Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2446

Experiment: m.b. methylglyoxal 0.005 vol%

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_2445 and B158DRAFT_2446 overlap by 14 nucleotidesB158DRAFT_2446 and B158DRAFT_2447 are separated by 20 nucleotides B158DRAFT_2445: B158DRAFT_2445 - Beta-barrel assembly machine subunit BamC, at 617,836 to 618,918 _2445 B158DRAFT_2446: B158DRAFT_2446 - Metal-dependent hydrolases of the beta-lactamase superfamily I, at 618,905 to 619,714 _2446 B158DRAFT_2447: B158DRAFT_2447 - Signal transduction histidine kinase, at 619,735 to 621,105 _2447 Position (kb) 618 619 620Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 617.931 kb on + strandat 617.931 kb on + strandat 617.931 kb on + strandat 617.939 kb on - strandat 617.939 kb on - strandat 617.995 kb on + strand, within B158DRAFT_2445at 617.998 kb on - strand, within B158DRAFT_2445at 618.072 kb on + strand, within B158DRAFT_2445at 618.091 kb on + strand, within B158DRAFT_2445at 618.128 kb on + strand, within B158DRAFT_2445at 618.138 kb on + strand, within B158DRAFT_2445at 618.151 kb on + strand, within B158DRAFT_2445at 618.239 kb on + strand, within B158DRAFT_2445at 618.274 kb on + strand, within B158DRAFT_2445at 618.324 kb on + strand, within B158DRAFT_2445at 618.332 kb on + strand, within B158DRAFT_2445at 618.332 kb on + strand, within B158DRAFT_2445at 618.332 kb on + strand, within B158DRAFT_2445at 618.332 kb on + strand, within B158DRAFT_2445at 618.338 kb on + strand, within B158DRAFT_2445at 618.340 kb on - strand, within B158DRAFT_2445at 618.340 kb on - strand, within B158DRAFT_2445at 618.340 kb on - strand, within B158DRAFT_2445at 618.340 kb on - strand, within B158DRAFT_2445at 618.374 kb on + strand, within B158DRAFT_2445at 618.376 kb on + strand, within B158DRAFT_2445at 618.396 kb on + strand, within B158DRAFT_2445at 618.409 kb on + strandat 618.438 kb on + strand, within B158DRAFT_2445at 618.479 kb on + strand, within B158DRAFT_2445at 618.483 kb on + strand, within B158DRAFT_2445at 618.506 kb on - strand, within B158DRAFT_2445at 618.521 kb on + strand, within B158DRAFT_2445at 618.549 kb on + strand, within B158DRAFT_2445at 618.554 kb on + strand, within B158DRAFT_2445at 618.557 kb on - strand, within B158DRAFT_2445at 618.562 kb on - strand, within B158DRAFT_2445at 618.645 kb on - strand, within B158DRAFT_2445at 618.645 kb on - strand, within B158DRAFT_2445at 618.645 kb on - strand, within B158DRAFT_2445at 618.761 kb on + strand, within B158DRAFT_2445at 618.813 kb on + strandat 618.813 kb on + strandat 618.822 kb on - strandat 618.958 kb on - strandat 619.025 kb on + strand, within B158DRAFT_2446at 619.165 kb on - strand, within B158DRAFT_2446at 619.227 kb on - strand, within B158DRAFT_2446at 619.250 kb on - strand, within B158DRAFT_2446at 619.322 kb on - strand, within B158DRAFT_2446at 619.429 kb on + strand, within B158DRAFT_2446at 619.434 kb on + strand, within B158DRAFT_2446at 619.435 kb on + strand, within B158DRAFT_2446at 619.442 kb on - strand, within B158DRAFT_2446at 619.443 kb on - strand, within B158DRAFT_2446at 619.449 kb on + strand, within B158DRAFT_2446at 619.449 kb on + strand, within B158DRAFT_2446at 619.449 kb on + strand, within B158DRAFT_2446at 619.457 kb on - strand, within B158DRAFT_2446at 619.459 kb on - strand, within B158DRAFT_2446at 619.481 kb on - strand, within B158DRAFT_2446at 619.481 kb on - strand, within B158DRAFT_2446at 619.519 kb on + strand, within B158DRAFT_2446at 619.556 kb on + strand, within B158DRAFT_2446at 