Experiment: m.b. methylglyoxal 0.005 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2208 and B158DRAFT_2209 are separated by 119 nucleotides B158DRAFT_2209 and B158DRAFT_2210 are separated by 205 nucleotides
B158DRAFT_2208: B158DRAFT_2208 - transcriptional regulator, GntR family, at 354,505 to 355,227
_2208
B158DRAFT_2209: B158DRAFT_2209 - Bacterial virulence factor lipase N-terminal., at 355,347 to 357,488
_2209
B158DRAFT_2210: B158DRAFT_2210 - Periplasmic serine proteases (ClpP class), at 357,694 to 358,851
_2210
Position (kb) 355
356
357
358 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 354.504 kb on - strand at 354.515 kb on - strand at 354.531 kb on - strand at 354.746 kb on + strand, within B158DRAFT_2208 at 354.754 kb on - strand, within B158DRAFT_2208 at 354.764 kb on - strand, within B158DRAFT_2208 at 354.799 kb on - strand, within B158DRAFT_2208 at 354.819 kb on + strand, within B158DRAFT_2208 at 354.943 kb on + strand, within B158DRAFT_2208 at 354.996 kb on - strand, within B158DRAFT_2208 at 355.065 kb on - strand, within B158DRAFT_2208 at 355.118 kb on - strand, within B158DRAFT_2208 at 355.119 kb on - strand, within B158DRAFT_2208 at 355.124 kb on - strand, within B158DRAFT_2208 at 355.124 kb on - strand, within B158DRAFT_2208 at 355.129 kb on - strand, within B158DRAFT_2208 at 355.129 kb on - strand, within B158DRAFT_2208 at 355.185 kb on + strand at 355.185 kb on + strand at 355.185 kb on + strand at 355.193 kb on - strand at 355.205 kb on + strand at 355.234 kb on + strand at 355.248 kb on + strand at 355.256 kb on - strand at 355.271 kb on + strand at 355.322 kb on - strand at 355.356 kb on + strand at 355.376 kb on + strand at 355.382 kb on - strand at 355.382 kb on - strand at 355.397 kb on + strand at 355.419 kb on - strand at 355.440 kb on + strand at 355.446 kb on + strand at 355.555 kb on + strand at 355.620 kb on - strand, within B158DRAFT_2209 at 355.633 kb on + strand, within B158DRAFT_2209 at 355.641 kb on - strand, within B158DRAFT_2209 at 355.641 kb on - strand, within B158DRAFT_2209 at 355.660 kb on + strand, within B158DRAFT_2209 at 355.660 kb on + strand, within B158DRAFT_2209 at 355.660 kb on + strand, within B158DRAFT_2209 at 355.660 kb on + strand, within B158DRAFT_2209 at 355.660 kb on + strand, within B158DRAFT_2209 at 355.660 kb on + strand, within B158DRAFT_2209 at 355.660 kb on + strand, within B158DRAFT_2209 at 355.668 kb on - strand, within B158DRAFT_2209 at 355.668 kb on - strand, within B158DRAFT_2209 at 355.668 kb on - strand, within B158DRAFT_2209 at 355.677 kb on + strand, within B158DRAFT_2209 at 355.694 kb on + strand, within B158DRAFT_2209 at 355.705 kb on + strand, within B158DRAFT_2209 at 355.713 kb on - strand, within B158DRAFT_2209 at 355.722 kb on - strand, within B158DRAFT_2209 at 355.749 kb on - strand, within B158DRAFT_2209 at 355.784 kb on + strand, within B158DRAFT_2209 at 355.818 kb on + strand, within B158DRAFT_2209 at 355.818 kb on + strand, within B158DRAFT_2209 at 355.826 kb on - strand, within B158DRAFT_2209 at 355.910 kb on + strand, within B158DRAFT_2209 at 355.989 kb on + strand, within B158DRAFT_2209 at 355.989 kb on + strand, within B158DRAFT_2209 at 355.991 kb on + strand, within B158DRAFT_2209 at 355.997 kb on - strand, within B158DRAFT_2209 at 355.998 kb on - strand, within B158DRAFT_2209 at 356.007 kb on - strand, within B158DRAFT_2209 at 356.026 kb on - strand, within B158DRAFT_2209 at 356.031 kb on + strand, within B158DRAFT_2209 at 356.067 kb on + strand, within B158DRAFT_2209 at 356.075 kb on - strand, within B158DRAFT_2209 at 356.075 kb on - strand, within B158DRAFT_2209 at 356.096 kb on - strand, within B158DRAFT_2209 at 356.148 kb on + strand, within B158DRAFT_2209 at 356.148 kb on + strand, within B158DRAFT_2209 at 356.167 kb on + strand, within B158DRAFT_2209 at 356.231 kb on + strand, within B158DRAFT_2209 at 356.285 kb on + strand, within B158DRAFT_2209 at 356.293 kb on - strand, within B158DRAFT_2209 at 356.295 kb on + strand, within B158DRAFT_2209 at 356.303 kb on - strand, within B158DRAFT_2209 at 356.303 kb on - strand, within B158DRAFT_2209 at 356.303 kb on - strand, within B158DRAFT_2209 at 356.312 kb on + strand, within B158DRAFT_2209 at 356.312 kb on + strand, within B158DRAFT_2209 at 356.312 kb on + strand, within B158DRAFT_2209 at 356.313 kb on - strand, within B158DRAFT_2209 at 356.320 kb on - strand, within B158DRAFT_2209 at 356.320 kb on - strand, within B158DRAFT_2209 at 356.320 kb on - strand, within B158DRAFT_2209 at 356.363 kb on + strand, within B158DRAFT_2209 at 356.371 kb on - strand, within B158DRAFT_2209 at 356.443 kb on - strand, within B158DRAFT_2209 at 356.448 kb on + strand, within B158DRAFT_2209 at 356.456 kb on - strand, within B158DRAFT_2209 at 356.456 kb on - strand, within B158DRAFT_2209 at 356.456 kb on - strand, within B158DRAFT_2209 at 356.456 kb on - strand, within B158DRAFT_2209 at 356.458 kb on + strand, within B158DRAFT_2209 at 356.458 kb on + strand, within B158DRAFT_2209 at 356.465 kb on + strand, within B158DRAFT_2209 at 356.465 kb on + strand, within B158DRAFT_2209 at 356.465 kb on + strand, within B158DRAFT_2209 at 356.466 kb on - strand, within B158DRAFT_2209 at 356.473 kb on - strand, within B158DRAFT_2209 at 356.542 kb on - strand, within B158DRAFT_2209 at 356.551 kb on + strand, within B158DRAFT_2209 at 356.570 kb on + strand, within B158DRAFT_2209 at 356.578 kb on - strand, within B158DRAFT_2209 at 356.578 kb on - strand, within B158DRAFT_2209 at 356.578 kb on - strand, within B158DRAFT_2209 at 356.585 kb on - strand, within B158DRAFT_2209 at 356.587 kb on + strand, within B158DRAFT_2209 at 