Experiment: m.b. methylglyoxal 0.005 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1236 and B158DRAFT_1237 are separated by 11 nucleotides B158DRAFT_1237 and B158DRAFT_1238 are separated by 29 nucleotides
B158DRAFT_1236: B158DRAFT_1236 - hypothetical protein, at 1,273,935 to 1,275,020
_1236
B158DRAFT_1237: B158DRAFT_1237 - hypothetical protein, at 1,275,032 to 1,275,466
_1237
B158DRAFT_1238: B158DRAFT_1238 - Asparaginase, at 1,275,496 to 1,276,518
_1238
Position (kb)
1275
1276 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1274.083 kb on + strand, within B158DRAFT_1236 at 1274.244 kb on + strand, within B158DRAFT_1236 at 1274.420 kb on + strand, within B158DRAFT_1236 at 1274.433 kb on - strand, within B158DRAFT_1236 at 1274.594 kb on + strand, within B158DRAFT_1236 at 1274.602 kb on - strand, within B158DRAFT_1236 at 1274.711 kb on + strand, within B158DRAFT_1236 at 1274.727 kb on - strand, within B158DRAFT_1236 at 1274.727 kb on - strand, within B158DRAFT_1236 at 1274.745 kb on - strand, within B158DRAFT_1236 at 1274.872 kb on + strand, within B158DRAFT_1236 at 1274.878 kb on + strand, within B158DRAFT_1236 at 1275.015 kb on + strand at 1275.244 kb on + strand, within B158DRAFT_1237 at 1275.244 kb on + strand, within B158DRAFT_1237 at 1275.244 kb on + strand, within B158DRAFT_1237 at 1275.252 kb on - strand, within B158DRAFT_1237 at 1275.252 kb on - strand, within B158DRAFT_1237 at 1275.310 kb on - strand, within B158DRAFT_1237 at 1275.337 kb on + strand, within B158DRAFT_1237 at 1275.337 kb on + strand, within B158DRAFT_1237 at 1275.344 kb on - strand, within B158DRAFT_1237 at 1275.386 kb on - strand, within B158DRAFT_1237 at 1275.526 kb on - strand at 1275.548 kb on + strand at 1275.548 kb on + strand at 1275.566 kb on + strand at 1275.568 kb on + strand at 1275.634 kb on - strand, within B158DRAFT_1238 at 1275.640 kb on - strand, within B158DRAFT_1238 at 1275.676 kb on + strand, within B158DRAFT_1238 at 1275.684 kb on - strand, within B158DRAFT_1238 at 1275.684 kb on - strand, within B158DRAFT_1238 at 1275.684 kb on - strand, within B158DRAFT_1238 at 1275.723 kb on - strand, within B158DRAFT_1238 at 1275.774 kb on + strand, within B158DRAFT_1238 at 1275.848 kb on + strand, within B158DRAFT_1238 at 1275.854 kb on - strand, within B158DRAFT_1238 at 1275.888 kb on + strand, within B158DRAFT_1238 at 1275.888 kb on + strand, within B158DRAFT_1238 at 1275.896 kb on - strand, within B158DRAFT_1238 at 1275.948 kb on + strand, within B158DRAFT_1238 at 1275.994 kb on - strand, within B158DRAFT_1238 at 1276.038 kb on - strand, within B158DRAFT_1238 at 1276.058 kb on - strand, within B158DRAFT_1238 at 1276.210 kb on + strand, within B158DRAFT_1238 at 1276.222 kb on + strand, within B158DRAFT_1238 at 1276.232 kb on + strand, within B158DRAFT_1238 at 1276.349 kb on + strand, within B158DRAFT_1238 at 1276.349 kb on + strand, within B158DRAFT_1238 at 1276.349 kb on + strand, within B158DRAFT_1238 at 1276.349 kb on + strand, within