619.578 kb on + strand, within B158DRAFT_2446at 619.586 kb on - strand, within B158DRAFT_2446at 619.586 kb on - strand, within B158DRAFT_2446at 619.586 kb on - strand, within B158DRAFT_2446at 619.611 kb on - strand, within B158DRAFT_2446at 619.618 kb on - strand, within B158DRAFT_2446at 619.659 kb on - strandat 619.659 kb on - strandat 619.731 kb on + strandat 619.738 kb on + strandat 619.802 kb on - strandat 619.826 kb on + strandat 619.826 kb on + strandat 619.829 kb on - strandat 619.877 kb on + strand, within B158DRAFT_2447at 619.877 kb on + strand, within B158DRAFT_2447at 619.883 kb on + strand, within B158DRAFT_2447at 619.885 kb on - strand, within B158DRAFT_2447at 620.016 kb on + strand, within B158DRAFT_2447at 620.047 kb on + strand, within B158DRAFT_2447at 620.100 kb on - strand, within B158DRAFT_2447at 620.130 kb on + strand, within B158DRAFT_2447at 620.130 kb on + strand, within B158DRAFT_2447at 620.140 kb on + strand, within B158DRAFT_2447at 620.140 kb on + strand, within B158DRAFT_2447at 620.140 kb on + strand, within B158DRAFT_2447at 620.140 kb on + strand, within B158DRAFT_2447at 620.140 kb on + strand, within B158DRAFT_2447at 620.141 kb on - strand, within B158DRAFT_2447at 620.148 kb on - strand, within B158DRAFT_2447at 620.187 kb on - strand, within B158DRAFT_2447at 620.214 kb on + strand, within B158DRAFT_2447at 620.266 kb on + strand, within B158DRAFT_2447at 620.281 kb on + strand, within B158DRAFT_2447at 620.281 kb on + strand, within B158DRAFT_2447at 620.281 kb on + strand, within B158DRAFT_2447at 620.281 kb on + strand, within B158DRAFT_2447at 620.289 kb on - strand, within B158DRAFT_2447at 620.530 kb on + strand, within B158DRAFT_2447at 620.530 kb on + strand, within B158DRAFT_2447at 620.530 kb on + strand, within B158DRAFT_2447at 620.530 kb on + strand, within B158DRAFT_2447at 620.530 kb on + strand, within B158DRAFT_2447at 620.538 kb on - strand, within B158DRAFT_2447at 620.538 kb on - strand, within B158DRAFT_2447at 620.538 kb on - strand, within B158DRAFT_2447at 620.538 kb on - strand, within B158DRAFT_2447at 620.538 kb on - strand, within B158DRAFT_2447at 620.538 kb on - strand, within B158DRAFT_2447at 620.538 kb on - strand, within B158DRAFT_2447at 620.538 kb on - strand, within B158DRAFT_2447at 620.538 kb on - strand, within B158DRAFT_2447at 620.538 kb on - strand, within B158DRAFT_2447at 620.538 kb on - strand, within B158DRAFT_2447at 620.538 kb on - strand, within B158DRAFT_2447at 620.554 kb on + strand, within B158DRAFT_2447at 620.579 kb on + strand, within B158DRAFT_2447at 620.579 kb on + strand, within B158DRAFT_2447at 620.587 kb on - strand, within B158DRAFT_2447at 620.587 kb on - strand, within B158DRAFT_2447at 620.636 kb on + strand, within B158DRAFT_2447at 620.667 kb on + strand, within B158DRAFT_2447at 620.679 kb on + strand, within B158DRAFT_2447

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. methylglyoxal 0.005 vol%
remove
617,931 + +0.6
617,931 + +0.5
617,931 + +1.8
617,939 - -3.4
617,939 - +3.4
617,995 + B158DRAFT_2445 0.15 +1.1
617,998 - B158DRAFT_2445 0.15 +1.9
618,072 + B158DRAFT_2445 0.22 +1.5
618,091 + B158DRAFT_2445 0.24 +1.3
618,128 + B158DRAFT_2445 0.27 +1.6
618,138 + B158DRAFT_2445 0.28 +2.5
618,151 + B158DRAFT_2445 0.29 +2.1
618,239 + B158DRAFT_2445 0.37 +1.8
618,274 + B158DRAFT_2445 0.40 +2.3
618,324 + B158DRAFT_2445 0.45 +1.8
618,332 + B158DRAFT_2445 0.46 +1.4
618,332 + B158DRAFT_2445 0.46 +1.3
618,332 + B158DRAFT_2445 0.46 +1.4
618,332 + B158DRAFT_2445 0.46 +2.6
618,338 + B158DRAFT_2445 0.46 +2.1
