Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2404

Experiment: m.b. methylglyoxal 0.005 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2402 and B158DRAFT_2403 are separated by 179 nucleotidesB158DRAFT_2403 and B158DRAFT_2404 are separated by 203 nucleotidesB158DRAFT_2404 and B158DRAFT_2405 overlap by 4 nucleotidesB158DRAFT_2405 and B158DRAFT_2406 are separated by 50 nucleotides B158DRAFT_2402: B158DRAFT_2402 - Transcriptional regulators, at 573,843 to 574,283 _2402 B158DRAFT_2403: B158DRAFT_2403 - ribosomal protein S20, at 574,463 to 574,723 _2403 B158DRAFT_2404: B158DRAFT_2404 - integral membrane protein MviN, at 574,927 to 576,462 _2404 B158DRAFT_2405: B158DRAFT_2405 - hypothetical protein, at 576,459 to 577,190 _2405 B158DRAFT_2406: B158DRAFT_2406 - hypothetical protein, at 577,241 to 577,819 _2406 Position (kb) 574 575 576 577Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 573.975 kb on + strand, within B158DRAFT_2402at 573.993 kb on - strand, within B158DRAFT_2402at 574.018 kb on - strand, within B158DRAFT_2402at 574.028 kb on + strand, within B158DRAFT_2402at 574.029 kb on - strand, within B158DRAFT_2402at 574.036 kb on - strand, within B158DRAFT_2402at 574.049 kb on - strand, within B158DRAFT_2402at 574.118 kb on + strand, within B158DRAFT_2402at 574.118 kb on + strand, within B158DRAFT_2402at 574.118 kb on + strand, within B158DRAFT_2402at 574.118 kb on + strand, within B158DRAFT_2402at 574.118 kb on + strand, within B158DRAFT_2402at 574.123 kb on + strand, within B158DRAFT_2402at 574.123 kb on + strand, within B158DRAFT_2402at 574.123 kb on + strand, within B158DRAFT_2402at 574.123 kb on + strand, within B158DRAFT_2402at 574.126 kb on - strand, within B158DRAFT_2402at 574.126 kb on - strand, within B158DRAFT_2402at 574.126 kb on - strand, within B158DRAFT_2402at 574.131 kb on - strand, within B158DRAFT_2402at 574.131 kb on - strand, within B158DRAFT_2402at 574.131 kb on - strand, within B158DRAFT_2402at 574.131 kb on - strand, within B158DRAFT_2402at 574.131 kb on - strand, within B158DRAFT_2402at 574.131 kb on - strand, within B158DRAFT_2402at 574.131 kb on - strand, within B158DRAFT_2402at 574.131 kb on - strand, within B158DRAFT_2402at 574.144 kb on - strand, within B158DRAFT_2402at 574.207 kb on + strand, within B158DRAFT_2402at 574.215 kb on + strand, within B158DRAFT_2402at 574.215 kb on - strand, within B158DRAFT_2402at 574.249 kb on - strandat 574.338 kb on + strandat 574.338 kb on + strandat 574.338 kb on + strandat 574.346 kb on - strandat 574.346 kb on - strandat 574.429 kb on + strandat 574.478 kb on - strandat 574.478 kb on - strandat 576.454 kb on + strandat 576.462 kb on - strandat 576.462 kb on - strandat 576.468 kb on + strandat 576.588 kb on + strand, within B158DRAFT_2405at 576.589 kb on + strand, within B158DRAFT_2405at 576.719 kb on + strand, within B158DRAFT_2405at 576.763 kb on + strand, within B158DRAFT_2405at 576.840 kb on - strand, within B158DRAFT_2405at 576.844 kb on - strand, within B158DRAFT_2405at 576.959 kb on + strand, within B158DRAFT_2405at 577.017 kb on + strand, within B158DRAFT_2405at 577.017 kb on + strand, within B158DRAFT_2405at 577.025 kb on - strand, within B158DRAFT_2405at 577.025 kb on - strand, within B158DRAFT_2405at 577.065 kb on + strand, within B158DRAFT_2405at 577.065 kb on + strand, within B158DRAFT_2405at 577.073 kb on - strand, within B158DRAFT_2405at 577.073 kb on - strand, within B158DRAFT_2405at 577.110 kb on - strand, within B158DRAFT_2405at 577.112 kb on + strand, within B158DRAFT_2405at 577.120 kb on + strandat 577.120 kb on + strandat 577.128 kb on - strandat 577.158 kb on + strandat 577.168 kb on + strandat 577.187 kb on - strandat 577.256 kb on - strandat 577.256 kb on - strandat 577.259 kb on + strandat 577.269 kb on + strandat 577.269 kb on + strandat 577.269 kb on + strandat 577.269 kb on + strandat 577.277 kb on - strandat 577.277 kb on - strandat 577.326 kb on + strand, within B158DRAFT_2406at 577.382 kb on + strand, within B158DRAFT_2406at 577.421 kb on + strand, within B158DRAFT_2406at 577.428 kb on + strand, within B158DRAFT_2406at 577.436 kb on - strand, within B158DRAFT_2406at 577.438 kb on + strand, within B158DRAFT_2406at 577.438 kb on + strand, within B158DRAFT_2406at 577.446 kb on - strand, within B158DRAFT_2406

