Experiment: m.b. methylglyoxal 0.005 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1003 and B158DRAFT_1004 overlap by 8 nucleotides B158DRAFT_1004 and B158DRAFT_1005 are separated by 2 nucleotides
B158DRAFT_1003: B158DRAFT_1003 - Mg-chelatase subunit ChlD, at 1,043,817 to 1,044,857
_1003
B158DRAFT_1004: B158DRAFT_1004 - hypothetical protein, at 1,044,850 to 1,045,392
_1004
B158DRAFT_1005: B158DRAFT_1005 - Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain), at 1,045,395 to 1,046,387
_1005
Position (kb)
1044
1045
1046 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1043.860 kb on - strand at 1043.981 kb on - strand, within B158DRAFT_1003 at 1043.995 kb on + strand, within B158DRAFT_1003 at 1043.995 kb on + strand, within B158DRAFT_1003 at 1043.995 kb on + strand, within B158DRAFT_1003 at 1043.995 kb on + strand, within B158DRAFT_1003 at 1044.003 kb on - strand, within B158DRAFT_1003 at 1044.035 kb on + strand, within B158DRAFT_1003 at 1044.043 kb on - strand, within B158DRAFT_1003 at 1044.218 kb on + strand, within B158DRAFT_1003 at 1044.223 kb on + strand, within B158DRAFT_1003 at 1044.223 kb on - strand, within B158DRAFT_1003 at 1044.247 kb on + strand, within B158DRAFT_1003 at 1044.247 kb on + strand, within B158DRAFT_1003 at 1044.247 kb on + strand, within B158DRAFT_1003 at 1044.247 kb on + strand, within B158DRAFT_1003 at 1044.247 kb on + strand, within B158DRAFT_1003 at 1044.247 kb on + strand, within B158DRAFT_1003 at 1044.247 kb on + strand, within B158DRAFT_1003 at 1044.247 kb on + strand, within B158DRAFT_1003 at 1044.247 kb on + strand, within B158DRAFT_1003 at 1044.255 kb on - strand, within B158DRAFT_1003 at 1044.255 kb on - strand, within B158DRAFT_1003 at 1044.255 kb on - strand, within B158DRAFT_1003 at 1044.255 kb on - strand, within B158DRAFT_1003 at 1044.255 kb on - strand, within B158DRAFT_1003 at 1044.255 kb on - strand, within B158DRAFT_1003 at 1044.255 kb on - strand, within B158DRAFT_1003 at 1044.255 kb on - strand, within B158DRAFT_1003 at 1044.323 kb on + strand, within B158DRAFT_1003 at 1044.323 kb on + strand, within B158DRAFT_1003 at 1044.323 kb on + strand, within B158DRAFT_1003 at 1044.323 kb on + strand, within B158DRAFT_1003 at 1044.323 kb on + strand, within B158DRAFT_1003 at 1044.324 kb on + strand, within B158DRAFT_1003 at 1044.324 kb on + strand, within B158DRAFT_1003 at 1044.331 kb on - strand, within B158DRAFT_1003 at 1044.331 kb on - strand, within B158DRAFT_1003 at 1044.331 kb on - strand, within B158DRAFT_1003 at 1044.331 kb on - strand, within B158DRAFT_1003 at 1044.363 kb on - strand, within B158DRAFT_1003 at 1044.363 kb on - strand, within B158DRAFT_1003 at 1044.365 kb on + strand, within B158DRAFT_1003 at 1044.365 kb on + strand, within B158DRAFT_1003 