Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2439

Experiment: m.b. methylglyoxal 0.005 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2438 and B158DRAFT_2439 are separated by 148 nucleotidesB158DRAFT_2439 and B158DRAFT_2440 are separated by 23 nucleotides B158DRAFT_2438: B158DRAFT_2438 - hypothetical protein, at 609,856 to 611,433 _2438 B158DRAFT_2439: B158DRAFT_2439 - Peroxiredoxin, at 611,582 to 612,043 _2439 B158DRAFT_2440: B158DRAFT_2440 - Putative Zn-dependent protease, contains TPR repeats, at 612,067 to 613,566 _2440 Position (kb) 611 612 613Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2at 610.592 kb on + strand, within B158DRAFT_2438at 610.600 kb on - strand, within B158DRAFT_2438at 610.610 kb on - strand, within B158DRAFT_2438at 610.791 kb on + strand, within B158DRAFT_2438at 610.799 kb on - strand, within B158DRAFT_2438at 610.963 kb on + strand, within B158DRAFT_2438at 610.963 kb on + strand, within B158DRAFT_2438at 611.113 kb on + strand, within B158DRAFT_2438at 611.125 kb on + strand, within B158DRAFT_2438at 611.141 kb on + strand, within B158DRAFT_2438at 611.163 kb on + strand, within B158DRAFT_2438at 611.189 kb on + strand, within B158DRAFT_2438at 611.274 kb on + strand, within B158DRAFT_2438at 611.293 kb on + strandat 611.299 kb on - strandat 611.299 kb on - strandat 611.299 kb on - strandat 611.301 kb on - strandat 611.301 kb on - strandat 611.340 kb on + strandat 611.377 kb on - strandat 611.386 kb on + strandat 611.386 kb on + strandat 611.386 kb on + strandat 611.394 kb on - strandat 611.394 kb on - strandat 611.394 kb on - strandat 611.394 kb on - strandat 611.394 kb on - strandat 611.394 kb on - strandat 611.404 kb on - strandat 611.416 kb on - strandat 611.419 kb on - strandat 611.419 kb on - strandat 611.429 kb on + strandat 611.437 kb on - strandat 611.476 kb on - strandat 611.482 kb on + strandat 611.482 kb on + strandat 611.482 kb on + strandat 611.482 kb on + strandat 611.490 kb on - strandat 611.645 kb on - strand, within B158DRAFT_2439at 611.725 kb on - strand, within B158DRAFT_2439at 611.728 kb on - strand, within B158DRAFT_2439at 611.784 kb on + strand, within B158DRAFT_2439at 611.792 kb on - strand, within B158DRAFT_2439at 611.833 kb on - strand, within B158DRAFT_2439at 612.050 kb on - strandat 612.064 kb on + strandat 612.064 kb on + strandat 612.072 kb on - strandat 612.072 kb on - strandat 612.072 kb on - strandat 612.072 kb on - strandat 612.133 kb on + strandat 612.133 kb on + strandat 612.133 kb on + strandat 612.141 kb on - strandat 612.161 kb on + strandat 612.161 kb on + strandat 612.161 kb on + strandat 612.179 kb on - strandat 612.223 kb on - strand, within B158DRAFT_2440at 612.223 kb on - strand, within B158DRAFT_2440at 612.235 kb on + strand, within B158DRAFT_2440at 612.241 kb on + strand, within B158DRAFT_2440at 612.241 kb on + strand, within B158DRAFT_2440at 612.241 kb on + strand, within B158DRAFT_2440at 612.241 kb on + strand, within B158DRAFT_2440at 612.241 kb on + strand, within B158DRAFT_2440at 612.248 kb on - strand, within B158DRAFT_2440at 612.249 kb on - strand, within B158DRAFT_2440at 612.249 kb on - strand, within B158DRAFT_2440at 612.249 kb on - strand, within B158DRAFT_2440at 612.249 kb on - strand, within B158DRAFT_2440at 612.249 kb on - strand, within B158DRAFT_2440at 612.270 kb on - strand, within B158DRAFT_2440at 612.270 kb on - strand, within B158DRAFT_2440at 612.270 kb on - strand, within B158DRAFT_2440at 612.270 kb on - strand, within B158DRAFT_2440at 612.281 kb on + strand, within B158DRAFT_2440at 612.281 kb on + strand, within B158DRAFT_2440at 612.281 kb on + strand, within B158DRAFT_2440at 612.281 kb on + strand, within B158DRAFT_2440at 612.289 kb on - strand, within B158DRAFT_2440at 612.289 kb on - strand, within B158DRAFT_2440at 612.289 kb on - strand, within B158DRAFT_2440at 612.289 kb on - strand, within B158DRAFT_2440at 612.289 kb on - strand, within B158DRAFT_2440at 612.289 kb on - strand, within B158DRAFT_2440at 612.289 kb on - strand, within B158DRAFT_2440at 612.289 kb on - strand, within B158DRAFT_2440at 612.294 kb on - strand, within B158DRAFT_2440at 612.368 kb on + strand, within B158DRAFT_2440at 612.368 kb on + strand, within B158DRAFT_2440at 612.376 kb on - strand, within B158DRAFT_2440at 612.402 kb on - strand, within B158DRAFT_2440at 612.551 kb on - strand, within B158DRAFT_2440at 612.619 kb on - strand, within B158DRAFT_2440at 612.771 kb on - strand, within B158DRAFT_2440at 612.785 kb on + strand, within B158DRAFT_2440at 612.854 kb on + strand, within B158DRAFT_2440at 612.887 kb on + strand, within B158DRAFT_2440at 612.887 kb on + strand, within B158DRAFT_2440at 612.973 kb on + strand, within B158DRAFT_2440at 612.991 kb on - strand, within B158DRAFT_2440at 612.998 kb on - strand, within B158DRAFT_2440at 613.030 kb on - strand, within B158DRAFT_2440

