Experiment: m.b. methylglyoxal 0.005 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2202 and B158DRAFT_2203 overlap by 8 nucleotides B158DRAFT_2203 and B158DRAFT_2204 overlap by 11 nucleotides
B158DRAFT_2202: B158DRAFT_2202 - multisubunit sodium/proton antiporter, MrpD subunit (TC 2.A.63.1), at 345,833 to 347,323
_2202
B158DRAFT_2203: B158DRAFT_2203 - hypothetical protein, at 347,316 to 347,657
_2203
B158DRAFT_2204: B158DRAFT_2204 - multisubunit sodium/proton antiporter, MrpD subunit (TC 2.A.63.1), at 347,647 to 349,338
_2204
Position (kb) 347
348 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 346.316 kb on - strand, within B158DRAFT_2202 at 346.381 kb on + strand, within B158DRAFT_2202 at 346.406 kb on + strand, within B158DRAFT_2202 at 346.618 kb on + strand, within B158DRAFT_2202 at 346.695 kb on - strand, within B158DRAFT_2202 at 347.198 kb on + strand at 347.239 kb on - strand at 347.239 kb on - strand at 347.302 kb on + strand at 347.320 kb on - strand at 347.397 kb on - strand, within B158DRAFT_2203 at 347.539 kb on + strand, within B158DRAFT_2203 at 347.588 kb on + strand, within B158DRAFT_2203 at 347.601 kb on + strand, within B158DRAFT_2203 at 347.601 kb on + strand, within B158DRAFT_2203 at 347.609 kb on - strand, within B158DRAFT_2203 at 347.609 kb on - strand, within B158DRAFT_2203 at 347.706 kb on + strand at 347.755 kb on - strand at 347.779 kb on + strand at 348.064 kb on - strand, within B158DRAFT_2204 at 348.425 kb on + strand, within B158DRAFT_2204 at 348.586 kb on + strand, within B158DRAFT_2204
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. methylglyoxal 0.005 vol% remove 346,316 - B158DRAFT_2202 0.32 -4.9 346,381 + B158DRAFT_2202 0.37 -1.2 346,406 + B158DRAFT_2202 0.38 -2.5 346,618 + B158DRAFT_2202 0.53 -0.5 346,695 - B158DRAFT_2202 0.58 -2.6 347,198 + -3.2 347,239 - -4.1 347,239 - -2.2 347,302 + -1.6 347,320 - -2.2 347,397 - B158DRAFT_2203 0.24 -3.3 347,539 + B158DRAFT_2203 0.65 -2.9 347,588 + B158DRAFT_2203 0.80 -3.0 347,601 + B158DRAFT_2203 0.83 -2.2 347,601 + B158DRAFT_2203 0.83 -1.8 347,609 - B158DRAFT_2203 0.86 -2.2 347,609 - B158DRAFT_2203 0.86 -2.8 347,706 + -2.6 347,755 - -1.8 347,779 + -3.0 348,064 - B158DRAFT_2204 0.25 -2.9 348,425 + B158DRAFT_2204 0.46 +0.6 348,586 + B158DRAFT_2204 0.55 -2.9
Or see this region's nucleotide sequence