at 1044.365 kb on + strand, within B158DRAFT_1003 at 1044.365 kb on + strand, within B158DRAFT_1003 at 1044.373 kb on - strand, within B158DRAFT_1003 at 1044.373 kb on - strand, within B158DRAFT_1003 at 1044.390 kb on + strand, within B158DRAFT_1003 at 1044.390 kb on + strand, within B158DRAFT_1003 at 1044.390 kb on + strand, within B158DRAFT_1003 at 1044.398 kb on - strand, within B158DRAFT_1003 at 1044.400 kb on - strand, within B158DRAFT_1003 at 1044.431 kb on + strand, within B158DRAFT_1003 at 1044.431 kb on - strand, within B158DRAFT_1003 at 1044.453 kb on + strand, within B158DRAFT_1003 at 1044.472 kb on + strand, within B158DRAFT_1003 at 1044.472 kb on + strand, within B158DRAFT_1003 at 1044.492 kb on - strand, within B158DRAFT_1003 at 1044.522 kb on - strand, within B158DRAFT_1003 at 1044.637 kb on - strand, within B158DRAFT_1003 at 1044.641 kb on - strand, within B158DRAFT_1003 at 1044.643 kb on - strand, within B158DRAFT_1003 at 1044.643 kb on - strand, within B158DRAFT_1003 at 1044.643 kb on - strand, within B158DRAFT_1003 at 1044.693 kb on + strand, within B158DRAFT_1003 at 1044.773 kb on + strand at 1044.781 kb on - strand at 1044.788 kb on + strand at 1044.894 kb on + strand at 1044.911 kb on + strand, within B158DRAFT_1004 at 1044.919 kb on - strand, within B158DRAFT_1004 at 1044.937 kb on + strand, within B158DRAFT_1004 at 1044.937 kb on + strand, within B158DRAFT_1004 at 1044.978 kb on + strand, within B158DRAFT_1004 at 1044.978 kb on + strand, within B158DRAFT_1004 at 1044.978 kb on + strand, within B158DRAFT_1004 at 1044.978 kb on + strand, within B158DRAFT_1004 at 1044.986 kb on - strand, within B158DRAFT_1004 at 1044.986 kb on - strand, within B158DRAFT_1004 at 1044.986 kb on - strand, within B158DRAFT_1004 at 1044.986 kb on - strand, within B158DRAFT_1004 at 1044.993 kb on + strand, within B158DRAFT_1004 at 1045.000 kb on + strand, within B158DRAFT_1004 at 1045.020 kb on + strand, within B158DRAFT_1004 at 1045.037 kb on + strand, within B158DRAFT_1004 at 1045.037 kb on + strand, within B158DRAFT_1004 at 1045.037 kb on + strand, within B158DRAFT_1004 at 1045.037 kb on + strand, within B158DRAFT_1004 at 1045.037 kb on + strand, within B158DRAFT_1004 at 1045.045 kb on - strand, within B158DRAFT_1004 at 1045.068 kb on + strand, within B158DRAFT_1004 at 1045.133 kb on - strand, within B158DRAFT_1004 at 1045.173 kb on - strand, within B158DRAFT_1004 at 1045.258 kb on + strand, within B158DRAFT_1004 at 1045.349 kb on - strand at 1045.387 kb on + strand at 1045.387 kb on + strand at 1045.466 kb on + strand at 1045.489 kb on + strand at 1045.489 kb on + strand at 1045.502 kb on - strand, within B158DRAFT_1005 at 1045.568 kb on + strand, within B158DRAFT_1005 at 1045.574 kb on + strand, within