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. methylglyoxal 0.005 vol%
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610,592 + B158DRAFT_2438 0.47 +0.2
610,600 - B158DRAFT_2438 0.47 +1.7
610,610 - B158DRAFT_2438 0.48 +1.0
610,791 + B158DRAFT_2438 0.59 +1.2
610,799 - B158DRAFT_2438 0.60 +0.0
610,963 + B158DRAFT_2438 0.70 +0.4
610,963 + B158DRAFT_2438 0.70 +0.3
611,113 + B158DRAFT_2438 0.80 +1.0
611,125 + B158DRAFT_2438 0.80 -0.2
611,141 + B158DRAFT_2438 0.81 +0.8
611,163 + B158DRAFT_2438 0.83 +1.3
611,189 + B158DRAFT_2438 0.84 -0.1
611,274 + B158DRAFT_2438 0.90 -0.3
611,293 + -0.2
611,299 - +0.6
611,299 - -1.3
611,299 - +1.3
611,301 - +0.1
611,301 - +0.3
611,340 + -0.4
611,377 - +0.5
611,386 + +0.1
611,386 + -0.4
611,386 + +1.1
611,394 - -0.2
611,394 - +0.5
611,394 - +0.3
611,394 - -0.2
611,394 - -0.0
611,394 - +0.5
611,404 - -0.1
611,416 - +0.4
611,419 - -0.3
611,419 - +0.4
611,429 + +0.5
611,437 - +1.9
611,476 - +0.5
611,482 + +0.5
611,482 + -0.4
611,482 + +0.4
611,482 + +0.8
611,490 - +0.1
611,645 - B158DRAFT_2439 0.14 -1.3
611,725 - B158DRAFT_2439 0.31 +0.0
611,728 - B158DRAFT_2439 0.32 -0.6
611,784 + B158DRAFT_2439 0.44 -2.1
611,792 - B158DRAFT_2439 0.45 -3.8
611,833 - B158DRAFT_2439 0.54 +0.3
612,050 - -0.8
612,064 + +0.5
612,064 + +1.3
612,072 - +0.1
612,072 - -0.2
612,072 - +0.7
612,072 - +0.6
612,133 + -0.3
612,133 + -0.6
612,133 + -1.3
612,141 - -1.3
612,161 + -1.9
612,161 + -2.5
612,161 + -2.3
612,179 - -1.8
612,223 - B158DRAFT_2440 0.10 -0.8
612,223 - B158DRAFT_2440 0.10 -0.3
612,235 + B158DRAFT_2440 0.11 -1.7
612,241 + B158DRAFT_2440 0.12 -1.0
612,241 + B158DRAFT_2440 0.12 -2.0
612,241 + B158DRAFT_2440 0.12 -1.0
612,241 + B158DRAFT_2440 0.12 -1.0
612,241 + B158DRAFT_2440 0.12 -1.5
612,248 - B158DRAFT_2440 0.12 -5.0
612,249 - B158DRAFT_2440 0.12 -1.6
612,249 - B158DRAFT_2440 0.12 -2.8
612,249 - B158DRAFT_2440 0.12 -1.9
612,249 - B158DRAFT_2440 0.12 -2.8
612,249 - B158DRAFT_2440 0.12 -4.2
612,270 - B158DRAFT_2440 0.14 -1.2
612,270 - B158DRAFT_2440 0.14 -2.4
612,270 - B158DRAFT_2440 0.14 -2.0
612,270 - B158DRAFT_2440 0.14 -4.2
612,281 + B158DRAFT_2440 0.14 -4.3
612,281 + B158DRAFT_2440 0.14 -1.4
612,281 + B158DRAFT_2440 0.14 -0.5
612,281 + B158DRAFT_2440 0.14 -2.0
612,289 - B158DRAFT_2440 0.15 -1.5
612,289 - B158DRAFT_2440 0.15 -3.4
612,289 - B158DRAFT_2440 0.15 -4.3
612,289 - B158DRAFT_2440 0.15 -2.0
612,289 - B158DRAFT_2440 0.15 -2.5
612,289 - B158DRAFT_2440 0.15 -1.0
612,289 - B158DRAFT_2440 0.15 -4.4
612,289 - B158DRAFT_2440 0.15 -0.8
612,294 - B158DRAFT_2440 0.15 -3.7
612,368 + B158DRAFT_2440 0.20 -1.1
612,368 + B158DRAFT_2440 0.20 -3.0
612,376 - B158DRAFT_2440 0.21 -2.9
612,402 - B158DRAFT_2440 0.22 -2.7
612,551 - B158DRAFT_2440 0.32 -2.1
612,619 - B158DRAFT_2440 0.37 -1.5
612,771 - B158DRAFT_2440 0.47 -3.0
612,785 + B158DRAFT_2440 0.48 -4.6
612,854 + B158DRAFT_2440 0.52 -1.6
612,887 + B158DRAFT_2440 0.55 -4.1
612,887 + B158DRAFT_2440 0.55 -2.1
612,973 + B158DRAFT_2440 0.60 -2.5
612,991 - B158DRAFT_2440 0.62 -1.9
612,998 - B158DRAFT_2440 0.62 -0.9
613,030 - B158DRAFT_2440 0.64 -0.8

Or see this region's nucleotide sequence