Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1948

Experiment: m.b. methylglyoxal 0.005 vol%

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_1947 and B158DRAFT_1948 are separated by 30 nucleotidesB158DRAFT_1948 and B158DRAFT_1949 are separated by 71 nucleotides B158DRAFT_1947: B158DRAFT_1947 - yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region, at 82,725 to 84,233 _1947 B158DRAFT_1948: B158DRAFT_1948 - ATPase, YjeE family, at 84,264 to 84,743 _1948 B158DRAFT_1949: B158DRAFT_1949 - N-acetylmuramoyl-L-alanine amidase, at 84,815 to 86,098 _1949 Position (kb) 84 85Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1 2at 83.291 kb on + strand, within B158DRAFT_1947at 83.307 kb on + strand, within B158DRAFT_1947at 83.312 kb on + strand, within B158DRAFT_1947at 83.315 kb on - strand, within B158DRAFT_1947at 83.376 kb on - strand, within B158DRAFT_1947at 83.384 kb on - strand, within B158DRAFT_1947at 83.387 kb on + strand, within B158DRAFT_1947at 83.390 kb on - strand, within B158DRAFT_1947at 83.400 kb on - strand, within B158DRAFT_1947at 83.413 kb on + strand, within B158DRAFT_1947at 83.420 kb on + strand, within B158DRAFT_1947at 83.454 kb on + strand, within B158DRAFT_1947at 83.454 kb on + strand, within B158DRAFT_1947at 83.454 kb on + strand, within B158DRAFT_1947at 83.462 kb on - strand, within B158DRAFT_1947at 83.462 kb on - strand, within B158DRAFT_1947at 83.462 kb on - strand, within B158DRAFT_1947at 83.530 kb on + strand, within B158DRAFT_1947at 83.540 kb on + strand, within B158DRAFT_1947at 83.540 kb on + strand, within B158DRAFT_1947at 83.548 kb on - strand, within B158DRAFT_1947at 83.577 kb on + strand, within B158DRAFT_1947at 83.577 kb on + strand, within B158DRAFT_1947at 83.585 kb on - strand, within B158DRAFT_1947at 83.625 kb on - strand, within B158DRAFT_1947at 83.627 kb on + strand, within B158DRAFT_1947at 83.656 kb on + strand, within B158DRAFT_1947at 83.686 kb on + strand, within B158DRAFT_1947at 83.686 kb on + strand, within B158DRAFT_1947at 83.686 kb on + strand, within B158DRAFT_1947at 83.686 kb on + strand, within B158DRAFT_1947at 83.686 kb on + strand, within B158DRAFT_1947at 83.686 kb on + strand, within B158DRAFT_1947at 83.686 kb on + strand, within B158DRAFT_1947at 83.686 kb on + strand, within B158DRAFT_1947at 83.686 kb on + strand, within B158DRAFT_1947at 83.686 kb on + strand, within B158DRAFT_1947at 83.686 kb on + strand, within B158DRAFT_1947at 83.686 kb on + strand, within B158DRAFT_1947at 83.686 kb on + strand, within B158DRAFT_1947at 83.686 kb on + strand, within B158DRAFT_1947at 83.686 kb on + strand, within B158DRAFT_1947at 83.686 kb on + strand, within B158DRAFT_1947at 83.686 