Experiment: m.b. methylglyoxal 0.005 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1438 and B158DRAFT_1439 overlap by 29 nucleotides B158DRAFT_1439 and B158DRAFT_1440 overlap by 4 nucleotides
B158DRAFT_1438: B158DRAFT_1438 - formiminoglutamate deiminase, at 1,489,694 to 1,491,103
_1438
B158DRAFT_1439: B158DRAFT_1439 - hypothetical protein, at 1,491,075 to 1,492,811
_1439
B158DRAFT_1440: B158DRAFT_1440 - ABC-type uncharacterized transport system, periplasmic component, at 1,492,808 to 1,493,821
_1440
Position (kb)
1491
1492
1493 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1490.120 kb on + strand, within B158DRAFT_1438 at 1490.322 kb on + strand, within B158DRAFT_1438 at 1490.322 kb on + strand, within B158DRAFT_1438 at 1490.328 kb on - strand, within B158DRAFT_1438 at 1490.360 kb on + strand, within B158DRAFT_1438 at 1490.360 kb on + strand, within B158DRAFT_1438 at 1490.360 kb on + strand, within B158DRAFT_1438 at 1490.368 kb on - strand, within B158DRAFT_1438 at 1490.381 kb on + strand, within B158DRAFT_1438 at 1490.381 kb on - strand, within B158DRAFT_1438 at 1490.391 kb on - strand, within B158DRAFT_1438 at 1490.393 kb on + strand, within B158DRAFT_1438 at 1490.444 kb on + strand, within B158DRAFT_1438 at 1490.462 kb on - strand, within B158DRAFT_1438 at 1490.473 kb on + strand, within B158DRAFT_1438 at 1490.480 kb on + strand, within B158DRAFT_1438 at 1490.481 kb on - strand, within B158DRAFT_1438 at 1490.483 kb on - strand, within B158DRAFT_1438 at 1490.505 kb on + strand, within B158DRAFT_1438 at 1490.537 kb on + strand, within B158DRAFT_1438 at 1490.555 kb on - strand, within B158DRAFT_1438 at 1490.657 kb on + strand, within B158DRAFT_1438 at 1490.722 kb on - strand, within B158DRAFT_1438 at 1490.724 kb on + strand, within B158DRAFT_1438 at 1490.724 kb on + strand, within B158DRAFT_1438 at 1490.732 kb on - strand, within B158DRAFT_1438 at 1490.732 kb on - strand, within B158DRAFT_1438 at 1490.804 kb on - strand, within B158DRAFT_1438 at 1490.893 kb on + strand, within B158DRAFT_1438 at 1490.901 kb on - strand, within B158DRAFT_1438 at 1491.120 kb on - strand at 1491.130 kb on - strand at 1491.130 kb on - strand at 1491.464 kb on + strand, within B158DRAFT_1439 at 1491.464 kb on + strand, within B158DRAFT_1439 at 1491.472 kb on - strand, within B158DRAFT_1439 at 1491.472 kb on - strand, within B158DRAFT_1439 at 1491.478 kb on + strand, within B158DRAFT_1439 at 1491.743 kb on - strand, within B158DRAFT_1439 at 1491.769 kb on + strand, within B158DRAFT_1439 at 1491.769 kb on + strand, within B158DRAFT_1439 at 1491.777 kb on - strand, within B158DRAFT_1439 at 1491.777 kb on - strand, within B158DRAFT_1439 at 1491.777 kb on - strand, within B158DRAFT_1439 at 1491.784 kb on - strand, within B158DRAFT_1439 at 1491.859 kb on + strand, within B158DRAFT_1439 at 1491.859 kb on + strand, within B158DRAFT_1439 at 1491.909 kb on + strand, within B158DRAFT_1439 at 1491.924 kb on - strand, within B158DRAFT_1439 at 