Experiment: m.b. methylglyoxal 0.005 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1641 and B158DRAFT_1642 overlap by 8 nucleotides B158DRAFT_1642 and B158DRAFT_1643 are separated by 18 nucleotides
B158DRAFT_1641: B158DRAFT_1641 - type I site-specific deoxyribonuclease, HsdR family, at 1,705,652 to 1,708,894
_1641
B158DRAFT_1642: B158DRAFT_1642 - hypothetical protein, at 1,708,887 to 1,712,168
_1642
B158DRAFT_1643: B158DRAFT_1643 - Restriction endonuclease S subunits, at 1,712,187 to 1,713,545
_1643
Position (kb)
1708
1709
1710
1711
1712
1713 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1707.909 kb on + strand, within B158DRAFT_1641 at 1707.958 kb on - strand, within B158DRAFT_1641 at 1708.011 kb on + strand, within B158DRAFT_1641 at 1708.011 kb on + strand, within B158DRAFT_1641 at 1708.011 kb on + strand, within B158DRAFT_1641 at 1708.011 kb on + strand, within B158DRAFT_1641 at 1708.011 kb on + strand, within B158DRAFT_1641 at 1708.011 kb on + strand, within B158DRAFT_1641 at 1708.019 kb on - strand, within B158DRAFT_1641 at 1708.019 kb on - strand, within B158DRAFT_1641 at 1708.019 kb on - strand, within B158DRAFT_1641 at 1708.019 kb on - strand, within B158DRAFT_1641 at 1708.142 kb on + strand, within B158DRAFT_1641 at 1708.156 kb on + strand, within B158DRAFT_1641 at 1708.234 kb on + strand, within B158DRAFT_1641 at 1708.240 kb on - strand, within B158DRAFT_1641 at 1708.382 kb on - strand, within B158DRAFT_1641 at 1708.664 kb on + strand at 1708.739 kb on - strand at 1708.803 kb on + strand at 1708.812 kb on - strand at 1708.827 kb on + strand at 1708.832 kb on + strand at 1708.835 kb on - strand at 1708.835 kb on - strand at 1708.840 kb on - strand at 1708.864 kb on + strand at 1709.062 kb on - strand at 1709.096 kb on + strand at 1709.104 kb on - strand at 1709.126 kb on + strand at 1709.177 kb on + strand at 1709.813 kb on + strand, within B158DRAFT_1642 at 1709.813 kb on - strand, within B158DRAFT_1642 at 1709.821 kb on - strand, within B158DRAFT_1642 at 1709.869 kb on + strand, within B158DRAFT_1642 at 1709.944 kb on - strand, within B158DRAFT_1642 at 1709.975 kb on - strand, within B158DRAFT_1642 at 1710.016 kb on - strand, within B158DRAFT_1642 at 1710.129 kb on + strand, within B158DRAFT_1642 at 1710.129 kb on + strand, within B158DRAFT_1642 at 1710.137 kb on - strand, within B158DRAFT_1642 at 1710.147 kb on - strand, within B158DRAFT_1642 at 1710.182 kb on + strand, within B158DRAFT_1642 at 1710.476 kb on - strand, within B158DRAFT_1642 at 1710.494 kb on - strand, within B158DRAFT_1642 at 1710.539 kb on + strand, within B158DRAFT_1642 at 1710.539 kb on + strand, within B158DRAFT_1642 at 1710.714 kb on + strand, within B158DRAFT_1642 at 1710.881 kb on + strand, within B158DRAFT_1642 at 1711.033 kb on - strand, within B158DRAFT_1642 at 1711.073 kb on - strand, within B158DRAFT_1642 at 1711.148 kb on + strand, within B158DRAFT_1642 at 1711.233 kb on - strand, within B158DRAFT_1642 at 1711.682 kb on + strand, within B158DRAFT_1642 at 1712.018 kb on + strand at 1712.046 kb on + strand at 1712.054 kb on - strand at 1712.072 kb on - strand at 1712.137 kb on - strand at 1712.393 kb on - strand, within B158DRAFT_1643 at 1712.421 kb on + strand, within B158DRAFT_1643 at 1712.429 kb on - strand, within B158DRAFT_1643 at 1712.429 kb on - strand, within B158DRAFT_1643 at 1712.435 kb on - strand, within B158DRAFT_1643 at 1712.435 kb on - strand, within B158DRAFT_1643 at 1712.485 kb on + strand, within B158DRAFT_1643 at 1712.485 kb on + strand, within B158DRAFT_1643 at 1712.488 kb on - strand, within B158DRAFT_1643 at 1712.567 kb on + strand, within B158DRAFT_1643 at 1712.575 kb on - strand, within B158DRAFT_1643 at 1712.575 kb on - strand, within B158DRAFT_1643 at 1712.619 kb on + strand, within B158DRAFT_1643 at 1712.682 kb on + strand, within B158DRAFT_1643 at 1712.733 kb on - strand, within B158DRAFT_1643 at 1712.791 kb on + strand, within B158DRAFT_1643 at 1712.818 kb on - strand, within B158DRAFT_1643 at 1712.846 kb on + strand, within B158DRAFT_1643 at 1712.854 kb on - strand, within B158DRAFT_1643 at 1712.854 kb on - strand, within B158DRAFT_1643 at 1712.854 kb on - strand, within B158DRAFT_1643 at 1712.903 kb on - strand, within B158DRAFT_1643 at 1713.017 kb on + strand, within B158DRAFT_1643 at 1713.025 kb on - strand, within B158DRAFT_1643 at 1713.025 kb on - strand, within B158DRAFT_1643 at 1713.159 kb on + strand, within B158DRAFT_1643 at 1713.159 kb on + strand, within B158DRAFT_1643
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. methylglyoxal 0.005 vol% remove 1,707,909 + B158DRAFT_1641 0.70 +0.8 1,707,958 - B158DRAFT_1641 0.71 +0.3 1,708,011 + B158DRAFT_1641 0.73 +0.6 1,708,011 + B158DRAFT_1641 0.73 -2.4 1,708,011 + B158DRAFT_1641 0.73 +0.9 1,708,011 + B158DRAFT_1641 0.73 +0.3 1,708,011 + B158DRAFT_1641 0.73 -1.3 1,708,011 + B158DRAFT_1641 0.73 -1.4 1,708,019 - B158DRAFT_1641 0.73 +0.7 1,708,019 - B158DRAFT_1641 0.73 +1.5 1,708,019 - B158DRAFT_1641 0.73 -0.1 1,708,019 - B158DRAFT_1641 0.73 -0.8 1,708,142 + B158DRAFT_1641 0.77 +0.4 1,708,156 + B158DRAFT_1641 0.77 +0.8 1,708,234 + B158DRAFT_1641 0.80 +1.0 1,708,240 - B158DRAFT_1641 0.80 +0.2 1,708,382 - B158DRAFT_1641 0.84 -0.1 1,708,664 + -1.2 1,708,739 - +1.0 1,708,803 + +0.1 1,708,812 - -0.2 1,708,827 + +0.0 1,708,832 + +0.3 1,708,835 - +1.0 1,708,835 - +1.1 1,708,840 - +0.5 1,708,864 + -1.0 1,709,062 - -1.7 1,709,096 + +0.0 1,709,104 - -2.3 1,709,126 + -1.0 1,709,177 + -4.2 1,709,813 + B158DRAFT_1642 0.28 -0.2 1,709,813 - B158DRAFT_1642 0.28 +0.2 1,709,821 - B158DRAFT_1642 0.28 +1.0 1,709,869 + B158DRAFT_1642 0.30 +1.3 1,709,944 - B158DRAFT_1642 0.32 +0.4 1,709,975 - B158DRAFT_1642 0.33 +0.2 1,710,016 - B158DRAFT_1642 0.34 -0.8 1,710,129 + B158DRAFT_1642 0.38 +0.1 1,710,129 + B158DRAFT_1642 0.38 +0.8 1,710,137 - B158DRAFT_1642 0.38 -0.2 1,710,147 - B158DRAFT_1642 0.38 -0.5 1,710,182 + B158DRAFT_1642 0.39 +0.8 1,710,476 - B158DRAFT_1642 0.48 -0.1 1,710,494 - B158DRAFT_1642 0.49 +0.2 1,710,539 + B158DRAFT_1642 0.50 -0.3 1,710,539 + B158DRAFT_1642 0.50 +1.2 1,710,714 + B158DRAFT_1642 0.56 -1.1 1,710,881 + B158DRAFT_1642 0.61 +0.4 1,711,033 - B158DRAFT_1642 0.65 -0.3 1,711,073 - B158DRAFT_1642 0.67 +0.2 1,711,148 + B158DRAFT_1642 0.69 -0.0 1,711,233 - B158DRAFT_1642 0.71 +0.1 1,711,682 + B158DRAFT_1642 0.85 +0.1 1,712,018 + +0.4 1,712,046 + -0.3 1,712,054 - +0.9 1,712,072 - +0.8 1,712,137 - +0.2 1,712,393 - B158DRAFT_1643 0.15 -4.0 1,712,421 + B158DRAFT_1643 0.17 -0.8 1,712,429 - B158DRAFT_1643 0.18 -0.0 1,712,429 - B158DRAFT_1643 0.18 +0.6 1,712,435 - B158DRAFT_1643 0.18 -0.2 1,712,435 - B158DRAFT_1643 0.18 -0.4 1,712,485 + B158DRAFT_1643 0.22 +0.2 1,712,485 + B158DRAFT_1643 0.22 -0.0 1,712,488 - B158DRAFT_1643 0.22 +0.5 1,712,567 + B158DRAFT_1643 0.28 +0.7 1,712,575 - B158DRAFT_1643 0.29 +0.4 1,712,575 - B158DRAFT_1643 0.29 +0.1 1,712,619 + B158DRAFT_1643 0.32 +0.4 1,712,682 + B158DRAFT_1643 0.36 -0.2 1,712,733 - B158DRAFT_1643 0.40 +0.1 1,712,791 + B158DRAFT_1643 0.44 -0.4 1,712,818 - B158DRAFT_1643 0.46 -0.1 1,712,846 + B158DRAFT_1643 0.48 +0.3 1,712,854 - B158DRAFT_1643 0.49 -0.1 1,712,854 - B158DRAFT_1643 0.49 -0.6 1,712,854 - B158DRAFT_1643 0.49 +0.5 1,712,903 - B158DRAFT_1643 0.53 -0.1 1,713,017 + B158DRAFT_1643 0.61 +0.1 1,713,025 - B158DRAFT_1643 0.62 +1.2 1,713,025 - B158DRAFT_1643 0.62 +1.5 1,713,159 + B158DRAFT_1643 0.72 +0.4 1,713,159 + B158DRAFT_1643 0.72 +0.3
Or see this region's nucleotide sequence