kb on + strand, within B158DRAFT_1947at 83.686 kb on + strand, within B158DRAFT_1947at 83.686 kb on + strand, within B158DRAFT_1947at 83.686 kb on + strand, within B158DRAFT_1947at 83.686 kb on + strand, within B158DRAFT_1947at 83.686 kb on + strand, within B158DRAFT_1947at 83.686 kb on + strand, within B158DRAFT_1947at 83.686 kb on + strand, within B158DRAFT_1947at 83.686 kb on + strand, within B158DRAFT_1947at 83.686 kb on + strand, within B158DRAFT_1947at 83.686 kb on + strand, within B158DRAFT_1947at 83.686 kb on + strand, within B158DRAFT_1947at 83.686 kb on + strand, within B158DRAFT_1947at 83.686 kb on + strand, within B158DRAFT_1947at 83.686 kb on + strand, within B158DRAFT_1947at 83.686 kb on + strand, within B158DRAFT_1947at 83.686 kb on + strand, within B158DRAFT_1947at 83.686 kb on + strand, within B158DRAFT_1947at 83.686 kb on + strand, within B158DRAFT_1947at 83.686 kb on + strand, within B158DRAFT_1947at 83.686 kb on + strand, within B158DRAFT_1947at 83.686 kb on + strand, within B158DRAFT_1947at 83.686 kb on + strand, within B158DRAFT_1947at 83.686 kb on + strand, within B158DRAFT_1947at 83.686 kb on + strand, within B158DRAFT_1947at 83.689 kb on - strand, within B158DRAFT_1947at 83.694 kb on - strand, within B158DRAFT_1947at 83.694 kb on - strand, within B158DRAFT_1947at 83.694 kb on - strand, within B158DRAFT_1947at 83.694 kb on - strand, within B158DRAFT_1947at 83.694 kb on - strand, within B158DRAFT_1947at 83.694 kb on - strand, within B158DRAFT_1947at 83.694 kb on - strand, within B158DRAFT_1947at 83.694 kb on - strand, within B158DRAFT_1947at 83.694 kb on - strand, within B158DRAFT_1947at 83.694 kb on - strand, within B158DRAFT_1947at 83.694 kb on - strand, within B158DRAFT_1947at 83.694 kb on - strand, within B158DRAFT_1947at 83.694 kb on - strand, within B158DRAFT_1947at 83.694 kb on - strand, within B158DRAFT_1947at 83.694 kb on - strand, within B158DRAFT_1947at 83.694 kb on - strand, within B158DRAFT_1947at 83.694 kb on - strand, within B158DRAFT_1947at 83.694 kb on - strand, within B158DRAFT_1947at 83.694 kb on - strand, within B158DRAFT_1947at 83.694 kb on - strand, within B158DRAFT_1947at 83.694 kb on - strand, within B158DRAFT_1947at 83.694 kb on - strand, within B158DRAFT_1947at 83.694 kb on - strand, within B158DRAFT_1947at 83.694 kb on - strand, within B158DRAFT_1947at 83.694 kb on - strand, within B158DRAFT_1947at 83.694 kb on - strand, within B158DRAFT_1947at 83.694 kb on - strand, within B158DRAFT_1947at 83.694 kb on - strand, within B158DRAFT_1947at 83.696 kb on + strand, within B158DRAFT_1947at 83.696 kb on + strand, within B158DRAFT_1947at 83.696 kb on + strand, within B158DRAFT_1947at 