1491.977 kb on + strand, within B158DRAFT_1439 at 1491.987 kb on - strand, within B158DRAFT_1439 at 1492.044 kb on + strand, within B158DRAFT_1439 at 1492.078 kb on + strand, within B158DRAFT_1439 at 1492.086 kb on - strand, within B158DRAFT_1439 at 1492.086 kb on - strand, within B158DRAFT_1439 at 1492.091 kb on - strand, within B158DRAFT_1439 at 1492.092 kb on - strand, within B158DRAFT_1439 at 1492.171 kb on + strand, within B158DRAFT_1439 at 1492.192 kb on + strand, within B158DRAFT_1439 at 1492.194 kb on - strand, within B158DRAFT_1439 at 1492.341 kb on - strand, within B158DRAFT_1439 at 1492.350 kb on + strand, within B158DRAFT_1439 at 1492.355 kb on + strand, within B158DRAFT_1439 at 1492.363 kb on - strand, within B158DRAFT_1439 at 1492.363 kb on - strand, within B158DRAFT_1439 at 1492.363 kb on - strand, within B158DRAFT_1439 at 1492.363 kb on - strand, within B158DRAFT_1439 at 1492.438 kb on - strand, within B158DRAFT_1439 at 1492.725 kb on - strand at 1492.875 kb on - strand at 1492.875 kb on - strand at 1492.918 kb on + strand, within B158DRAFT_1440 at 1492.920 kb on - strand, within B158DRAFT_1440 at 1492.944 kb on - strand, within B158DRAFT_1440 at 1493.039 kb on + strand, within B158DRAFT_1440 at 1493.127 kb on - strand, within B158DRAFT_1440 at 1493.127 kb on - strand, within B158DRAFT_1440 at 1493.127 kb on - strand, within B158DRAFT_1440 at 1493.134 kb on + strand, within B158DRAFT_1440 at 1493.267 kb on + strand, within B158DRAFT_1440 at 1493.267 kb on + strand, within B158DRAFT_1440 at 1493.274 kb on - strand, within B158DRAFT_1440 at 1493.275 kb on - strand, within B158DRAFT_1440 at 1493.275 kb on - strand, within B158DRAFT_1440 at 1493.358 kb on + strand, within B158DRAFT_1440 at 1493.429 kb on + strand, within B158DRAFT_1440 at 1493.437 kb on - strand, within B158DRAFT_1440 at 1493.437 kb on - strand, within B158DRAFT_1440 at 1493.472 kb on - strand, within B158DRAFT_1440 at 1493.474 kb on + strand, within B158DRAFT_1440 at 1493.496 kb on - strand, within B158DRAFT_1440 at 1493.496 kb on - strand, within B158DRAFT_1440 at 1493.508 kb on + strand, within B158DRAFT_1440 at 1493.602 kb on + strand, within B158DRAFT_1440 at 1493.680 kb on - strand, within B158DRAFT_1440 at 1493.680 kb on - strand, within B158DRAFT_1440 at 1493.680 kb on - strand, within B158DRAFT_1440 at 1493.772 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. methylglyoxal 0.005 vol% remove 1,490,120 + B158DRAFT_1438 0.30 -0.0 1,490,322 + B158DRAFT_1438 0.45 -1.2 1,490,322 + B158DRAFT_1438 0.45 +0.3 1,490,328 - B158DRAFT_1438 0.45 +0.1 1,490,360 + B158DRAFT_1438 0.47 -0.1 1,490,360 + B158DRAFT_1438 0.47 +0.4 1,490,360 + B158DRAFT_1438 0.47 +0.7 1,490,368 - B158DRAFT_1438 0.48 +0.2 1,490,381 + B158DRAFT_1438 0.49 -0.0 1,490,381 - B158DRAFT_1438 0.49 +0.5 1,490,391 - B158DRAFT_1438 0.49 +0.6 1,490,393 + B158DRAFT_1438 0.50 +0.3 1,490,444 + B158DRAFT_1438 0.53 -0.1 1,490,462 - B158DRAFT_1438 0.54 +0.7 1,490,473 + B158DRAFT_1438 0.55 -0.9 1,490,480 + B158DRAFT_1438 0.56 +0.7 1,490,481 - B158DRAFT_1438 0.56 -0.7 1,490,483 - B158DRAFT_1438 0.56 +0.5 1,490,505 + B158DRAFT_1438 0.58 +1.8 1,490,537 + B158DRAFT_1438 0.60 +0.7 1,490,555 - B158DRAFT_1438 0.61 -1.2 1,490,657 + B158DRAFT_1438 0.68 +1.2 1,490,722 - B158DRAFT_1438 0.73 -0.0 1,490,724 + B158DRAFT_1438 0.73 +0.4 1,490,724 + B158DRAFT_1438 0.73 +0.3 1,490,732 - B158DRAFT_1438 0.74 +0.2 1,490,732 - B158DRAFT_1438 0.74 -0.2 1,490,804 - B158DRAFT_1438 0.79 +0.5 1,490,893 + B158DRAFT_1438 0.85 +0.6 1,490,901 - B158DRAFT_1438 0.86 +0.8 1,491,120 - +0.7 1,491,130 - +0.3 1,491,130 - +0.0 1,491,464 + B158DRAFT_1439 0.22 -1.2 1,491,464 + B158DRAFT_1439 0.22 +0.7 1,491,472 - B158DRAFT_1439 0.23 -0.2 1,491,472 - B158DRAFT_1439 0.23 -0.1 1,491,478 + B158DRAFT_1439 0.23 +0.6 1,491,743 - B158DRAFT_1439 0.38 -0.4 1,491,769 + B158DRAFT_1439 0.40 +0.9 1,491,769 + B158DRAFT_1439 0.40 -2.2 1,491,777 - B158DRAFT_1439 0.40 -3.6 1,491,777 - B158DRAFT_1439 0.40 +0.5 1,491,777 - B158DRAFT_1439 0.40 +0.2 1,491,784 - B158DRAFT_1439 0.41 +0.6 1,491,859 + B158DRAFT_1439 0.45 +0.8 1,491,859 + B158DRAFT_1439 0.45 -1.4 1,491,909 + B158DRAFT_1439 0.48 +1.0 1,491,924 - B158DRAFT_1439 0.49 +1.2 1,491,977 + B158DRAFT_1439 0.52 -0.0 1,491,987 - B158DRAFT_1439 0.53 -0.7 1,492,044 + B158DRAFT_1439 0.56 +0.4 1,492,078 + B158DRAFT_1439 0.58 -1.0 1,492,086 - B158DRAFT_1439 0.58 -0.5 1,492,086 - B158DRAFT_1439 0.58 +0.6 1,492,091 - B158DRAFT_1439 0.58 +0.4 1,492,092 - B158DRAFT_1439 0.59 +0.5 1,492,171 + B158DRAFT_1439 0.63 +0.3 1,492,192 + B158DRAFT_1439 0.64 -0.2 1,492,194 - B158DRAFT_1439 0.64 -0.0 1,492,341 - B158DRAFT_1439 0.73 +0.7 1,492,350 + B158DRAFT_1439 0.73 -0.9 1,492,355 + B158DRAFT_1439 0.74 -0.2 1,492,363 - B158DRAFT_1439 0.74 +1.0 1,492,363 - B158DRAFT_1439 0.74 -0.3 1,492,363 - B158DRAFT_1439 0.74 +0.6 1,492,363 - B158DRAFT_1439 0.74 +0.6 1,492,438 - B158DRAFT_1439 0.78 +0.6 1,492,725 - +0.6 1,492,875 - +0.3 1,492,875 - +0.0 1,492,918 + B158DRAFT_1440 0.11 +0.4 1,492,920 - B158DRAFT_1440 0.11 +1.4 1,492,944 - B158DRAFT_1440 0.13 +0.5 1,493,039 + B158DRAFT_1440 0.23 -0.1 1,493,127 - B158DRAFT_1440 0.31 -1.4 1,493,127 - B158DRAFT_1440 0.31 -1.2 1,493,127 - B158DRAFT_1440 0.31 +0.4 1,493,134 + B158DRAFT_1440 0.32 +0.8 1,493,267 + B158DRAFT_1440 0.45 +0.7 1,493,267 + B158DRAFT_1440 0.45 +1.2 1,493,274 - B158DRAFT_1440 0.46 -1.2 1,493,275 - B158DRAFT_1440 0.46 +0.9 1,493,275 - B158DRAFT_1440 0.46 +1.0 1,493,358 + B158DRAFT_1440 0.54 +0.2 1,493,429 + B158DRAFT_1440 0.61 +0.3 1,493,437 - B158DRAFT_1440 0.62 -0.7 1,493,437 - B158DRAFT_1440 0.62 +0.0 1,493,472 - B158DRAFT_1440 0.65 -2.8 1,493,474 + B158DRAFT_1440 0.66 +0.5 1,493,496 - B158DRAFT_1440 0.68 +0.5 1,493,496 - B158DRAFT_1440 0.68 -0.6 1,493,508 + B158DRAFT_1440 0.69 +0.2 1,493,602 + B158DRAFT_1440 0.78 +0.7 1,493,680 - B158DRAFT_1440 0.86 +0.6 1,493,680 - B158DRAFT_1440 0.86 -0.1 1,493,680 - B158DRAFT_1440 0.86 +0.8 1,493,772 + +0.6
Or see this region's nucleotide sequence