B158DRAFT_1005 at 1045.584 kb on + strand, within B158DRAFT_1005 at 1045.591 kb on + strand, within B158DRAFT_1005 at 1045.591 kb on + strand, within B158DRAFT_1005 at 1045.689 kb on - strand, within B158DRAFT_1005 at 1045.689 kb on - strand, within B158DRAFT_1005 at 1045.691 kb on + strand, within B158DRAFT_1005 at 1045.694 kb on - strand, within B158DRAFT_1005 at 1045.699 kb on - strand, within B158DRAFT_1005 at 1045.791 kb on + strand, within B158DRAFT_1005 at 1045.791 kb on + strand, within B158DRAFT_1005 at 1045.872 kb on - strand, within B158DRAFT_1005 at 1045.874 kb on + strand, within B158DRAFT_1005 at 1045.874 kb on + strand, within B158DRAFT_1005 at 1045.882 kb on - strand, within B158DRAFT_1005 at 1045.884 kb on + strand, within B158DRAFT_1005 at 1045.892 kb on - strand, within B158DRAFT_1005 at 1045.892 kb on - strand, within B158DRAFT_1005 at 1045.895 kb on + strand, within B158DRAFT_1005 at 1045.895 kb on + strand, within B158DRAFT_1005 at 1045.903 kb on - strand, within B158DRAFT_1005 at 1045.904 kb on - strand, within B158DRAFT_1005 at 1045.943 kb on + strand, within B158DRAFT_1005 at 1045.951 kb on + strand, within B158DRAFT_1005 at 1045.951 kb on + strand, within B158DRAFT_1005 at 1045.951 kb on + strand, within B158DRAFT_1005 at 1045.951 kb on + strand, within B158DRAFT_1005 at 1045.951 kb on + strand, within B158DRAFT_1005 at 1045.953 kb on + strand, within B158DRAFT_1005 at 1045.953 kb on + strand, within B158DRAFT_1005 at 1045.953 kb on + strand, within B158DRAFT_1005 at 1045.953 kb on + strand, within B158DRAFT_1005 at 1045.953 kb on + strand, within B158DRAFT_1005 at 1045.953 kb on + strand, within B158DRAFT_1005 at 1045.953 kb on + strand, within B158DRAFT_1005 at 1045.953 kb on + strand, within B158DRAFT_1005 at 1045.953 kb on + strand, within B158DRAFT_1005 at 1045.953 kb on + strand, within B158DRAFT_1005 at 1045.953 kb on + strand, within B158DRAFT_1005 at 1045.953 kb on + strand, within B158DRAFT_1005 at 1045.953 kb on + strand, within B158DRAFT_1005 at 1045.953 kb on + strand, within B158DRAFT_1005 at 1045.959 kb on - strand, within B158DRAFT_1005 at 1045.959 kb on - strand, within B158DRAFT_1005 at 1045.959 kb on - strand, within B158DRAFT_1005 at 1045.959 kb on - strand, within B158DRAFT_1005 at 1045.959 kb on - strand, within B158DRAFT_1005 at 1045.961 kb on - strand, within B158DRAFT_1005 at 1045.961 kb on - strand, within B158DRAFT_1005 at 1045.961 kb on - strand, within B158DRAFT_1005 at 1045.961 kb on - strand, within B158DRAFT_1005 at 1045.961 kb on - strand, within B158DRAFT_1005 at 1045.961 kb on - strand, within B158DRAFT_1005 at 1045.961 kb on - strand, within B158DRAFT_1005 at 1045.961 kb on - strand, within B158DRAFT_1005 at 1045.961 kb on - strand, within