83.696 kb on + strand, within B158DRAFT_1947at 83.696 kb on + strand, within B158DRAFT_1947at 83.696 kb on + strand, within B158DRAFT_1947at 83.696 kb on + strand, within B158DRAFT_1947at 83.696 kb on + strand, within B158DRAFT_1947at 83.696 kb on + strand, within B158DRAFT_1947at 83.696 kb on + strand, within B158DRAFT_1947at 83.696 kb on + strand, within B158DRAFT_1947at 83.696 kb on + strand, within B158DRAFT_1947at 83.696 kb on + strand, within B158DRAFT_1947at 83.704 kb on - strand, within B158DRAFT_1947at 83.704 kb on - strand, within B158DRAFT_1947at 83.704 kb on - strand, within B158DRAFT_1947at 83.704 kb on - strand, within B158DRAFT_1947at 83.704 kb on - strand, within B158DRAFT_1947at 83.704 kb on - strand, within B158DRAFT_1947at 83.704 kb on - strand, within B158DRAFT_1947at 83.704 kb on - strand, within B158DRAFT_1947at 83.704 kb on - strand, within B158DRAFT_1947at 83.704 kb on - strand, within B158DRAFT_1947at 83.704 kb on - strand, within B158DRAFT_1947at 83.704 kb on - strand, within B158DRAFT_1947at 83.704 kb on - strand, within B158DRAFT_1947at 83.704 kb on - strand, within B158DRAFT_1947at 83.704 kb on - strand, within B158DRAFT_1947at 83.704 kb on - strand, within B158DRAFT_1947at 83.704 kb on - strand, within B158DRAFT_1947at 83.704 kb on - strand, within B158DRAFT_1947at 83.704 kb on - strand, within B158DRAFT_1947at 83.704 kb on - strand, within B158DRAFT_1947at 83.732 kb on + strand, within B158DRAFT_1947at 83.733 kb on + strand, within B158DRAFT_1947at 83.743 kb on + strand, within B158DRAFT_1947at 83.751 kb on - strand, within B158DRAFT_1947at 83.751 kb on - strand, within B158DRAFT_1947at 83.775 kb on - strand, within B158DRAFT_1947at 83.807 kb on - strand, within B158DRAFT_1947at 83.882 kb on - strand, within B158DRAFT_1947at 84.022 kb on + strand, within B158DRAFT_1947at 84.027 kb on + strand, within B158DRAFT_1947at 84.055 kb on + strand, within B158DRAFT_1947at 84.069 kb on + strand, within B158DRAFT_1947at 84.082 kb on + strand, within B158DRAFT_1947at 84.082 kb on + strand, within B158DRAFT_1947at 84.082 kb on + strand, within B158DRAFT_1947at 84.095 kb on + strandat 84.095 kb on + strandat 84.095 kb on + strandat 84.095 kb on + strandat 84.095 kb on + strandat 84.095 kb on + strandat 84.269 kb on + strandat 84.738 kb on + strandat 84.803 kb on - strandat 84.818 kb on - strandat 84.913 kb on - strandat 84.913 kb on - strandat 84.986 kb on - strand, within B158DRAFT_1949at 84.993 kb on - strand, within B158DRAFT_1949at 85.143 kb on + strand, within B158DRAFT_1949at 85.213 kb on - strand, within B158DRAFT_1949at 85.247 kb on + strand, within B158DRAFT_1949at 85.247 kb on + strand, within B158DRAFT_1949at 