618,340 - B158DRAFT_2445 0.47 +2.5
618,340 - B158DRAFT_2445 0.47 +2.8
618,340 - B158DRAFT_2445 0.47 +1.1
618,340 - B158DRAFT_2445 0.47 +2.3
618,374 + B158DRAFT_2445 0.50 +1.9
618,376 + B158DRAFT_2445 0.50 +1.7
618,396 + B158DRAFT_2445 0.52 +0.9
618,409 + +1.2
618,438 + B158DRAFT_2445 0.56 +0.4
618,479 + B158DRAFT_2445 0.59 +2.9
618,483 + B158DRAFT_2445 0.60 +2.3
618,506 - B158DRAFT_2445 0.62 +3.2
618,521 + B158DRAFT_2445 0.63 +2.0
618,549 + B158DRAFT_2445 0.66 +2.5
618,554 + B158DRAFT_2445 0.66 +1.5
618,557 - B158DRAFT_2445 0.67 +3.2
618,562 - B158DRAFT_2445 0.67 +2.6
618,645 - B158DRAFT_2445 0.75 +3.0
618,645 - B158DRAFT_2445 0.75 +2.9
618,645 - B158DRAFT_2445 0.75 +2.6
618,761 + B158DRAFT_2445 0.85 +2.6
618,813 + +2.5
618,813 + +2.2
618,822 - +2.1
618,958 - +3.1
619,025 + B158DRAFT_2446 0.15 +2.7
619,165 - B158DRAFT_2446 0.32 +3.6
619,227 - B158DRAFT_2446 0.40 +3.9
619,250 - B158DRAFT_2446 0.43 +2.9
619,322 - B158DRAFT_2446 0.51 +3.3
619,429 + B158DRAFT_2446 0.65 +3.3
619,434 + B158DRAFT_2446 0.65 +3.3
619,435 + B158DRAFT_2446 0.65 +3.2
619,442 - B158DRAFT_2446 0.66 +3.9
619,443 - B158DRAFT_2446 0.66 +3.7
619,449 + B158DRAFT_2446 0.67 +3.1
619,449 + B158DRAFT_2446 0.67 +3.4
619,449 + B158DRAFT_2446 0.67 +4.0
619,457 - B158DRAFT_2446 0.68 +3.3
619,459 - B158DRAFT_2446 0.68 +3.9
619,481 - B158DRAFT_2446 0.71 +3.2
619,481 - B158DRAFT_2446 0.71 +3.1
619,519 + B158DRAFT_2446 0.76 +3.1
619,556 + B158DRAFT_2446 0.80 +3.1
619,578 + B158DRAFT_2446 0.83 +3.1
619,586 - B158DRAFT_2446 0.84 +3.9
619,586 - B158DRAFT_2446 0.84 +3.2
619,586 - B158DRAFT_2446 0.84 +2.4
619,611 - B158DRAFT_2446 0.87 +4.7
619,618 - B158DRAFT_2446 0.88 +3.3
619,659 - +3.3
619,659 - +3.4
619,731 + +0.4
619,738 + -0.2
619,802 - -0.2
619,826 + +0.4
619,826 + +0.9
619,829 - -3.7
619,877 + B158DRAFT_2447 0.10 +1.7
619,877 + B158DRAFT_2447 0.10 -1.8
619,883 + B158DRAFT_2447 0.11 -0.5
619,885 - B158DRAFT_2447 0.11 +0.5
620,016 + B158DRAFT_2447 0.20 -0.4
620,047 + B158DRAFT_2447 0.23 -1.2
620,100 - B158DRAFT_2447 0.27 -1.6
620,130 + B158DRAFT_2447 0.29 +0.9
620,130 + B158DRAFT_2447 0.29 -0.2
620,140 + B158DRAFT_2447 0.30 -0.4
620,140 + B158DRAFT_2447 0.30 +0.2
620,140 + B158DRAFT_2447 0.30 -0.4
620,140 + B158DRAFT_2447 0.30 +0.7
620,140 + B158DRAFT_2447 0.30 -2.3
620,141 - B158DRAFT_2447 0.30 -0.0
620,148 - B158DRAFT_2447 0.30 -2.0
620,187 - B158DRAFT_2447 0.33 -0.1
620,214 + B158DRAFT_2447 0.35 +2.0
620,266 + B158DRAFT_2447 0.39 +0.5
620,281 + B158DRAFT_2447 0.40 -2.1
620,281 + B158DRAFT_2447 0.40 -0.4
620,281 + B158DRAFT_2447 0.40 +0.3
620,281 + B158DRAFT_2447 0.40 -0.9
620,289 - B158DRAFT_2447 0.40 +0.4
620,530 + B158DRAFT_2447 0.58 +0.9
620,530 + B158DRAFT_2447 0.58 -0.0
620,530 + B158DRAFT_2447 0.58 +0.2
620,530 + B158DRAFT_2447 0.58 -0.3
620,530 + B158DRAFT_2447 0.58 +1.7
620,538 - B158DRAFT_2447 0.59 -3.2
620,538 - B158DRAFT_2447 0.59 -0.6
620,538 - B158DRAFT_2447 0.59 -2.3
620,538 - B158DRAFT_2447 0.59 +0.2
620,538 - B158DRAFT_2447 0.59 +0.4
620,538 - B158DRAFT_2447 0.59 -2.3
620,538 - B158DRAFT_2447 0.59 -1.0
620,538 - B158DRAFT_2447 0.59 -0.2
620,538 - B158DRAFT_2447 0.59 -0.7
620,538 - B158DRAFT_2447 0.59 +1.4
620,538 - B158DRAFT_2447 0.59 -1.5
620,538 - B158DRAFT_2447 0.59 +1.8
620,554 + B158DRAFT_2447 0.60 +0.1
620,579 + B158DRAFT_2447 0.62 -0.6
620,579 + B158DRAFT_2447 0.62 -0.1
620,587 - B158DRAFT_2447 0.62 -0.6
620,587 - B158DRAFT_2447 0.62 -0.2
620,636 + B158DRAFT_2447 0.66 -2.3
620,667 + B158DRAFT_2447 0.68 +0.6
620,679 + B158DRAFT_2447 0.69 -0.3

Or see this region's nucleotide sequence