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. methylglyoxal 0.005 vol%
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573,975 + B158DRAFT_2402 0.30 -0.4
573,993 - B158DRAFT_2402 0.34 -0.6
574,018 - B158DRAFT_2402 0.40 +0.1
574,028 + B158DRAFT_2402 0.42 -0.1
574,029 - B158DRAFT_2402 0.42 +0.3
574,036 - B158DRAFT_2402 0.44 +0.8
574,049 - B158DRAFT_2402 0.47 -0.5
574,118 + B158DRAFT_2402 0.62 +0.1
574,118 + B158DRAFT_2402 0.62 -1.0
574,118 + B158DRAFT_2402 0.62 -0.1
574,118 + B158DRAFT_2402 0.62 +0.8
574,118 + B158DRAFT_2402 0.62 -0.1
574,123 + B158DRAFT_2402 0.63 +0.6
574,123 + B158DRAFT_2402 0.63 +0.5
574,123 + B158DRAFT_2402 0.63 +0.5
574,123 + B158DRAFT_2402 0.63 -0.2
574,126 - B158DRAFT_2402 0.64 -0.4
574,126 - B158DRAFT_2402 0.64 +0.5
574,126 - B158DRAFT_2402 0.64 -0.5
574,131 - B158DRAFT_2402 0.65 -1.2
574,131 - B158DRAFT_2402 0.65 +0.5
574,131 - B158DRAFT_2402 0.65 -0.1
574,131 - B158DRAFT_2402 0.65 +0.2
574,131 - B158DRAFT_2402 0.65 +0.2
574,131 - B158DRAFT_2402 0.65 -0.5
574,131 - B158DRAFT_2402 0.65 +0.0
574,131 - B158DRAFT_2402 0.65 -1.2
574,144 - B158DRAFT_2402 0.68 -1.9
574,207 + B158DRAFT_2402 0.83 +0.9
574,215 + B158DRAFT_2402 0.84 +0.0
574,215 - B158DRAFT_2402 0.84 +0.4
574,249 - -2.1
574,338 + -0.4
574,338 + +0.7
574,338 + +0.7
574,346 - +0.8
574,346 - -0.3
574,429 + +0.3
574,478 - +0.7
574,478 - +1.1
576,454 + +0.0
576,462 - +1.5
576,462 - +0.6
576,468 + +1.2
576,588 + B158DRAFT_2405 0.18 -2.8
576,589 + B158DRAFT_2405 0.18 +0.8
576,719 + B158DRAFT_2405 0.36 +0.8
576,763 + B158DRAFT_2405 0.42 -2.2
576,840 - B158DRAFT_2405 0.52 +0.3
576,844 - B158DRAFT_2405 0.53 +1.8
576,959 + B158DRAFT_2405 0.68 +0.2
577,017 + B158DRAFT_2405 0.76 -0.3
577,017 + B158DRAFT_2405 0.76 -0.6
577,025 - B158DRAFT_2405 0.77 +0.3
577,025 - B158DRAFT_2405 0.77 +0.7
577,065 + B158DRAFT_2405 0.83 +0.4
577,065 + B158DRAFT_2405 0.83 +0.5
577,073 - B158DRAFT_2405 0.84 +0.3
577,073 - B158DRAFT_2405 0.84 -0.7
577,110 - B158DRAFT_2405 0.89 +0.1
577,112 + B158DRAFT_2405 0.89 +0.7
577,120 + -1.1
577,120 + -3.2
577,128 - -0.4
577,158 + -1.6
577,168 + -0.1
577,187 - +0.3
577,256 - +2.7
577,256 - +1.2
577,259 + +0.7
577,269 + -0.6
577,269 + +1.0
577,269 + +0.3
577,269 + -0.1
577,277 - -2.8
577,277 - -0.6
577,326 + B158DRAFT_2406 0.15 +0.7
577,382 + B158DRAFT_2406 0.24 +0.3
577,421 + B158DRAFT_2406 0.31 +0.3
577,428 + B158DRAFT_2406 0.32 +0.6
577,436 - B158DRAFT_2406 0.34 -0.6
577,438 + B158DRAFT_2406 0.34 -0.4
577,438 + B158DRAFT_2406 0.34 +1.4
577,446 - B158DRAFT_2406 0.35 -0.6

Or see this region's nucleotide sequence