85.415 kb on + strand, within B158DRAFT_1949at 85.423 kb on - strand, within B158DRAFT_1949at 85.442 kb on - strand, within B158DRAFT_1949at 85.444 kb on + strand, within B158DRAFT_1949at 85.476 kb on - strand, within B158DRAFT_1949at 85.528 kb on + strand, within B158DRAFT_1949at 85.528 kb on + strand, within B158DRAFT_1949at 85.528 kb on + strand, within B158DRAFT_1949at 85.528 kb on + strand, within B158DRAFT_1949at 85.536 kb on - strand, within B158DRAFT_1949at 85.536 kb on - strand, within B158DRAFT_1949at 85.571 kb on + strand, within B158DRAFT_1949at 85.574 kb on - strand, within B158DRAFT_1949at 85.576 kb on + strand, within B158DRAFT_1949at 85.593 kb on + strand, within B158DRAFT_1949at 85.594 kb on - strand, within B158DRAFT_1949at 85.594 kb on - strand, within B158DRAFT_1949at 85.601 kb on - strand, within B158DRAFT_1949at 85.601 kb on - strand, within B158DRAFT_1949at 85.601 kb on - strand, within B158DRAFT_1949at 85.601 kb on - strand, within B158DRAFT_1949at 85.601 kb on - strand, within B158DRAFT_1949at 85.604 kb on - strand, within B158DRAFT_1949at 85.629 kb on + strand, within B158DRAFT_1949at 85.637 kb on - strand, within B158DRAFT_1949at 85.674 kb on + strand, within B158DRAFT_1949at 85.674 kb on + strand, within B158DRAFT_1949at 85.674 kb on + strand, within B158DRAFT_1949at 85.674 kb on + strand, within B158DRAFT_1949at 85.682 kb on - strand, within B158DRAFT_1949at 85.682 kb on - strand, within B158DRAFT_1949at 85.692 kb on - strand, within B158DRAFT_1949

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. methylglyoxal 0.005 vol%
remove
83,291 + B158DRAFT_1947 0.38 +0.8
83,307 + B158DRAFT_1947 0.39 +0.4
83,312 + B158DRAFT_1947 0.39 +0.3
83,315 - B158DRAFT_1947 0.39 +0.6
83,376 - B158DRAFT_1947 0.43 +0.9
83,384 - B158DRAFT_1947 0.44 +0.3
83,387 + B158DRAFT_1947 0.44 +0.1
83,390 - B158DRAFT_1947 0.44 +0.9
83,400 - B158DRAFT_1947 0.45 -0.1
83,413 + B158DRAFT_1947 0.46 +0.5
83,420 + B158DRAFT_1947 0.46 +0.5
83,454 + B158DRAFT_1947 0.48 +0.9
83,454 + B158DRAFT_1947 0.48 +0.2
83,454 + B158DRAFT_1947 0.48 +0.1
83,462 - B158DRAFT_1947 0.49 +0.2
83,462 - B158DRAFT_1947 0.49 +0.5
83,462 - B158DRAFT_1947 0.49 -0.7
83,530 + B158DRAFT_1947 0.53 +0.3
83,540 + B158DRAFT_1947 0.54 +1.0
83,540 + B158DRAFT_1947 0.54 +0.3
83,548 - B158DRAFT_1947 0.55 +0.2
83,577 + B158DRAFT_1947 0.56 +0.5
83,577 + B158DRAFT_1947 0.56 +1.1
83,585 - B158DRAFT_1947 0.57 +0.5
83,625 - B158DRAFT_1947 0.60 -2.0
83,627 + B158DRAFT_1947 0.60 +0.0
83,656 + B158DRAFT_1947 0.62 -0.2
83,686 + B158DRAFT_1947 0.64 +0.2
83,686 + B158DRAFT_1947 0.64 -0.4
83,686 + B158DRAFT_1947 0.64 -0.9
83,686 + B158DRAFT_1947 0.64 -0.1
83,686 + B158DRAFT_1947 0.64 -0.2