356.595 kb on + strand, within B158DRAFT_2209 at 356.595 kb on + strand, within B158DRAFT_2209 at 356.595 kb on + strand, within B158DRAFT_2209 at 356.595 kb on - strand, within B158DRAFT_2209 at 356.597 kb on + strand, within B158DRAFT_2209 at 356.603 kb on - strand, within B158DRAFT_2209 at 356.605 kb on - strand, within B158DRAFT_2209 at 356.605 kb on - strand, within B158DRAFT_2209 at 356.630 kb on - strand, within B158DRAFT_2209 at 356.635 kb on - strand, within B158DRAFT_2209 at 356.648 kb on - strand, within B158DRAFT_2209 at 356.719 kb on + strand, within B158DRAFT_2209 at 356.817 kb on + strand, within B158DRAFT_2209 at 356.817 kb on + strand, within B158DRAFT_2209 at 356.817 kb on + strand, within B158DRAFT_2209 at 356.817 kb on + strand, within B158DRAFT_2209 at 356.817 kb on + strand, within B158DRAFT_2209 at 356.817 kb on + strand, within B158DRAFT_2209 at 356.817 kb on + strand, within B158DRAFT_2209 at 356.817 kb on + strand, within B158DRAFT_2209 at 356.817 kb on + strand, within B158DRAFT_2209 at 356.817 kb on + strand, within B158DRAFT_2209 at 356.817 kb on + strand, within B158DRAFT_2209 at 356.817 kb on + strand, within B158DRAFT_2209 at 356.825 kb on - strand, within B158DRAFT_2209 at 356.825 kb on - strand, within B158DRAFT_2209 at 356.825 kb on - strand, within B158DRAFT_2209 at 356.825 kb on - strand, within B158DRAFT_2209 at 356.825 kb on - strand, within B158DRAFT_2209 at 356.845 kb on - strand, within B158DRAFT_2209 at 356.869 kb on + strand, within B158DRAFT_2209 at 356.869 kb on + strand, within B158DRAFT_2209 at 356.923 kb on - strand, within B158DRAFT_2209 at 356.984 kb on + strand, within B158DRAFT_2209 at 356.984 kb on + strand, within B158DRAFT_2209 at 356.984 kb on + strand, within B158DRAFT_2209 at 356.984 kb on + strand, within B158DRAFT_2209 at 356.984 kb on + strand, within B158DRAFT_2209 at 356.984 kb on + strand, within B158DRAFT_2209 at 356.984 kb on + strand, within B158DRAFT_2209 at 356.987 kb on - strand, within B158DRAFT_2209 at 356.992 kb on - strand, within B158DRAFT_2209 at 356.992 kb on - strand, within B158DRAFT_2209 at 357.140 kb on - strand, within B158DRAFT_2209 at 357.141 kb on + strand, within B158DRAFT_2209 at 357.149 kb on - strand, within B158DRAFT_2209 at 357.179 kb on + strand, within B158DRAFT_2209 at 357.179 kb on + strand, within B158DRAFT_2209 at 357.245 kb on + strand, within B158DRAFT_2209 at 357.280 kb on - strand at 357.288 kb on + strand at 357.369 kb on + strand at 357.371 kb on + strand at 357.377 kb on - strand at 357.379 kb on - strand at 357.443 kb on - strand at 357.460 kb on - strand at 357.490 kb on + strand at 357.490 kb on + strand at 357.498 kb on - strand at 357.584 kb on + strand at 357.584 kb on + strand at 357.591 kb on + strand at 357.591 kb on + strand at 357.648 kb on + strand at 357.648 