Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2345

Experiment: m.b. methylglyoxal 0.005 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2344 and B158DRAFT_2345 are separated by 100 nucleotidesB158DRAFT_2345 and B158DRAFT_2346 are separated by 42 nucleotidesB158DRAFT_2346 and B158DRAFT_2347 overlap by 8 nucleotides B158DRAFT_2344: B158DRAFT_2344 - 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7), at 509,482 to 510,339 _2344 B158DRAFT_2345: B158DRAFT_2345 - hypothetical protein, at 510,440 to 511,897 _2345 B158DRAFT_2346: B158DRAFT_2346 - hypothetical protein, at 511,940 to 512,347 _2346 B158DRAFT_2347: B158DRAFT_2347 - Periplasmic protein involved in polysaccharide export, at 512,340 to 514,139 _2347 Position (kb) 510 511 512Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1at 509.514 kb on + strandat 509.522 kb on - strandat 509.784 kb on - strand, within B158DRAFT_2344at 509.895 kb on - strand, within B158DRAFT_2344at 510.023 kb on - strand, within B158DRAFT_2344at 510.110 kb on - strand, within B158DRAFT_2344at 510.210 kb on - strand, within B158DRAFT_2344at 510.319 kb on - strandat 510.320 kb on + strandat 510.353 kb on - strandat 510.445 kb on + strandat 510.494 kb on - strandat 510.526 kb on - strandat 510.536 kb on + strandat 510.585 kb on + strandat 510.587 kb on + strand, within B158DRAFT_2345at 510.587 kb on + strand, within B158DRAFT_2345at 510.592 kb on + strand, within B158DRAFT_2345at 510.687 kb on - strand, within B158DRAFT_2345at 510.807 kb on + strand, within B158DRAFT_2345at 510.807 kb on + strand, within B158DRAFT_2345at 510.807 kb on + strand, within B158DRAFT_2345at 510.807 kb on + strand, within B158DRAFT_2345at 510.807 kb on + strand, within B158DRAFT_2345at 510.807 kb on + strand, within B158DRAFT_2345at 510.807 kb on + strand, within B158DRAFT_2345at 510.807 kb on + strand, within B158DRAFT_2345at 510.815 kb on - strand, within B158DRAFT_2345at 510.815 kb on - strand, within B158DRAFT_2345at 510.815 kb on - strand, within B158DRAFT_2345at 510.815 kb on - strand, within B158DRAFT_2345at 510.815 kb on - strand, within B158DRAFT_2345at 510.815 kb on - strand, within B158DRAFT_2345at 510.815 kb on - strand, within B158DRAFT_2345at 510.815 kb on - strand, within B158DRAFT_2345at 510.815 kb on - strand, within B158DRAFT_2345at 510.825 kb on - strand, within B158DRAFT_2345at 510.837 kb on - strand, within B158DRAFT_2345at 510.854 kb on + strand, within B158DRAFT_2345at 510.862 kb on - strand, within B158DRAFT_2345at 510.862 kb on - strand, within B158DRAFT_2345at 510.880 kb on + strand, within B158DRAFT_2345at 510.885 kb on + strand, within B158DRAFT_2345at 510.893 kb on - strand, within B158DRAFT_2345at 510.893 kb on - strand, within B158DRAFT_2345at 510.893 kb on - strand, within B158DRAFT_2345at 510.902 kb on - strand, within B158DRAFT_2345at 510.947 kb on - strand, within B158DRAFT_2345at 510.962 kb on - strand, within B158DRAFT_2345at 510.963 kb on - strand, within B158DRAFT_2345at 511.061 kb on - strand, within B158DRAFT_2345at 511.068 kb on + strand, within B158DRAFT_2345at 511.073 kb on + strand, within B158DRAFT_2345at 511.076 kb on - strand, within B158DRAFT_2345at 511.150 kb on + strand, within B158DRAFT_2345at 511.151 kb on + strand, within B158DRAFT_2345at 511.158 kb on + strand, within B158DRAFT_2345at 511.158 kb on + strand, within B158DRAFT_2345at 511.159 kb on + strand, within B158DRAFT_2345at 511.166 kb on + strand, within B158DRAFT_2345at 511.166 kb on - strand, within B158DRAFT_2345at 511.166 kb on - strand, within B158DRAFT_2345at 511.174 kb on - strand, within B158DRAFT_2345at 511.174 kb on - strand, within B158DRAFT_2345at 511.200 kb on - strand, within B158DRAFT_2345at 511.202 kb on + strand, within