B158DRAFT_1238 at 1276.349 kb on + strand, within B158DRAFT_1238 at 1276.357 kb on - strand, within B158DRAFT_1238 at 1276.357 kb on - strand, within B158DRAFT_1238 at 1276.357 kb on - strand, within B158DRAFT_1238 at 1276.357 kb on - strand, within B158DRAFT_1238 at 1276.357 kb on - strand, within B158DRAFT_1238 at 1276.357 kb on - strand, within B158DRAFT_1238 at 1276.376 kb on + strand, within B158DRAFT_1238 at 1276.403 kb on - strand, within B158DRAFT_1238 at 1276.414 kb on + strand, within B158DRAFT_1238 at 1276.424 kb on + strand at 1276.424 kb on + strand at 1276.432 kb on - strand at 1276.439 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. methylglyoxal 0.005 vol% remove 1,274,083 + B158DRAFT_1236 0.14 -1.0 1,274,244 + B158DRAFT_1236 0.28 -0.1 1,274,420 + B158DRAFT_1236 0.45 +0.6 1,274,433 - B158DRAFT_1236 0.46 -0.2 1,274,594 + B158DRAFT_1236 0.61 +0.2 1,274,602 - B158DRAFT_1236 0.61 +0.2 1,274,711 + B158DRAFT_1236 0.71 -0.8 1,274,727 - B158DRAFT_1236 0.73 +0.8 1,274,727 - B158DRAFT_1236 0.73 +0.6 1,274,745 - B158DRAFT_1236 0.75 -1.0 1,274,872 + B158DRAFT_1236 0.86 +0.1 1,274,878 + B158DRAFT_1236 0.87 -0.8 1,275,015 + +0.3 1,275,244 + B158DRAFT_1237 0.49 -0.1 1,275,244 + B158DRAFT_1237 0.49 +0.7 1,275,244 + B158DRAFT_1237 0.49 -1.1 1,275,252 - B158DRAFT_1237 0.51 +0.2 1,275,252 - B158DRAFT_1237 0.51 +0.4 1,275,310 - B158DRAFT_1237 0.64 +0.7 1,275,337 + B158DRAFT_1237 0.70 +0.6 1,275,337 + B158DRAFT_1237 0.70 -1.2 1,275,344 - B158DRAFT_1237 0.72 +0.8 1,275,386 - B158DRAFT_1237 0.81 -0.1 1,275,526 - +1.0 1,275,548 + +0.8 1,275,548 + +0.5 1,275,566 + +0.8 1,275,568 + -0.2 1,275,634 - B158DRAFT_1238 0.13 +0.7 1,275,640 - B158DRAFT_1238 0.14 +0.4 1,275,676 + B158DRAFT_1238 0.18 +2.6 1,275,684 - B158DRAFT_1238 0.18 -1.9 1,275,684 - B158DRAFT_1238 0.18 +0.3 1,275,684 - B158DRAFT_1238 0.18 +0.5 1,275,723 - B158DRAFT_1238 0.22 -0.1 1,275,774 + B158DRAFT_1238 0.27 +0.5 1,275,848 + B158DRAFT_1238 0.34 +0.9 1,275,854 - B158DRAFT_1238 0.35 -0.4 1,275,888 + B158DRAFT_1238 0.38 +1.1 1,275,888 + B158DRAFT_1238 0.38 +0.6 1,275,896 - B158DRAFT_1238 0.39 +0.7 1,275,948 + B158DRAFT_1238 0.44 +0.8 1,275,994 - B158DRAFT_1238 0.49 -0.4 1,276,038 - B158DRAFT_1238 0.53 -0.4 1,276,058 - B158DRAFT_1238 0.55 -0.3 1,276,210 + B158DRAFT_1238 0.70 +0.2 1,276,222 + B158DRAFT_1238 0.71 +0.6 1,276,232 + B158DRAFT_1238 0.72 +1.0 1,276,349 + B158DRAFT_1238 0.83 -0.1 1,276,349 + B158DRAFT_1238 0.83 -0.6 1,276,349 + B158DRAFT_1238 0.83 -0.2 1,276,349 + B158DRAFT_1238 0.83 +0.5 1,276,349 + B158DRAFT_1238 0.83 -0.3 1,276,357 - B158DRAFT_1238 0.84 -0.9 1,276,357 - B158DRAFT_1238 0.84 +0.9 1,276,357 - B158DRAFT_1238 0.84 +0.4 1,276,357 - B158DRAFT_1238 0.84 +0.7 1,276,357 - B158DRAFT_1238 0.84 +0.1 1,276,357 - B158DRAFT_1238 0.84 -1.1 1,276,376 + B158DRAFT_1238 0.86 +0.4 1,276,403 - B158DRAFT_1238 0.89 +0.4 1,276,414 + B158DRAFT_1238 0.90 +0.2 1,276,424 + +0.4 1,276,424 + -2.3 1,276,432 - +1.1 1,276,439 - -1.0
Or see this region's nucleotide sequence