kb on + strand at 357.648 kb on + strand at 357.648 kb on + strand at 357.648 kb on + strand at 357.648 kb on + strand at 357.648 kb on + strand at 357.656 kb on - strand at 357.656 kb on - strand at 357.656 kb on - strand at 357.656 kb on - strand at 357.656 kb on - strand at 357.656 kb on - strand at 357.656 kb on - strand at 357.656 kb on - strand at 357.777 kb on + strand at 357.777 kb on + strand at 357.793 kb on + strand at 357.826 kb on + strand, within B158DRAFT_2210 at 357.827 kb on - strand, within B158DRAFT_2210 at 357.827 kb on - strand, within B158DRAFT_2210 at 357.834 kb on - strand, within B158DRAFT_2210 at 357.862 kb on - strand, within B158DRAFT_2210 at 357.895 kb on + strand, within B158DRAFT_2210 at 358.011 kb on + strand, within B158DRAFT_2210 at 358.143 kb on + strand, within B158DRAFT_2210 at 358.149 kb on - strand, within B158DRAFT_2210 at 358.149 kb on - strand, within B158DRAFT_2210 at 358.204 kb on - strand, within B158DRAFT_2210 at 358.211 kb on - strand, within B158DRAFT_2210 at 358.231 kb on - strand, within B158DRAFT_2210 at 358.237 kb on + strand, within B158DRAFT_2210 at 358.239 kb on - strand, within B158DRAFT_2210 at 358.244 kb on + strand, within B158DRAFT_2210 at 358.244 kb on + strand, within B158DRAFT_2210 at 358.245 kb on - strand, within B158DRAFT_2210 at 358.252 kb on - strand, within B158DRAFT_2210 at 358.274 kb on - strand, within B158DRAFT_2210 at 358.333 kb on + strand, within B158DRAFT_2210 at 358.333 kb on + strand, within B158DRAFT_2210 at 358.333 kb on + strand, within B158DRAFT_2210 at 358.333 kb on + strand, within B158DRAFT_2210 at 358.354 kb on + strand, within B158DRAFT_2210 at 358.472 kb on - strand, within B158DRAFT_2210
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. methylglyoxal 0.005 vol% remove 354,504 - +1.9 354,515 - +1.3 354,531 - +0.2 354,746 + B158DRAFT_2208 0.33 +1.7 354,754 - B158DRAFT_2208 0.34 +1.7 354,764 - B158DRAFT_2208 0.36 +1.7 354,799 - B158DRAFT_2208 0.41 +0.9 354,819 + B158DRAFT_2208 0.43 +2.1 354,943 + B158DRAFT_2208 0.61 +2.1 354,996 - B158DRAFT_2208 0.68 +1.7 355,065 - B158DRAFT_2208 0.77 +1.4 355,118 - B158DRAFT_2208 0.85 +1.6 355,119 - B158DRAFT_2208 0.85 +1.4 355,124 - B158DRAFT_2208 0.86 +1.2 355,124 - B158DRAFT_2208 0.86 +2.1 355,129 - B158DRAFT_2208 0.86 +2.0 355,129 - B158DRAFT_2208 0.86 +1.3 355,185 + +1.8 355,185 + +1.8 355,185 + +0.6 355,193 - +1.6 355,205 + +0.9 355,234 + +0.3 355,248 + -0.3 355,256 - +0.7 355,271 + -0.1 355,322 - +0.9 355,356 + -3.1 355,376 + -1.0 355,382 - -0.5 355,382 - +1.7 355,397 + +0.2 355,419 - -0.6 355,440 + +0.8 355,446 + +0.3 355,555 + +0.9 355,620 - B158DRAFT_2209 0.13 -0.5 355,633 + B158DRAFT_2209 0.13 -1.2 355,641 - B158DRAFT_2209 0.14 +0.2 355,641 - B158DRAFT_2209 0.14 +1.1 355,660 + B158DRAFT_2209 0.15 -0.1 355,660 + B158DRAFT_2209 0.15 +0.8 