B158DRAFT_2345at 511.202 kb on + strand, within B158DRAFT_2345at 511.210 kb on - strand, within B158DRAFT_2345at 511.210 kb on - strand, within B158DRAFT_2345at 511.210 kb on - strand, within B158DRAFT_2345at 511.258 kb on - strand, within B158DRAFT_2345at 511.311 kb on + strand, within B158DRAFT_2345at 511.422 kb on + strand, within B158DRAFT_2345at 511.533 kb on + strand, within B158DRAFT_2345at 511.533 kb on + strand, within B158DRAFT_2345at 511.533 kb on + strand, within B158DRAFT_2345at 511.533 kb on + strand, within B158DRAFT_2345at 511.533 kb on + strand, within B158DRAFT_2345at 511.541 kb on - strand, within B158DRAFT_2345at 511.541 kb on - strand, within B158DRAFT_2345at 511.541 kb on - strand, within B158DRAFT_2345at 511.593 kb on + strand, within B158DRAFT_2345at 512.014 kb on - strand, within B158DRAFT_2346at 512.315 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. methylglyoxal 0.005 vol%
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509,514 + +1.4
509,522 - -0.6
509,784 - B158DRAFT_2344 0.35 -3.0
509,895 - B158DRAFT_2344 0.48 -2.0
510,023 - B158DRAFT_2344 0.63 -1.9
510,110 - B158DRAFT_2344 0.73 -2.7
510,210 - B158DRAFT_2344 0.85 -1.0
510,319 - -0.1
510,320 + -0.1
510,353 - -1.7
510,445 + -1.0
510,494 - -2.2
510,526 - -1.4
510,536 + -4.1
510,585 + -1.2
510,587 + B158DRAFT_2345 0.10 -2.5
510,587 + B158DRAFT_2345 0.10 -4.4
510,592 + B158DRAFT_2345 0.10 -2.8
510,687 - B158DRAFT_2345 0.17 -1.1
510,807 + B158DRAFT_2345 0.25 -3.1
510,807 + B158DRAFT_2345 0.25 -3.5
510,807 + B158DRAFT_2345 0.25 -2.5
510,807 + B158DRAFT_2345 0.25 -3.0
510,807 + B158DRAFT_2345 0.25 -1.5
510,807 + B158DRAFT_2345 0.25 -3.4
510,807 + B158DRAFT_2345 0.25 -3.8
510,807 + B158DRAFT_2345 0.25 -2.4
510,815 - B158DRAFT_2345 0.26 -1.7
510,815 - B158DRAFT_2345 0.26 -0.5
510,815 - B158DRAFT_2345 0.26 -2.1
510,815 - B158DRAFT_2345 0.26 -2.3
510,815 - B158DRAFT_2345 0.26 -3.1
510,815 - B158DRAFT_2345 0.26 -0.9
510,815 - B158DRAFT_2345 0.26 -2.0
510,815 - B158DRAFT_2345 0.26 -1.6
510,815 - B158DRAFT_2345 0.26 -3.0
510,825 - B158DRAFT_2345 0.26 -3.1
510,837 - B158DRAFT_2345 0.27 -2.2
510,854 + B158DRAFT_2345 0.28 -3.0
510,862 - B158DRAFT_2345 0.29 -2.9
510,862 - B158DRAFT_2345 0.29 -2.2
510,880 + B158DRAFT_2345 0.30 -3.8
510,885 + B158DRAFT_2345 0.31 -4.4
510,893 - B158DRAFT_2345 0.31 -2.9
510,893 - B158DRAFT_2345 0.31 -0.9
510,893 - B158DRAFT_2345 0.31 -1.2
510,902 - B158DRAFT_2345 0.32 -4.1
510,947 - B158DRAFT_2345 0.35 -1.4
510,962 - B158DRAFT_2345 0.36 -0.2
510,963 - B158DRAFT_2345 0.36 -1.8
511,061 - B158DRAFT_2345 0.43 -1.8
511,068 + B158DRAFT_2345 0.43 -2.4
511,073 + B158DRAFT_2345 0.43 -2.2
511,076 - B158DRAFT_2345 0.44 -2.4
511,150 + B158DRAFT_2345 0.49 -3.7
511,151 + B158DRAFT_2345 0.49 -3.2
511,158 + B158DRAFT_2345 0.49 -1.2
511,158 + B158DRAFT_2345 0.49 -5.8
511,159 + B158DRAFT_2345 0.49 -4.4
511,166 + B158DRAFT_2345 0.50 -3.5
511,166 - B158DRAFT_2345 0.50 -3.0
511,166 - B158DRAFT_2345 0.50 -1.8
511,174 - B158DRAFT_2345 0.50 -0.7
511,174 - B158DRAFT_2345 0.50 -1.3
511,200 - B158DRAFT_2345 0.52 -1.4
511,202 + B158DRAFT_2345 0.52 -4.8
511,202 + B158DRAFT_2345 0.52 -3.3
511,210 - B158DRAFT_2345 0.53 -2.2
511,210 - B158DRAFT_2345 0.53 -4.0
511,210 - B158DRAFT_2345 0.53 +0.1
511,258 - B158DRAFT_2345 0.56 -1.9
511,311 + B158DRAFT_2345 0.60 -3.5
511,422 + B158DRAFT_2345 0.67 -2.2
511,533 + B158DRAFT_2345 0.75 -3.9
511,533 + B158DRAFT_2345 0.75 -3.4
511,533 + B158DRAFT_2345 0.75 -3.4
511,533 + B158DRAFT_2345 0.75 -2.2
511,533 + B158DRAFT_2345 0.75 -4.8
511,541 - B158DRAFT_2345 0.76 -1.1
511,541 - B158DRAFT_2345 0.76 -2.6
511,541 - B158DRAFT_2345 0.76 +0.8
511,593 + B158DRAFT_2345 0.79 -0.7
512,014 - B158DRAFT_2346 0.18 -3.8
512,315 + -1.5

Or see this region's nucleotide sequence