Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0144

Experiment: m.b. Paraquat dichloride 0.0078125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0142 and B158DRAFT_0143 are separated by 0 nucleotidesB158DRAFT_0143 and B158DRAFT_0144 are separated by 72 nucleotidesB158DRAFT_0144 and B158DRAFT_0145 are separated by 288 nucleotides B158DRAFT_0142: B158DRAFT_0142 - ABC-type phosphate transport system, periplasmic component, at 140,357 to 141,736 _0142 B158DRAFT_0143: B158DRAFT_0143 - hypothetical protein, at 141,737 to 142,549 _0143 B158DRAFT_0144: B158DRAFT_0144 - Carbonic anhydrase, at 142,622 to 143,254 _0144 B158DRAFT_0145: B158DRAFT_0145 - chaperonin GroL, at 143,543 to 145,183 _0145 Position (kb) 142 143 144Strain fitness (log2 ratio) -2 -1 0 1at 141.624 kb on + strandat 141.641 kb on + strandat 141.649 kb on - strandat 141.776 kb on + strandat 141.776 kb on + strandat 141.784 kb on - strandat 141.836 kb on - strand, within B158DRAFT_0143at 141.836 kb on - strand, within B158DRAFT_0143at 141.892 kb on + strand, within B158DRAFT_0143at 141.900 kb on - strand, within B158DRAFT_0143at 141.995 kb on + strand, within B158DRAFT_0143at 142.110 kb on - strand, within B158DRAFT_0143at 142.112 kb on + strand, within B158DRAFT_0143at 142.118 kb on - strand, within B158DRAFT_0143at 142.123 kb on - strand, within B158DRAFT_0143at 142.130 kb on - strand, within B158DRAFT_0143at 142.139 kb on + strand, within B158DRAFT_0143at 142.205 kb on + strand, within B158DRAFT_0143at 142.213 kb on - strand, within B158DRAFT_0143at 142.307 kb on - strand, within B158DRAFT_0143at 142.416 kb on + strand, within B158DRAFT_0143at 142.487 kb on + strandat 142.611 kb on - strandat 142.726 kb on - strand, within B158DRAFT_0144at 142.728 kb on + strand, within B158DRAFT_0144at 142.736 kb on - strand, within B158DRAFT_0144at 142.736 kb on - strand, within B158DRAFT_0144at 142.762 kb on - strand, within B158DRAFT_0144at 142.839 kb on + strand, within B158DRAFT_0144at 142.868 kb on - strand, within B158DRAFT_0144at 142.938 kb on + strand, within B158DRAFT_0144at 142.947 kb on - strand, within B158DRAFT_0144at 142.994 kb on + strand, within B158DRAFT_0144at 142.996 kb on + strand, within B158DRAFT_0144at 143.156 kb on + strand, within B158DRAFT_0144at 143.164 kb on - strand, within B158DRAFT_0144at 143.164 kb on - strand, within B158DRAFT_0144at 143.219 kb on - strandat 143.331 kb on + strandat 143.382 kb on + strandat 143.400 kb on + strandat 143.400 kb on + strandat 143.408 kb on - strandat 143.491 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.0078125 mg/ml
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141,624 + -0.3
141,641 + +0.1
141,649 - -0.9
141,776 + -0.3
141,776 + -1.6
141,784 - -0.2
141,836 - B158DRAFT_0143 0.12 +0.0
141,836 - B158DRAFT_0143 0.12 -0.3
141,892 + B158DRAFT_0143 0.19 -0.7
141,900 - B158DRAFT_0143 0.20 +0.0
141,995 + B158DRAFT_0143 0.32 -0.8
142,110 - B158DRAFT_0143 0.46 -1.5
142,112 + B158DRAFT_0143 0.46 +0.1
142,118 - B158DRAFT_0143 0.47 +0.8
142,123 - B158DRAFT_0143 0.47 -1.9
142,130 - B158DRAFT_0143 0.48 +0.7
142,139 + B158DRAFT_0143 0.49 -0.1
142,205 + B158DRAFT_0143 0.58 -0.3
142,213 - B158DRAFT_0143 0.59 -0.0
142,307 - B158DRAFT_0143 0.70 +0.1
142,416 + B158DRAFT_0143 0.84 -0.2
142,487 + +0.0
142,611 - -0.8
142,726 - B158DRAFT_0144 0.16 -0.1
142,728 + B158DRAFT_0144 0.17 -0.0
142,736 - B158DRAFT_0144 0.18 +0.1
142,736 - B158DRAFT_0144 0.18 -0.1
142,762 - B158DRAFT_0144 0.22 -0.2
142,839 + B158DRAFT_0144 0.34 +0.5
142,868 - B158DRAFT_0144 0.39 -1.2
142,938 + B158DRAFT_0144 0.50 +0.3
142,947 - B158DRAFT_0144 0.51 -0.1
142,994 + B158DRAFT_0144 0.59 +0.0
142,996 + B158DRAFT_0144 0.59 -0.4
143,156 + B158DRAFT_0144 0.84 +0.5
143,164 - B158DRAFT_0144 0.86 -0.2
143,164 - B158DRAFT_0144 0.86 -0.9
143,219 - +0.2
143,331 + -0.7
143,382 + -0.1
143,400 + -0.3
143,400 + -0.1
143,408 - -0.2
143,491 - +0.3

Or see this region's nucleotide sequence