83,686 + B158DRAFT_1947 0.64 +0.4
83,686 + B158DRAFT_1947 0.64 -0.2
83,686 + B158DRAFT_1947 0.64 +0.5
83,686 + B158DRAFT_1947 0.64 -0.8
83,686 + B158DRAFT_1947 0.64 +0.1
83,686 + B158DRAFT_1947 0.64 +0.5
83,686 + B158DRAFT_1947 0.64 +0.6
83,686 + B158DRAFT_1947 0.64 +0.6
83,686 + B158DRAFT_1947 0.64 +0.0
83,686 + B158DRAFT_1947 0.64 -0.3
83,686 + B158DRAFT_1947 0.64 +0.2
83,686 + B158DRAFT_1947 0.64 +0.6
83,686 + B158DRAFT_1947 0.64 -0.2
83,686 + B158DRAFT_1947 0.64 +0.3
83,686 + B158DRAFT_1947 0.64 -0.5
83,686 + B158DRAFT_1947 0.64 +0.4
83,686 + B158DRAFT_1947 0.64 -0.2
83,686 + B158DRAFT_1947 0.64 -0.1
83,686 + B158DRAFT_1947 0.64 +1.0
83,686 + B158DRAFT_1947 0.64 -0.2
83,686 + B158DRAFT_1947 0.64 +1.7
83,686 + B158DRAFT_1947 0.64 +1.0
83,686 + B158DRAFT_1947 0.64 +1.0
83,686 + B158DRAFT_1947 0.64 +0.3
83,686 + B158DRAFT_1947 0.64 +1.0
83,686 + B158DRAFT_1947 0.64 -2.8
83,686 + B158DRAFT_1947 0.64 +0.5
83,686 + B158DRAFT_1947 0.64 +0.4
83,686 + B158DRAFT_1947 0.64 +0.7
83,686 + B158DRAFT_1947 0.64 -0.4
83,686 + B158DRAFT_1947 0.64 +0.5
83,686 + B158DRAFT_1947 0.64 -0.0
83,686 + B158DRAFT_1947 0.64 +0.9
83,686 + B158DRAFT_1947 0.64 +0.7
83,686 + B158DRAFT_1947 0.64 +0.2
83,686 + B158DRAFT_1947 0.64 -0.3
83,689 - B158DRAFT_1947 0.64 -0.7
83,694 - B158DRAFT_1947 0.64 -0.1
83,694 - B158DRAFT_1947 0.64 -1.0
83,694 - B158DRAFT_1947 0.64 +0.7
83,694 - B158DRAFT_1947 0.64 +1.0
83,694 - B158DRAFT_1947 0.64 +1.0
83,694 - B158DRAFT_1947 0.64 +0.8
83,694 - B158DRAFT_1947 0.64 +0.6
83,694 - B158DRAFT_1947 0.64 +0.1
83,694 - B158DRAFT_1947 0.64 +0.8
83,694 - B158DRAFT_1947 0.64 +0.9
83,694 - B158DRAFT_1947 0.64 +0.3
83,694 - B158DRAFT_1947 0.64 -1.6
83,694 - B158DRAFT_1947 0.64 +0.1
83,694 - B158DRAFT_1947 0.64 +0.1
83,694 - B158DRAFT_1947 0.64 +0.5
83,694 - B158DRAFT_1947 0.64 +0.4
83,694 - B158DRAFT_1947 0.64 -1.9
83,694 - B158DRAFT_1947 0.64 +0.1
83,694 - B158DRAFT_1947 0.64 +0.4
83,694 - B158DRAFT_1947 0.64 +0.0
83,694 - B158DRAFT_1947 0.64 +0.6
83,694 - B158DRAFT_1947 0.64 -0.2
83,694 - B158DRAFT_1947 0.64 -0.6
83,694 - B158DRAFT_1947 0.64 +1.1
83,694 - B158DRAFT_1947 0.64 +0.3
83,694 - B158DRAFT_1947 0.64 +0.4
83,694 - B158DRAFT_1947 0.64 +0.9
83,694 - B158DRAFT_1947 0.64 +0.7
83,696 + B158DRAFT_1947 0.64 +1.0
83,696 + B158DRAFT_1947 0.64 +0.3
83,696 + B158DRAFT_1947 0.64 +0.1
83,696 + B158DRAFT_1947 0.64 -0.3
83,696 + B158DRAFT_1947 0.64 -0.4
83,696 + B158DRAFT_1947 0.64 +0.0
83,696 + B158DRAFT_1947 0.64 +0.2
83,696 + B158DRAFT_1947 0.64 -0.2
83,696 + B158DRAFT_1947 0.64 +1.0
83,696 + B158DRAFT_1947 0.64 +1.2
83,696 + B158DRAFT_1947 0.64 +0.2
83,696 + B158DRAFT_1947 0.64 -1.5
83,696 + B158DRAFT_1947 0.64 +1.8
