Experiment: m.b. methylglyoxal 0.005 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1588 and B158DRAFT_1589 overlap by 8 nucleotides B158DRAFT_1589 and B158DRAFT_1590 are separated by 441 nucleotides
B158DRAFT_1588: B158DRAFT_1588 - lipoprotein releasing system, transmembrane protein, LolC/E family, at 1,649,054 to 1,650,298
_1588
B158DRAFT_1589: B158DRAFT_1589 - lipoprotein releasing system, ATP-binding protein, at 1,650,291 to 1,650,977
_1589
B158DRAFT_1590: B158DRAFT_1590 - Uncharacterized protein conserved in bacteria, at 1,651,419 to 1,652,066
_1590
Position (kb)
1650
1651 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 1651.033 kb on + strand at 1651.033 kb on + strand at 1651.033 kb on + strand at 1651.033 kb on + strand at 1651.041 kb on - strand at 1651.041 kb on - strand at 1651.041 kb on - strand at 1651.041 kb on - strand at 1651.304 kb on + strand at 1651.362 kb on + strand at 1651.362 kb on + strand at 1651.362 kb on + strand at 1651.362 kb on + strand at 1651.370 kb on - strand at 1651.387 kb on + strand at 1651.395 kb on - strand at 1651.395 kb on - strand at 1651.527 kb on + strand, within B158DRAFT_1590 at 1651.563 kb on + strand, within B158DRAFT_1590 at 1651.571 kb on - strand, within B158DRAFT_1590 at 1651.600 kb on + strand, within B158DRAFT_1590 at 1651.608 kb on - strand, within B158DRAFT_1590 at 1651.608 kb on - strand, within B158DRAFT_1590 at 1651.608 kb on - strand, within B158DRAFT_1590 at 1651.608 kb on - strand, within B158DRAFT_1590 at 1651.608 kb on - strand, within B158DRAFT_1590 at 1651.608 kb on - strand, within B158DRAFT_1590 at 1651.610 kb on + strand, within B158DRAFT_1590 at 1651.610 kb on + strand, within B158DRAFT_1590 at 1651.610 kb on + strand, within B158DRAFT_1590 at 1651.610 kb on + strand, within B158DRAFT_1590 at 1651.610 kb on + strand, within B158DRAFT_1590 at 1651.610 kb on + strand, within B158DRAFT_1590 at 1651.610 kb on + strand, within B158DRAFT_1590 at 1651.610 kb on + strand, within B158DRAFT_1590 at 1651.610 kb on + strand, within B158DRAFT_1590 at 1651.610 kb on + strand, within B158DRAFT_1590 at 1651.610 kb on + strand, within B158DRAFT_1590 at 1651.618 kb on - strand, within B158DRAFT_1590 at 1651.618 kb on - strand, within B158DRAFT_1590 at 1651.618 kb on - strand, within B158DRAFT_1590 at 1651.618 kb on - strand, within B158DRAFT_1590 at 1651.618 kb on - strand, within B158DRAFT_1590 at 1651.721 kb on + strand, within B158DRAFT_1590 at 1651.724 kb on - strand, within B158DRAFT_1590 at 1651.729 kb on - strand, within B158DRAFT_1590 at 1651.729 kb on - strand, within B158DRAFT_1590 at 1651.729 kb on - strand, within B158DRAFT_1590 at 1651.740 kb on + strand, within B158DRAFT_1590 at 1651.750 kb on - strand, within B158DRAFT_1590 at 1651.750 kb on - strand, within B158DRAFT_1590 at 1651.750 kb on - strand, within B158DRAFT_1590 at 1651.752 kb on - strand, within B158DRAFT_1590 at 1651.762 kb on - strand, within B158DRAFT_1590 at 1651.780 kb on + strand, within B158DRAFT_1590 at 1651.862 kb on - strand, within B158DRAFT_1590 at 1651.917 kb on - strand, within B158DRAFT_1590 at 1651.945 kb on + strand, within B158DRAFT_1590 at 1651.953 kb on - strand, within B158DRAFT_1590
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. methylglyoxal 0.005 vol% remove 1,651,033 + +0.4 1,651,033 + -0.1 1,651,033 + +0.6 1,651,033 + +1.4 1,651,041 - +1.1 1,651,041 - +0.0 1,651,041 - +0.9 1,651,041 - +1.0 1,651,304 + +0.2 1,651,362 + -1.0 1,651,362 + -0.2 1,651,362 + +0.6 1,651,362 + -0.4 1,651,370 - +0.6 1,651,387 + -0.5 1,651,395 - -0.2 1,651,395 - +0.0 1,651,527 + B158DRAFT_1590 0.17 -0.3 1,651,563 + B158DRAFT_1590 0.22 -3.1 1,651,571 - B158DRAFT_1590 0.23 -1.6 1,651,600 + B158DRAFT_1590 0.28 -1.4 1,651,608 - B158DRAFT_1590 0.29 -1.4 1,651,608 - B158DRAFT_1590 0.29 -1.1 1,651,608 - B158DRAFT_1590 0.29 -1.5 1,651,608 - B158DRAFT_1590 0.29 -3.6 1,651,608 - B158DRAFT_1590 0.29 -2.1 1,651,608 - B158DRAFT_1590 0.29 +0.8 1,651,610 + B158DRAFT_1590 0.29 -1.4 1,651,610 + B158DRAFT_1590 0.29 -1.3 1,651,610 + B158DRAFT_1590 0.29 -2.7 1,651,610 + B158DRAFT_1590 0.29 -2.3 1,651,610 + B158DRAFT_1590 0.29 -0.4 1,651,610 + B158DRAFT_1590 0.29 -1.7 1,651,610 + B158DRAFT_1590 0.29 -1.0 1,651,610 + B158DRAFT_1590 0.29 -0.6 1,651,610 + B158DRAFT_1590 0.29 -1.1 1,651,610 + B158DRAFT_1590 0.29 -0.3 1,651,610 + B158DRAFT_1590 0.29 -1.6 1,651,618 - B158DRAFT_1590 0.31 -0.6 1,651,618 - B158DRAFT_1590 0.31 -1.4 1,651,618 - B158DRAFT_1590 0.31 -1.3 1,651,618 - B158DRAFT_1590 0.31 -0.1 1,651,618 - B158DRAFT_1590 0.31 -0.2 1,651,721 + B158DRAFT_1590 0.47 -4.4 1,651,724 - B158DRAFT_1590 0.47 -0.7 1,651,729 - B158DRAFT_1590 0.48 +0.2 1,651,729 - B158DRAFT_1590 0.48 -2.0 1,651,729 - B158DRAFT_1590 0.48 -2.1 1,651,740 + B158DRAFT_1590 0.50 -0.6 1,651,750 - B158DRAFT_1590 0.51 +0.3 1,651,750 - B158DRAFT_1590 0.51 -1.3 1,651,750 - B158DRAFT_1590 0.51 -0.4 1,651,752 - B158DRAFT_1590 0.51 -1.4 1,651,762 - B158DRAFT_1590 0.53 -0.8 1,651,780 + B158DRAFT_1590 0.56 -2.1 1,651,862 - B158DRAFT_1590 0.68 -0.1 1,651,917 - B158DRAFT_1590 0.77 -1.3 1,651,945 + B158DRAFT_1590 0.81 -1.3 1,651,953 - B158DRAFT_1590 0.82 -5.0
Or see this region's nucleotide sequence