT_0147at 145.818 kb on + strand, within B158DRAFT_0147at 145.826 kb on - strand, within B158DRAFT_0147at 145.860 kb on + strand, within B158DRAFT_0147at 145.880 kb on - strand, within B158DRAFT_0147at 145.900 kb on + strand, within B158DRAFT_0147at 145.900 kb on + strand, within B158DRAFT_0147at 145.937 kb on + strand, within B158DRAFT_0147at 146.003 kb on + strand, within B158DRAFT_0147at 146.054 kb on - strand, within B158DRAFT_0147at 146.054 kb on - strand, within B158DRAFT_0147at 146.054 kb on - strand, within B158DRAFT_0147at 146.101 kb on + strand, within B158DRAFT_0147at 146.101 kb on + strand, within B158DRAFT_0147at 146.109 kb on - strand, within B158DRAFT_0147at 146.310 kb on + strand, within B158DRAFT_0148at 146.310 kb on + strand, within B158DRAFT_0148at 146.310 kb on + strand, within B158DRAFT_0148at 146.323 kb on - strand, within B158DRAFT_0148at 146.341 kb on - strand, within B158DRAFT_0148at 146.372 kb on + strand, within B158DRAFT_0148at 146.416 kb on - strand, within B158DRAFT_0148at 146.522 kb on + strand, within B158DRAFT_0148at 146.577 kb on - strand, within B158DRAFT_0148at 146.579 kb on + strand, within B158DRAFT_0148at 146.593 kb on + strandat 146.601 kb on - strandat 146.629 kb on - strandat 146.658 kb on + strandat 146.663 kb on + strandat 146.794 kb on + strandat 146.794 kb on + strandat 146.848 kb on - strandat 146.868 kb on - strandat 146.870 kb on + strandat 146.883 kb on - strandat 146.883 kb on - strandat 146.940 kb on + strand, within B158DRAFT_0149at 146.963 kb on + strand, within B158DRAFT_0149at 146.976 kb on - strand, within B158DRAFT_0149at 146.982 kb on - strand, within B158DRAFT_0149at 147.012 kb on + strand, within B158DRAFT_0149at 147.019 kb on + strand, within B158DRAFT_0149at 147.058 kb on - strand, within B158DRAFT_0149at 147.068 kb on + strand, within B158DRAFT_0149at 147.144 kb on + strand, within B158DRAFT_0149at 147.195 kb on + strand, within B158DRAFT_0149

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.0078125 mg/ml
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145,630 + -0.6
145,632 + -0.2
145,745 + B158DRAFT_0147 0.12 -0.6
145,784 - B158DRAFT_0147 0.19 -0.8
145,818 + B158DRAFT_0147 0.26 -1.3
145,826 - B158DRAFT_0147 0.27 -0.8
145,860 + B158DRAFT_0147 0.34 -0.7
145,880 - B158DRAFT_0147 0.38 -0.5
145,900 + B158DRAFT_0147 0.42 -0.5
145,900 + B158DRAFT_0147 0.42 -0.3
145,937 + B158DRAFT_0147 0.49 -1.4
146,003 + B158DRAFT_0147 0.61 -1.4
146,054 - B158DRAFT_0147 0.71 -0.9
146,054 - B158DRAFT_0147 0.71 -2.0
146,054 - B158DRAFT_0147 0.71 -1.1
146,101 + B158DRAFT_0147 0.80 -1.1
146,101 + B158DRAFT_0147 0.80 -2.1
146,109 - B158DRAFT_0147 0.81 -0.6
146,310 + B158DRAFT_0148 0.10 -0.7
146,310 + B158DRAFT_0148 0.10 -0.5
146,310 + B158DRAFT_0148 0.10 +0.4
146,323 - B158DRAFT_0148 0.14 +0.0
146,341 - B158DRAFT_0148 0.19 -2.0
146,372 + B158DRAFT_0148 0.28 -0.1
146,416 - B158DRAFT_0148 0.40 -0.1
146,522 + B158DRAFT_0148 0.70 +0.1
146,577 - B158DRAFT_0148 0.86 -0.2
146,579 + B158DRAFT_0148 0.86 -0.9
146,593 + -0.7
146,601 - +0.1
146,629 - -0.8
146,658 + -0.5
146,663 + +0.1
146,794 + +0.1
146,794 + -1.1
146,848 - -1.1
146,868 - -0.5
146,870 + -0.8
146,883 - -0.8
146,883 - +0.1
146,940 + B158DRAFT_0149 0.17 +0.4
146,963 + B158DRAFT_0149 0.21 +0.4
146,976 - B158DRAFT_0149 0.23 -0.4
146,982 - B158DRAFT_0149 0.25 -0.1
147,012 + B158DRAFT_0149 0.30 +0.4
147,019 + B158DRAFT_0149 0.31 -0.2
147,058 - B158DRAFT_0149 0.39 +0.3
147,068 + B158DRAFT_0149 0.41 -0.4
147,144 + B158DRAFT_0149 0.55 +0.1
147,195 + B158DRAFT_0149 0.64 -0.4

Or see this region's nucleotide sequence