B158DRAFT_1005 at 1045.961 kb on - strand, within B158DRAFT_1005 at 1045.961 kb on - strand, within B158DRAFT_1005 at 1045.961 kb on - strand, within B158DRAFT_1005 at 1045.961 kb on - strand, within B158DRAFT_1005 at 1045.961 kb on - strand, within B158DRAFT_1005 at 1045.961 kb on - strand, within B158DRAFT_1005 at 1045.961 kb on - strand, within B158DRAFT_1005 at 1045.961 kb on - strand, within B158DRAFT_1005 at 1045.983 kb on + strand, within B158DRAFT_1005 at 1046.022 kb on + strand, within B158DRAFT_1005 at 1046.022 kb on + strand, within B158DRAFT_1005 at 1046.030 kb on - strand, within B158DRAFT_1005 at 1046.030 kb on - strand, within B158DRAFT_1005 at 1046.035 kb on - strand, within B158DRAFT_1005 at 1046.069 kb on - strand, within B158DRAFT_1005 at 1046.153 kb on - strand, within B158DRAFT_1005 at 1046.189 kb on + strand, within B158DRAFT_1005 at 1046.235 kb on + strand, within B158DRAFT_1005 at 1046.245 kb on + strand, within B158DRAFT_1005 at 1046.282 kb on + strand, within B158DRAFT_1005 at 1046.304 kb on + strand at 1046.312 kb on - strand at 1046.313 kb on + strand at 1046.324 kb on + strand at 1046.324 kb on + strand at 1046.324 kb on + strand at 1046.324 kb on + strand at 1046.332 kb on - strand at 1046.332 kb on - strand at 1046.332 kb on - strand at 1046.332 kb on - strand at 1046.332 kb on - strand at 1046.332 kb on - strand at 1046.332 kb on - strand at 1046.336 kb on + strand at 1046.337 kb on - strand at 1046.344 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. methylglyoxal 0.005 vol% remove 1,043,860 - -0.6 1,043,981 - B158DRAFT_1003 0.16 +0.5 1,043,995 + B158DRAFT_1003 0.17 -0.4 1,043,995 + B158DRAFT_1003 0.17 +0.0 1,043,995 + B158DRAFT_1003 0.17 -0.8 1,043,995 + B158DRAFT_1003 0.17 -0.6 1,044,003 - B158DRAFT_1003 0.18 -0.8 1,044,035 + B158DRAFT_1003 0.21 +0.0 1,044,043 - B158DRAFT_1003 0.22 -1.4 1,044,218 + B158DRAFT_1003 0.39 -3.3 1,044,223 + B158DRAFT_1003 0.39 -0.5 1,044,223 - B158DRAFT_1003 0.39 +0.3 1,044,247 + B158DRAFT_1003 0.41 -0.2 1,044,247 + B158DRAFT_1003 0.41 +1.9 1,044,247 + B158DRAFT_1003 0.41 -1.2 1,044,247 + B158DRAFT_1003 0.41 -0.1 1,044,247 + B158DRAFT_1003 0.41 +0.3 1,044,247 + B158DRAFT_1003 0.41 -0.1 1,044,247 + B158DRAFT_1003 0.41 -0.8 1,044,247 + B158DRAFT_1003 0.41 -0.5 1,044,247 + B158DRAFT_1003 0.41 -0.1 1,044,255 - B158DRAFT_1003 0.42 +0.3 1,044,255 - B158DRAFT_1003 0.42 +0.4 1,044,255 - B158DRAFT_1003 0.42 -0.0 1,044,255 - B158DRAFT_1003 0.42 -0.4 1,044,255 - B158DRAFT_1003 0.42 -0.6 1,044,255 - B158DRAFT_1003 0.42 -1.0 1,044,255 - B158DRAFT_1003 0.42 +0.4 1,044,255 - B158DRAFT_1003 0.42 -0.6 1,044,323 + B158DRAFT_1003 0.49 -1.7 1,044,323 + B158DRAFT_1003 0.49 +1.3 1,044,323 + B158DRAFT_1003 0.49 -0.3 1,044,323 + B158DRAFT_1003 0.49 -3.9 1,044,323 + B158DRAFT_1003 0.49 +0.4 1,044,324 + B158DRAFT_1003 0.49 +1.1 1,044,324 + B158DRAFT_1003 0.49 +0.1 1,044,331 - B158DRAFT_1003 0.49 -0.8 1,044,331 - B158DRAFT_1003 0.49 -0.4 1,044,331 - B158DRAFT_1003 0.49 -0.4 1,044,331 - B158DRAFT_1003 0.49 +0.4 1,044,363 - B158DRAFT_1003 0.52 -1.0 1,044,363 - B158DRAFT_1003 0.52 -0.0 1,044,365 + B158DRAFT_1003 0.53 -1.6 1,044,365 + B158DRAFT_1003 0.53 +0.1 1,044,365 + B158DRAFT_1003 0.53 -2.0 1,044,365 + B158DRAFT_1003 0.53 +0.2 1,044,373 - B158DRAFT_1003 0.53 -3.9 1,044,373 - B158DRAFT_1003 0.53 +0.3 1,044,390 + B158DRAFT_1003 0.55 -0.7 1,044,390 + B158DRAFT_1003 0.55 -0.1 1,044,390 + B158DRAFT_1003 0.55 -0.7 1,044,398 - B158DRAFT_1003 0.56 -0.4 1,044,400 - B158DRAFT_1003 0.56 -3.0 1,044,431 + B158DRAFT_1003 0.59 -2.8 1,044,431 - B158DRAFT_1003 0.59 +0.1 1,044,453 + B158DRAFT_1003 0.61 +0.2 1,044,472 + B158DRAFT_1003 0.63 -0.5 1,044,472 + B158DRAFT_1003 0.63 +0.5 1,044,492 - B158DRAFT_1003 0.65 -0.7 1,044,522 - B158DRAFT_1003 0.68 -0.0 1,044,637 - B158DRAFT_1003 0.79 -0.7 1,044,641 - B158DRAFT_1003 0.79 +1.3 1,044,643 - B158DRAFT_1003 0.79 +0.1 1,044,643 - B158DRAFT_1003 0.79 -0.8 1,044,643 - B158DRAFT_1003 0.79 +0.7 1,044,693 + B158DRAFT_1003 0.84 +0.2 1,044,773 + -4.2 1,044,781 - +0.3 1,044,788 + +0.4 1,044,894 + +0.6 1,044,911 + B158DRAFT_1004 0.11 -1.0 1,044,919 - B158DRAFT_1004 0.13 +1.2 1,044,937 + B158DRAFT_1004 0.16 +0.2 1,044,937 + B158DRAFT_1004 0.16 +0.1 1,044,978 + B158DRAFT_1004 0.24 -0.6 1,044,978 + B158DRAFT_1004 0.24 -0.0 1,044,978 + B158DRAFT_1004 0.24 -3.4 1,044,978 + B158DRAFT_1004 0.24 -2.0 1,044,986 - B158DRAFT_1004 0.25 -2.1 1,044,986 - B158DRAFT_1004 0.25 -1.3 1,044,986 - B158DRAFT_1004 0.25 +0.4 1,044,986 - B158DRAFT_1004 0.25 -1.4 1,044,993 + B158DRAFT_1004 0.26 +0.3 1,045,000 + B158DRAFT_1004 0.28 -0.1 1,045,020 + B158DRAFT_1004 0.31 +0.2 1,045,037 + B158DRAFT_1004 0.34 -0.1 1,045,037 + B158DRAFT_1004 0.34 +0.4 1,045,037 + B158DRAFT_1004 0.34 +0.2 1,045,037 + B158DRAFT_1004 0.34 +0.3 1,045,037 + B158DRAFT_1004 0.34 -0.8 1,045,045 - B158DRAFT_1004 0.36 -0.4 1,045,068 + B158DRAFT_1004 0.40 -1.2 1,045,133 - B158DRAFT_1004 0.52 -0.1 1,045,173 - B158DRAFT_1004 0.59 -1.5 1,045,258 + B158DRAFT_1004 0.75 +0.6 1,045,349 - -0.1 1,045,387 + +0.5 1,045,387 + +0.2 1,045,466 + +0.9 1,045,489 + -1.7 1,045,489 + -0.6 1,045,502 - B158DRAFT_1005 0.11 +0.4 1,045,568 + B158DRAFT_1005 0.17 -0.9 1,045,574 + B158DRAFT_1005 0.18 +0.5 1,045,584 + B158DRAFT_1005 0.19 -4.4 1,045,591 + B158DRAFT_1005 0.20 -0.2 1,045,591 + B158DRAFT_1005 0.20 -0.4 1,045,689 - B158DRAFT_1005 0.30 -0.1 1,045,689 - B158DRAFT_1005 0.30 +1.2 1,045,691 + B158DRAFT_1005 0.30 -1.2 1,045,694 - B158DRAFT_1005 0.30 +0.2 1,045,699 - B158DRAFT_1005 0.31 -0.5 1,045,791 + B158DRAFT_1005 0.40 -0.7 1,045,791 + B158DRAFT_1005 0.40 -0.8 1,045,872 - B158DRAFT_1005 0.48 -1.4 1,045,874 + B158DRAFT_1005 0.48 +0.7 1,045,874 + B158DRAFT_1005 0.48 -0.0 1,045,882 - B158DRAFT_1005 0.49 +0.8 1,045,884 + B158DRAFT_1005 0.49 -1.2 1,045,892 - B158DRAFT_1005 0.50 +0.4 1,045,892 - B158DRAFT_1005 0.50 -2.3 1,045,895 + B158DRAFT_1005 0.50 -0.5 1,045,895 + B158DRAFT_1005 0.50 -0.0 1,045,903 - B158DRAFT_1005 0.51 +0.2 1,045,904 - B158DRAFT_1005 0.51 +0.5 1,045,943 + B158DRAFT_1005 0.55 -0.7 1,045,951 + B158DRAFT_1005 0.56 -0.4 1,045,951 + B158DRAFT_1005 0.56 -3.5 1,045,951 + B158DRAFT_1005 0.56 +0.2 1,045,951 + B158DRAFT_1005 0.56 -2.6 1,045,951 + B158DRAFT_1005 0.56 +0.8 1,045,953 + B158DRAFT_1005 0.56 +0.3 1,045,953 + B158DRAFT_1005 0.56 +0.7 1,045,953 + B158DRAFT_1005 0.56 +0.0 1,045,953 + B158DRAFT_1005 0.56 +0.2 1,045,953 + B158DRAFT_1005 0.56 -0.3 1,045,953 + B158DRAFT_1005 0.56 +0.1 1,045,953 + B158DRAFT_1005 0.56 -0.7 1,045,953 + B158DRAFT_1005 0.56 -2.6 1,045,953 + B158DRAFT_1005 0.56 -1.0 1,045,953 + B158DRAFT_1005 0.56 +0.4 1,045,953 + B158DRAFT_1005 0.56 -0.6 1,045,953 + B158DRAFT_1005 0.56 +0.8 1,045,953 + B158DRAFT_1005 0.56 +0.2 1,045,953 + B158DRAFT_1005 0.56 -0.0 1,045,959 - B158DRAFT_1005 0.57 +0.3 1,045,959 - B158DRAFT_1005 0.57 -0.9 1,045,959 - B158DRAFT_1005 0.57 -0.3 1,045,959 - B158DRAFT_1005 0.57 -0.9 1,045,959 - B158DRAFT_1005 0.57 -0.1 1,045,961 - B158DRAFT_1005 0.57 -2.2 1,045,961 - B158DRAFT_1005 0.57 -0.0 1,045,961 - B158DRAFT_1005 0.57 -1.4 1,045,961 - B158DRAFT_1005 0.57 -0.8 1,045,961 - B158DRAFT_1005 0.57 -0.1 1,045,961 - B158DRAFT_1005 0.57 -0.3 1,045,961 - B158DRAFT_1005 0.57 -0.4 1,045,961 - B158DRAFT_1005 0.57 -0.1 1,045,961 - B158DRAFT_1005 0.57 -0.4 1,045,961 - B158DRAFT_1005 0.57 -3.0 1,045,961 - B158DRAFT_1005 0.57 +0.5 1,045,961 - B158DRAFT_1005 0.57 -0.7 1,045,961 - B158DRAFT_1005 0.57 +1.3 1,045,961 - B158DRAFT_1005 0.57 -0.5 1,045,961 - B158DRAFT_1005 0.57 -0.9 1,045,961 - B158DRAFT_1005 0.57 -1.7 1,045,961 - B158DRAFT_1005 0.57 -2.1 1,045,983 + B158DRAFT_1005 0.59 +0.2 1,046,022 + B158DRAFT_1005 0.63 -1.5 1,046,022 + B158DRAFT_1005 0.63 +0.2 1,046,030 - B158DRAFT_1005 0.64 -0.4 1,046,030 - B158DRAFT_1005 0.64 -0.1 1,046,035 - B158DRAFT_1005 0.64 -0.5 1,046,069 - B158DRAFT_1005 0.68 +0.3 1,046,153 - B158DRAFT_1005 0.76 -0.4 1,046,189 + B158DRAFT_1005 0.80 -0.1 1,046,235 + B158DRAFT_1005 0.85 -0.6 1,046,245 + B158DRAFT_1005 0.86 +0.2 1,046,282 + B158DRAFT_1005 0.89 +0.4 1,046,304 + -0.5 1,046,312 - +0.6 1,046,313 + +0.1 1,046,324 + -2.7 1,046,324 + +0.7 1,046,324 + +1.2 1,046,324 + -1.2 1,046,332 - -0.7 1,046,332 - -3.3 1,046,332 - -0.1 1,046,332 - -2.2 1,046,332 - +1.2 1,046,332 - -0.0 1,046,332 - -3.0 1,046,336 + -0.2 1,046,337 - -0.2 1,046,344 - -1.2
Or see this region's nucleotide sequence