Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1351

Experiment: m.b. methylglyoxal 0.005 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1349 and B158DRAFT_1350 overlap by 11 nucleotidesB158DRAFT_1350 and B158DRAFT_1351 are separated by 23 nucleotidesB158DRAFT_1351 and B158DRAFT_1352 overlap by 4 nucleotides B158DRAFT_1349: B158DRAFT_1349 - hypothetical protein, at 1,394,772 to 1,395,275 _1349 B158DRAFT_1350: B158DRAFT_1350 - hypothetical protein, at 1,395,265 to 1,395,996 _1350 B158DRAFT_1351: B158DRAFT_1351 - hypothetical protein, at 1,396,020 to 1,396,166 _1351 B158DRAFT_1352: B158DRAFT_1352 - Retron-type reverse transcriptase, at 1,396,163 to 1,397,125 _1352 Position (kb) 1396 1397Strain fitness (log2 ratio) -2 -1 0 1at 1395.105 kb on - strand, within B158DRAFT_1349at 1395.113 kb on + strand, within B158DRAFT_1349at 1395.113 kb on + strand, within B158DRAFT_1349at 1395.113 kb on + strand, within B158DRAFT_1349at 1395.113 kb on + strand, within B158DRAFT_1349at 1395.115 kb on + strand, within B158DRAFT_1349at 1395.121 kb on - strand, within B158DRAFT_1349at 1395.121 kb on - strand, within B158DRAFT_1349at 1395.121 kb on - strand, within B158DRAFT_1349at 1395.123 kb on - strand, within B158DRAFT_1349at 1395.240 kb on - strandat 1395.584 kb on - strand, within B158DRAFT_1350at 1396.032 kb on + strandat 1396.089 kb on - strand, within B158DRAFT_1351at 1396.104 kb on - strand, within B158DRAFT_1351at 1396.107 kb on + strand, within B158DRAFT_1351at 1396.196 kb on + strandat 1396.212 kb on + strandat 1396.277 kb on + strand, within B158DRAFT_1352at 1396.277 kb on + strand, within B158DRAFT_1352at 1396.285 kb on - strand, within B158DRAFT_1352at 1396.494 kb on + strand, within B158DRAFT_1352at 1396.624 kb on - strand, within B158DRAFT_1352at 1396.641 kb on + strand, within B158DRAFT_1352at 1396.641 kb on + strand, within B158DRAFT_1352at 1396.944 kb on + strand, within B158DRAFT_1352at 1396.944 kb on + strand, within B158DRAFT_1352at 1396.944 kb on + strand, within B158DRAFT_1352at 1397.078 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. methylglyoxal 0.005 vol%
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1,395,105 - B158DRAFT_1349 0.66 +0.6
1,395,113 + B158DRAFT_1349 0.68 +0.2
1,395,113 + B158DRAFT_1349 0.68 -0.5
1,395,113 + B158DRAFT_1349 0.68 +0.1
1,395,113 + B158DRAFT_1349 0.68 +1.1
1,395,115 + B158DRAFT_1349 0.68 +0.6
1,395,121 - B158DRAFT_1349 0.69 -0.4
1,395,121 - B158DRAFT_1349 0.69 +1.2
1,395,121 - B158DRAFT_1349 0.69 -2.7
1,395,123 - B158DRAFT_1349 0.70 +0.3
1,395,240 - +0.9
1,395,584 - B158DRAFT_1350 0.44 +1.3
1,396,032 + -0.3
1,396,089 - B158DRAFT_1351 0.47 -0.2
1,396,104 - B158DRAFT_1351 0.57 +0.4
1,396,107 + B158DRAFT_1351 0.59 +0.8
1,396,196 + -0.6
1,396,212 + +0.7
1,396,277 + B158DRAFT_1352 0.12 +1.1
1,396,277 + B158DRAFT_1352 0.12 +0.5
1,396,285 - B158DRAFT_1352 0.13 +0.8
1,396,494 + B158DRAFT_1352 0.34 +1.7
1,396,624 - B158DRAFT_1352 0.48 +0.6
1,396,641 + B158DRAFT_1352 0.50 +0.5
1,396,641 + B158DRAFT_1352 0.50 -0.2
1,396,944 + B158DRAFT_1352 0.81 +1.0
1,396,944 + B158DRAFT_1352 0.81 -0.7
1,396,944 + B158DRAFT_1352 0.81 +0.5
1,397,078 - +0.6

Or see this region's nucleotide sequence