355,660 + B158DRAFT_2209 0.15 +1.9 355,660 + B158DRAFT_2209 0.15 +1.7 355,660 + B158DRAFT_2209 0.15 +0.1 355,660 + B158DRAFT_2209 0.15 -0.4 355,660 + B158DRAFT_2209 0.15 +0.0 355,668 - B158DRAFT_2209 0.15 +0.4 355,668 - B158DRAFT_2209 0.15 +0.6 355,668 - B158DRAFT_2209 0.15 +0.6 355,677 + B158DRAFT_2209 0.15 +0.8 355,694 + B158DRAFT_2209 0.16 +0.6 355,705 + B158DRAFT_2209 0.17 +0.4 355,713 - B158DRAFT_2209 0.17 -0.6 355,722 - B158DRAFT_2209 0.18 +0.3 355,749 - B158DRAFT_2209 0.19 +0.9 355,784 + B158DRAFT_2209 0.20 +1.2 355,818 + B158DRAFT_2209 0.22 -3.4 355,818 + B158DRAFT_2209 0.22 -0.1 355,826 - B158DRAFT_2209 0.22 -2.5 355,910 + B158DRAFT_2209 0.26 +0.1 355,989 + B158DRAFT_2209 0.30 +0.3 355,989 + B158DRAFT_2209 0.30 +0.3 355,991 + B158DRAFT_2209 0.30 +1.1 355,997 - B158DRAFT_2209 0.30 +0.4 355,998 - B158DRAFT_2209 0.30 -0.3 356,007 - B158DRAFT_2209 0.31 +0.3 356,026 - B158DRAFT_2209 0.32 +0.6 356,031 + B158DRAFT_2209 0.32 -2.2 356,067 + B158DRAFT_2209 0.34 -0.1 356,075 - B158DRAFT_2209 0.34 -2.3 356,075 - B158DRAFT_2209 0.34 -0.4 356,096 - B158DRAFT_2209 0.35 +0.8 356,148 + B158DRAFT_2209 0.37 -3.8 356,148 + B158DRAFT_2209 0.37 -0.0 356,167 + B158DRAFT_2209 0.38 +1.0 356,231 + B158DRAFT_2209 0.41 +0.2 356,285 + B158DRAFT_2209 0.44 -0.2 356,293 - B158DRAFT_2209 0.44 +0.7 356,295 + B158DRAFT_2209 0.44 +0.3 356,303 - B158DRAFT_2209 0.45 -0.0 356,303 - B158DRAFT_2209 0.45 +0.6 356,303 - B158DRAFT_2209 0.45 +0.2 356,312 + B158DRAFT_2209 0.45 +0.7 356,312 + B158DRAFT_2209 0.45 -0.0 356,312 + B158DRAFT_2209 0.45 -0.1 356,313 - B158DRAFT_2209 0.45 +1.2 356,320 - B158DRAFT_2209 0.45 +0.1 356,320 - B158DRAFT_2209 0.45 -0.5 356,320 - B158DRAFT_2209 0.45 +1.5 356,363 + B158DRAFT_2209 0.47 -0.5 356,371 - B158DRAFT_2209 0.48 -0.3 356,443 - B158DRAFT_2209 0.51 +0.6 356,448 + B158DRAFT_2209 0.51 +0.6 356,456 - B158DRAFT_2209 0.52 +0.0 356,456 - B158DRAFT_2209 0.52 +1.0 356,456 - B158DRAFT_2209 0.52 +0.2 356,456 - B158DRAFT_2209 0.52 +1.1 356,458 + B158DRAFT_2209 0.52 -0.4 356,458 + B158DRAFT_2209 0.52 +0.2 356,465 + B158DRAFT_2209 0.52 +0.5 356,465 + B158DRAFT_2209 0.52 -0.7 356,465 + B158DRAFT_2209 0.52 +0.4 356,466 - B158DRAFT_2209 0.52 -0.0 356,473 - B158DRAFT_2209 0.53 +1.3 356,542 - B158DRAFT_2209 0.56 -0.0 356,551 + B158DRAFT_2209 0.56 +0.3 356,570 + B158DRAFT_2209 0.57 +0.5 356,578 - B158DRAFT_2209 0.57 -0.2 356,578 - B158DRAFT_2209 0.57 +0.5 356,578 - B158DRAFT_2209 0.57 +0.6 356,585 - B158DRAFT_2209 0.58 -0.0 356,587 + B158DRAFT_2209 0.58 -4.6 356,595 + B158DRAFT_2209 0.58 +0.7 356,595 + B158DRAFT_2209 0.58 +0.6 356,595 + B158DRAFT_2209 0.58 -3.2 356,595 - B158DRAFT_2209 0.58 +0.6 356,597 + B158DRAFT_2209 0.58 +0.0 356,603 - B158DRAFT_2209 0.59 +0.6 356,605 - B158DRAFT_2209 0.59 +2.4 356,605 - B158DRAFT_2209 0.59 +0.8 356,630 - B158DRAFT_2209 0.60 +0.7 356,635 - B158DRAFT_2209 