83,704 - B158DRAFT_1947 0.65 +0.7
83,704 - B158DRAFT_1947 0.65 +0.2
83,704 - B158DRAFT_1947 0.65 -3.0
83,704 - B158DRAFT_1947 0.65 +0.6
83,704 - B158DRAFT_1947 0.65 +0.9
83,704 - B158DRAFT_1947 0.65 +0.7
83,704 - B158DRAFT_1947 0.65 +0.1
83,704 - B158DRAFT_1947 0.65 +0.6
83,704 - B158DRAFT_1947 0.65 +0.8
83,704 - B158DRAFT_1947 0.65 +0.3
83,704 - B158DRAFT_1947 0.65 +0.1
83,704 - B158DRAFT_1947 0.65 +1.3
83,704 - B158DRAFT_1947 0.65 +0.1
83,704 - B158DRAFT_1947 0.65 -0.0
83,704 - B158DRAFT_1947 0.65 +0.0
83,704 - B158DRAFT_1947 0.65 -0.8
83,704 - B158DRAFT_1947 0.65 +0.6
83,704 - B158DRAFT_1947 0.65 +0.9
83,704 - B158DRAFT_1947 0.65 -1.5
83,704 - B158DRAFT_1947 0.65 -0.4
83,732 + B158DRAFT_1947 0.67 +0.5
83,733 + B158DRAFT_1947 0.67 +1.3
83,743 + B158DRAFT_1947 0.67 +0.7
83,751 - B158DRAFT_1947 0.68 +0.5
83,751 - B158DRAFT_1947 0.68 +0.2
83,775 - B158DRAFT_1947 0.70 -0.3
83,807 - B158DRAFT_1947 0.72 +0.3
83,882 - B158DRAFT_1947 0.77 -0.1
84,022 + B158DRAFT_1947 0.86 +1.0
84,027 + B158DRAFT_1947 0.86 +0.1
84,055 + B158DRAFT_1947 0.88 -0.5
84,069 + B158DRAFT_1947 0.89 +0.1
84,082 + B158DRAFT_1947 0.90 +1.7
84,082 + B158DRAFT_1947 0.90 -1.5
84,082 + B158DRAFT_1947 0.90 +0.3
84,095 + +0.7
84,095 + -0.2
84,095 + +0.6
84,095 + -1.1
84,095 + -2.5
84,095 + +0.4
84,269 + -1.0
84,738 + -0.2
84,803 - +1.3
84,818 - +0.2
84,913 - -0.0
84,913 - -0.7
84,986 - B158DRAFT_1949 0.13 -0.7
84,993 - B158DRAFT_1949 0.14 -1.3
85,143 + B158DRAFT_1949 0.26 -0.0
85,213 - B158DRAFT_1949 0.31 -0.4
85,247 + B158DRAFT_1949 0.34 -1.8
85,247 + B158DRAFT_1949 0.34 -0.0
85,415 + B158DRAFT_1949 0.47 +0.2
85,423 - B158DRAFT_1949 0.47 -0.4
85,442 - B158DRAFT_1949 0.49 -1.3
85,444 + B158DRAFT_1949 0.49 -0.5
85,476 - B158DRAFT_1949 0.51 +0.6
85,528 + B158DRAFT_1949 0.56 -0.9
85,528 + B158DRAFT_1949 0.56 -5.9
85,528 + B158DRAFT_1949 0.56 -0.4
85,528 + B158DRAFT_1949 0.56 -1.9
85,536 - B158DRAFT_1949 0.56 +0.0
85,536 - B158DRAFT_1949 0.56 +0.8
85,571 + B158DRAFT_1949 0.59 -0.4
85,574 - B158DRAFT_1949 0.59 -0.2
85,576 + B158DRAFT_1949 0.59 -0.7
85,593 + B158DRAFT_1949 0.61 -3.7
85,594 - B158DRAFT_1949 0.61 -0.4
85,594 - B158DRAFT_1949 0.61 -0.4
85,601 - B158DRAFT_1949 0.61 -0.2
85,601 - B158DRAFT_1949 0.61 +0.5
85,601 - B158DRAFT_1949 0.61 -0.2
85,601 - B158DRAFT_1949 0.61 +0.6
85,601 - B158DRAFT_1949 0.61 -2.2
85,604 - B158DRAFT_1949 0.61 -1.1
85,629 + B158DRAFT_1949 0.63 -1.2
85,637 - B158DRAFT_1949 0.64 +0.7
85,674 + B158DRAFT_1949 0.67 -0.2
85,674 + B158DRAFT_1949 0.67 -0.5
85,674 + B158DRAFT_1949 0.67 -0.3
85,674 + B158DRAFT_1949 0.67 -2.5
85,682 - B158DRAFT_1949 0.68 -0.2
85,682 - B158DRAFT_1949 0.68 -0.4
85,692 - B158DRAFT_1949 0.68 -1.0

Or see this region's nucleotide sequence