0.60 -0.5 356,648 - B158DRAFT_2209 0.61 +0.7 356,719 + B158DRAFT_2209 0.64 +0.5 356,817 + B158DRAFT_2209 0.69 +0.7 356,817 + B158DRAFT_2209 0.69 +0.5 356,817 + B158DRAFT_2209 0.69 +0.7 356,817 + B158DRAFT_2209 0.69 +0.5 356,817 + B158DRAFT_2209 0.69 -1.9 356,817 + B158DRAFT_2209 0.69 -0.6 356,817 + B158DRAFT_2209 0.69 -0.4 356,817 + B158DRAFT_2209 0.69 +0.0 356,817 + B158DRAFT_2209 0.69 -0.6 356,817 + B158DRAFT_2209 0.69 +1.0 356,817 + B158DRAFT_2209 0.69 +1.0 356,817 + B158DRAFT_2209 0.69 +1.3 356,825 - B158DRAFT_2209 0.69 +0.7 356,825 - B158DRAFT_2209 0.69 +0.4 356,825 - B158DRAFT_2209 0.69 +0.5 356,825 - B158DRAFT_2209 0.69 -1.6 356,825 - B158DRAFT_2209 0.69 +1.3 356,845 - B158DRAFT_2209 0.70 -0.2 356,869 + B158DRAFT_2209 0.71 +0.9 356,869 + B158DRAFT_2209 0.71 +0.5 356,923 - B158DRAFT_2209 0.74 +1.0 356,984 + B158DRAFT_2209 0.76 +0.6 356,984 + B158DRAFT_2209 0.76 -0.0 356,984 + B158DRAFT_2209 0.76 +0.8 356,984 + B158DRAFT_2209 0.76 +0.5 356,984 + B158DRAFT_2209 0.76 +0.7 356,984 + B158DRAFT_2209 0.76 +0.5 356,984 + B158DRAFT_2209 0.76 +0.8 356,987 - B158DRAFT_2209 0.77 +0.9 356,992 - B158DRAFT_2209 0.77 +0.6 356,992 - B158DRAFT_2209 0.77 +0.5 357,140 - B158DRAFT_2209 0.84 +0.5 357,141 + B158DRAFT_2209 0.84 +0.4 357,149 - B158DRAFT_2209 0.84 +0.0 357,179 + B158DRAFT_2209 0.86 -0.1 357,179 + B158DRAFT_2209 0.86 +0.3 357,245 + B158DRAFT_2209 0.89 +0.1 357,280 - +0.7 357,288 + +0.6 357,369 + +0.5 357,371 + +1.0 357,377 - +0.8 357,379 - -0.4 357,443 - +1.0 357,460 - +0.4 357,490 + +0.6 357,490 + +0.4 357,498 - +0.3 357,584 + +1.0 357,584 + -0.8 357,591 + -0.3 357,591 + +0.0 357,648 + -0.5 357,648 + +0.9 357,648 + +0.1 357,648 + -0.6 357,648 + +0.6 357,648 + +0.5 357,648 + +0.5 357,656 - -0.3 357,656 - +0.5 357,656 - +1.4 357,656 - -0.2 357,656 - -1.0 357,656 - +1.2 357,656 - -0.3 357,656 - -0.4 357,777 + -0.9 357,777 + -0.1 357,793 + -0.0 357,826 + B158DRAFT_2210 0.11 -0.1 357,827 - B158DRAFT_2210 0.11 +0.3 357,827 - B158DRAFT_2210 0.11 -0.2 357,834 - B158DRAFT_2210 0.12 -3.0 357,862 - B158DRAFT_2210 0.15 -3.9 357,895 + B158DRAFT_2210 0.17 -1.9 358,011 + B158DRAFT_2210 0.27 -0.3 358,143 + B158DRAFT_2210 0.39 -0.6 358,149 - B158DRAFT_2210 0.39 -0.4 358,149 - B158DRAFT_2210 0.39 -1.4 358,204 - B158DRAFT_2210 0.44 -0.2 358,211 - B158DRAFT_2210 0.45 -2.3 358,231 - B158DRAFT_2210 0.46 -1.5 358,237 + B158DRAFT_2210 0.47 +0.5 358,239 - B158DRAFT_2210 0.47 -1.5 358,244 + B158DRAFT_2210 0.47 -0.8 358,244 + B158DRAFT_2210 0.47 -1.1 358,245 - B158DRAFT_2210 0.48 -0.3 358,252 - B158DRAFT_2210 0.48 -3.3 358,274 - B158DRAFT_2210 0.50 +0.7 358,333 + B158DRAFT_2210 0.55 -0.9 358,333 + B158DRAFT_2210 0.55 -0.8 358,333 + B158DRAFT_2210 0.55 -0.8 358,333 + B158DRAFT_2210 0.55 -1.8 358,354 + B158DRAFT_2210 0.57 -0.5 358,472 - B158DRAFT_2210 0.67 -0.2
Or see this region's nucleotide sequence